RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 BEND3Q5T5X7 828 aa15.73■□□□□ 0.11
PDGFRA-204ENST00000504461 SLC4A10Q6U841 1118 aa15.73■□□□□ 0.11
PDGFRA-204ENST00000504461 KRT26Q7Z3Y9 468 aa15.73■□□□□ 0.11
PDGFRA-204ENST00000504461 SAPCD2Q86UD0 394 aa15.73■□□□□ 0.11
PDGFRA-204ENST00000504461 BEGAINQ9BUH8 593 aa15.73■□□□□ 0.11
PDGFRA-204ENST00000504461 WTIPA6NIX2 430 aaPredicted RBP15.72■□□□□ 0.11
PDGFRA-204ENST00000504461 KCNJ4P48050 445 aa15.72■□□□□ 0.11
PDGFRA-204ENST00000504461 IFIT5Q13325 482 aaKnown RBP15.72■□□□□ 0.11
PDGFRA-204ENST00000504461 TRMT2AQ8IZ69 625 aaKnown RBP15.72■□□□□ 0.11
PDGFRA-204ENST00000504461 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
PDGFRA-204ENST00000504461 C9orf78Q9NZ63 289 aaPredicted RBP15.72■□□□□ 0.11
PDGFRA-204ENST00000504461 ZNF804BA4D1E1 1349 aa15.71■□□□□ 0.11
PDGFRA-204ENST00000504461 ZNF646O15015 1829 aaPredicted RBP15.71■□□□□ 0.11
PDGFRA-204ENST00000504461 USP17L8P0C7I0 530 aa15.71■□□□□ 0.11
PDGFRA-204ENST00000504461 SULF1Q8IWU6 871 aa15.71■□□□□ 0.11
PDGFRA-204ENST00000504461 HHIPL1Q96JK4 782 aa15.71■□□□□ 0.11
PDGFRA-204ENST00000504461 COA1Q9GZY4 146 aa15.71■□□□□ 0.11
PDGFRA-204ENST00000504461 THSD7BQ9C0I4 1608 aa15.71■□□□□ 0.11
PDGFRA-204ENST00000504461 GRM8O00222 908 aa15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 MAP2K2P36507 400 aa15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 ZNF280AP59817 542 aaPredicted RBP15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 FOXO4P98177 505 aa15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 CHRNDQ07001 517 aa15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 C2orf69Q8N8R5 385 aa15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 SRCIN1Q9C0H9 1055 aa15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 PRDM10Q9NQV6 1147 aa15.7■□□□□ 0.1
PDGFRA-204ENST00000504461 ZNF609O15014 1411 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 ADM5C9JUS6 153 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 CAPN15O75808 1086 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 ALDH1L1O75891 902 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 LBX1P52954 281 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 SCARF1Q14162 830 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 TAF7LQ5H9L4 462 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 LMBR1LQ6UX01 489 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 DLK2Q6UY11 383 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 OGFOD1Q8N543 542 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 MYOZ2Q9NPC6 264 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 GGA3Q9NZ52 723 aa15.69■□□□□ 0.1
PDGFRA-204ENST00000504461 AOC2O75106 756 aa15.68■□□□□ 0.1
PDGFRA-204ENST00000504461 HUNKP57058 714 aa15.68■□□□□ 0.1
PDGFRA-204ENST00000504461 STRIP1Q5VSL9 837 aa15.68■□□□□ 0.1
PDGFRA-204ENST00000504461 ANGEL2Q5VTE6 544 aaKnown RBP15.68■□□□□ 0.1
PDGFRA-204ENST00000504461 TXNRD3Q86VQ6 643 aa15.68■□□□□ 0.1
PDGFRA-204ENST00000504461 GMLQ99445 158 aa15.68■□□□□ 0.1
PDGFRA-204ENST00000504461 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
PDGFRA-204ENST00000504461 AKAP11Q9UKA4 1901 aa15.67■□□□□ 0.1
PDGFRA-204ENST00000504461 TAF5LO75529 589 aa15.67■□□□□ 0.1
PDGFRA-204ENST00000504461 DACT2Q5SW24 774 aa15.67■□□□□ 0.1
PDGFRA-204ENST00000504461 TTLL5Q6EMB2 1281 aa15.67■□□□□ 0.1
PDGFRA-204ENST00000504461 HELBQ8NG08 1087 aaPredicted RBP15.67■□□□□ 0.1
PDGFRA-204ENST00000504461 GBA2Q9HCG7 927 aaPredicted RBP15.67■□□□□ 0.1
PDGFRA-204ENST00000504461 ASTN2O75129 1339 aaPredicted RBP15.67■□□□□ 0.1
PDGFRA-204ENST00000504461 PLIN1O60240 522 aa15.66■□□□□ 0.1
PDGFRA-204ENST00000504461 LDHAL6AQ6ZMR3 332 aa15.66■□□□□ 0.1
PDGFRA-204ENST00000504461 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
PDGFRA-204ENST00000504461 MXD3Q9BW11 206 aa15.66■□□□□ 0.1
PDGFRA-204ENST00000504461 CNNM1Q9NRU3 951 aa15.66■□□□□ 0.1
PDGFRA-204ENST00000504461 ECM29Q5VYK3 1845 aa15.66■□□□□ 0.1
PDGFRA-204ENST00000504461 HSPA8P11142 646 aaKnown RBP15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 KLRK1P26718 216 aa15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 MMP14P50281 582 aa15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 GTF2IP78347 998 aa15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 EPHA10Q5JZY3 1008 aa15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 RGMBQ6NW40 437 aa15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 MRPL50Q8N5N7 158 aaKnown RBP15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 CDCA5Q96FF9 252 aa15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 ZNF594Q96JF6 807 aaPredicted RBP15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 HDAC9Q9UKV0 1011 aa15.65■□□□□ 0.1
PDGFRA-204ENST00000504461 NOGQ13253 232 aa15.64■□□□□ 0.09
PDGFRA-204ENST00000504461 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
PDGFRA-204ENST00000504461 PTPRCP08575 1304 aa15.64■□□□□ 0.09
PDGFRA-204ENST00000504461 PITPNM2Q9BZ72 1349 aa15.64■□□□□ 0.09
PDGFRA-204ENST00000504461 SNAP23O00161 211 aa15.63■□□□□ 0.09
PDGFRA-204ENST00000504461 ZNF157P51786 506 aaPredicted RBP15.63■□□□□ 0.09
PDGFRA-204ENST00000504461 BRPF1P55201 1214 aaPredicted RBP15.63■□□□□ 0.09
PDGFRA-204ENST00000504461 NBPF9Q3BBW0 867 aa15.63■□□□□ 0.09
PDGFRA-204ENST00000504461 ZNF804AQ7Z570 1209 aa15.63■□□□□ 0.09
PDGFRA-204ENST00000504461 CCDC102AQ96A19 550 aa15.63■□□□□ 0.09
PDGFRA-204ENST00000504461 SUCLG2Q96I99 432 aa15.63■□□□□ 0.09
PDGFRA-204ENST00000504461 CA12O43570 354 aa15.62■□□□□ 0.09
PDGFRA-204ENST00000504461 NBPF7P0C2Y1 421 aaPredicted RBP15.62■□□□□ 0.09
PDGFRA-204ENST00000504461 ALDH1L2Q3SY69 923 aa15.62■□□□□ 0.09
PDGFRA-204ENST00000504461 C15orf52Q6ZUT6 534 aaKnown RBP15.62■□□□□ 0.09
PDGFRA-204ENST00000504461 KIAA0825Q8IV33 1275 aa15.62■□□□□ 0.09
PDGFRA-204ENST00000504461 SSH1Q8WYL5 1049 aa15.62■□□□□ 0.09
PDGFRA-204ENST00000504461 CASP8AP2Q9UKL3 1982 aa15.62■□□□□ 0.09
PDGFRA-204ENST00000504461 WNT10BO00744 389 aa15.61■□□□□ 0.09
PDGFRA-204ENST00000504461 SCAF8Q9UPN6 1271 aaKnown RBP15.61■□□□□ 0.09
PDGFRA-204ENST00000504461 PAPPA2Q9BXP8 1791 aa15.61■□□□□ 0.09
PDGFRA-204ENST00000504461 NF2P35240 595 aa15.6■□□□□ 0.09
PDGFRA-204ENST00000504461 TSKSQ9UJT2 592 aa15.6■□□□□ 0.09
PDGFRA-204ENST00000504461 UTYO14607 1347 aa15.6■□□□□ 0.09
PDGFRA-204ENST00000504461 SASH1O94885 1247 aa15.59■□□□□ 0.09
PDGFRA-204ENST00000504461 IL1R1P14778 569 aa15.59■□□□□ 0.09
PDGFRA-204ENST00000504461 FKBP1BP68106 108 aa15.59■□□□□ 0.09
PDGFRA-204ENST00000504461 TTLL12Q14166 644 aaPredicted RBP15.59■□□□□ 0.09
PDGFRA-204ENST00000504461 KAZALD1Q96I82 304 aa15.59■□□□□ 0.09
PDGFRA-204ENST00000504461 BICC1Q9H694 974 aaKnown RBP15.59■□□□□ 0.09
PDGFRA-204ENST00000504461 SMC4Q9NTJ3 1288 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms