RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 ADORA1P30542 326 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 DNAJC5GQ8N7S2 189 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 RHPN1Q8TCX5 695 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 EYA3Q99504 573 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 ZC3H12CQ9C0D7 883 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 RWDD1Q9H446 243 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 DBNDD1Q9H9R9 158 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 IRS2Q9Y4H2 1338 aa16.39■□□□□ 0.21
PDLIM7-212ENST00000504380 GYG1P46976 350 aa16.38■□□□□ 0.21
PDLIM7-212ENST00000504380 KIAA2012Q0VF49 1180 aa16.38■□□□□ 0.21
PDLIM7-212ENST00000504380 UBE4AQ14139 1066 aa16.38■□□□□ 0.21
PDLIM7-212ENST00000504380 PUM3Q15397 648 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-212ENST00000504380 HSP90AB4PQ58FF6 505 aa16.38■□□□□ 0.21
PDLIM7-212ENST00000504380 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
PDLIM7-212ENST00000504380 A0A1B0GUL7 405 aa16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 KIF3CO14782 793 aa16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 RAB11FIP3O75154 756 aa16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 SLC5A1P13866 664 aa16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 TNNI3KQ59H18 835 aa16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 ERC1Q8IUD2 1116 aa16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 CCDC8Q9H0W5 538 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 FPGT-TNNI3KV9GXZ4 949 aa16.37■□□□□ 0.21
PDLIM7-212ENST00000504380 G3V3G9 751 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 BCAMP50895 628 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 DCAF8Q5TAQ9 597 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 B4GALNT3Q6L9W6 998 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 LPIN2Q92539 896 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 EAF2Q96CJ1 260 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 KIF1BPQ96EK5 621 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 FAM84BQ96KN1 310 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 KCNQ5Q9NR82 932 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 MED23Q9ULK4 1368 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 ZNF609O15014 1411 aa16.36■□□□□ 0.21
PDLIM7-212ENST00000504380 ECE2O60344 883 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 APLP1P51693 650 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 AACSQ86V21 672 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 NIM1KQ8IY84 436 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 XAGE2Q96GT9 111 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 IQSEC3Q9UPP2 1182 aaPredicted RBP16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 AKAP2Q9Y2D5 859 aa16.35■□□□□ 0.21
PDLIM7-212ENST00000504380 YDJCA8MPS7 323 aa16.34■□□□□ 0.21
PDLIM7-212ENST00000504380 ANKRD45Q5TZF3 282 aa16.34■□□□□ 0.21
PDLIM7-212ENST00000504380 C15orf52Q6ZUT6 534 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-212ENST00000504380 JDP2Q8WYK2 163 aa16.34■□□□□ 0.21
PDLIM7-212ENST00000504380 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.21
PDLIM7-212ENST00000504380 RAD17O75943 681 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 HIBADHP31937 336 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 PHKA1P46020 1223 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 FBXO33Q7Z6M2 555 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 C16orf71Q8IYS4 520 aaPredicted RBP16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 VPS33BQ9H267 617 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 CD209Q9NNX6 404 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 GPR108Q9NPR9 543 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 JAG2Q9Y219 1238 aa16.33■□□□□ 0.2
PDLIM7-212ENST00000504380 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 ZNF804AQ7Z570 1209 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 VPS37DQ86XT2 251 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 TIAM2Q8IVF5 1701 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 SMC5Q8IY18 1101 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 CLASRPQ8N2M8 674 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 FBXW7Q969H0 707 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 ZNF541Q9H0D2 1346 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 DBNLQ9UJU6 430 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
PDLIM7-212ENST00000504380 ARAP2Q8WZ64 1704 aa16.31■□□□□ 0.2
PDLIM7-212ENST00000504380 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
PDLIM7-212ENST00000504380 CCDC102BQ68D86 513 aa16.31■□□□□ 0.2
PDLIM7-212ENST00000504380 CCDC136Q96JN2 1154 aa16.31■□□□□ 0.2
PDLIM7-212ENST00000504380 MXD3Q9BW11 206 aa16.31■□□□□ 0.2
PDLIM7-212ENST00000504380 SCN9AQ15858 1988 aa16.31■□□□□ 0.2
PDLIM7-212ENST00000504380 FZD9O00144 591 aa16.3■□□□□ 0.2
PDLIM7-212ENST00000504380 IFIT2P09913 472 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-212ENST00000504380 CXCL9Q07325 125 aa16.3■□□□□ 0.2
PDLIM7-212ENST00000504380 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-212ENST00000504380 LNPKQ9C0E8 428 aa16.3■□□□□ 0.2
PDLIM7-212ENST00000504380 IL1R1P14778 569 aa16.29■□□□□ 0.2
PDLIM7-212ENST00000504380 EIF6P56537 245 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-212ENST00000504380 GTF2IP78347 998 aa16.29■□□□□ 0.2
PDLIM7-212ENST00000504380 CHAF1AQ13111 956 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-212ENST00000504380 TDRD7Q8NHU6 1098 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-212ENST00000504380 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
PDLIM7-212ENST00000504380 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
PDLIM7-212ENST00000504380 PSMD14O00487 310 aa16.28■□□□□ 0.2
PDLIM7-212ENST00000504380 FRAT2O75474 233 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-212ENST00000504380 TOMM70O94826 608 aa16.28■□□□□ 0.2
PDLIM7-212ENST00000504380 DDNO94850 711 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-212ENST00000504380 SCARF1Q14162 830 aa16.28■□□□□ 0.2
PDLIM7-212ENST00000504380 PODNQ7Z5L7 613 aa16.28■□□□□ 0.2
PDLIM7-212ENST00000504380 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 NUCB1Q02818 461 aa16.27■□□□□ 0.2
PDLIM7-212ENST00000504380 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms