RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 EYA3Q99504 573 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 TLR7Q9NYK1 1049 aaKnown RBP16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 POLLQ9UGP5 575 aa16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 DBNLQ9UJU6 430 aaKnown RBP16.96■□□□□ 0.31
CYSTM1-202ENST00000504227 WTIPA6NIX2 430 aaPredicted RBP16.95■□□□□ 0.3
CYSTM1-202ENST00000504227 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
CYSTM1-202ENST00000504227 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
CYSTM1-202ENST00000504227 STAP2Q9UGK3 403 aa16.95■□□□□ 0.3
CYSTM1-202ENST00000504227 PDE1AP54750 535 aa16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 SKAP1Q86WV1 359 aa16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 PSMD1Q99460 953 aa16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 ZC3H12CQ9C0D7 883 aaKnown RBP16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 CACNA1SQ13698 1873 aa16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 TTC41PQ6P2S7 1318 aa16.94■□□□□ 0.3
CYSTM1-202ENST00000504227 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
CYSTM1-202ENST00000504227 ERC2O15083 957 aa16.93■□□□□ 0.3
CYSTM1-202ENST00000504227 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
CYSTM1-202ENST00000504227 FAM84BQ96KN1 310 aaPredicted RBP16.93■□□□□ 0.3
CYSTM1-202ENST00000504227 AOX1Q06278 1338 aa16.93■□□□□ 0.3
CYSTM1-202ENST00000504227 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
CYSTM1-202ENST00000504227 UQCRFS1P1P0C7P4 283 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 HIBADHP31937 336 aaKnown RBP16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 GYG1P46976 350 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 BCAMP50895 628 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 ZNF804AQ7Z570 1209 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 GPR101Q96P66 508 aaPredicted RBP16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
CYSTM1-202ENST00000504227 BRCA1P38398 1863 aaKnown RBP16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 G3V3G9 751 aa16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 ATP5JP18859 108 aa16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 KLRK1P26718 216 aa16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 PHKA1P46020 1223 aa16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 DCAF8Q5TAQ9 597 aa16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
CYSTM1-202ENST00000504227 MED23Q9ULK4 1368 aa16.9■□□□□ 0.3
CYSTM1-202ENST00000504227 TSHZ3Q63HK5 1081 aa16.9■□□□□ 0.3
CYSTM1-202ENST00000504227 TXNRD3Q86VQ6 643 aa16.9■□□□□ 0.3
CYSTM1-202ENST00000504227 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
CYSTM1-202ENST00000504227 TAOK3Q9H2K8 898 aa16.9■□□□□ 0.3
CYSTM1-202ENST00000504227 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
CYSTM1-202ENST00000504227 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
CYSTM1-202ENST00000504227 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
CYSTM1-202ENST00000504227 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
CYSTM1-202ENST00000504227 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.29
CYSTM1-202ENST00000504227 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
CYSTM1-202ENST00000504227 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
CYSTM1-202ENST00000504227 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
CYSTM1-202ENST00000504227 SEMA3EO15041 775 aa16.88■□□□□ 0.29
CYSTM1-202ENST00000504227 PPIP5K2O43314 1243 aa16.88■□□□□ 0.29
CYSTM1-202ENST00000504227 ARID4AP29374 1257 aaPredicted RBP16.88■□□□□ 0.29
CYSTM1-202ENST00000504227 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
CYSTM1-202ENST00000504227 PI4K2BQ8TCG2 481 aa16.88■□□□□ 0.29
CYSTM1-202ENST00000504227 LTBP3Q9NS15 1303 aa16.88■□□□□ 0.29
CYSTM1-202ENST00000504227 GPR162Q16538 588 aa16.87■□□□□ 0.29
CYSTM1-202ENST00000504227 AOC3Q16853 763 aa16.87■□□□□ 0.29
CYSTM1-202ENST00000504227 TTC22Q5TAA0 569 aa16.87■□□□□ 0.29
CYSTM1-202ENST00000504227 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
CYSTM1-202ENST00000504227 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
CYSTM1-202ENST00000504227 ZNF277Q9NRM2 450 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-202ENST00000504227 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
CYSTM1-202ENST00000504227 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 NFKBIEO00221 500 aa16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 HAUS7Q99871 368 aa16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 DENND2AQ9ULE3 1009 aa16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 IQSEC3Q9UPP2 1182 aaPredicted RBP16.86■□□□□ 0.29
CYSTM1-202ENST00000504227 ARAP2Q8WZ64 1704 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 ARFGEF1Q9Y6D6 1849 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 ZBTB22O15209 634 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 IL1R1P14778 569 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.293e-9■■□□□ 12.1
CYSTM1-202ENST00000504227 MCAMP43121 646 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 RASGRF1Q13972 1273 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 PODNQ7Z5L7 613 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 SPATA5Q8NB90 893 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 DNAJC2Q99543 621 aaKnown RBP16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
CYSTM1-202ENST00000504227 TRIM6-TRIM34B2RNG4 842 aa16.84■□□□□ 0.29
CYSTM1-202ENST00000504227 GRIN3BO60391 1043 aa16.84■□□□□ 0.29
CYSTM1-202ENST00000504227 SCARF1Q14162 830 aa16.84■□□□□ 0.29
CYSTM1-202ENST00000504227 BMP2KLQ5H9B9 411 aa16.84■□□□□ 0.29
CYSTM1-202ENST00000504227 ECE2O60344 883 aa16.83■□□□□ 0.28
CYSTM1-202ENST00000504227 MAP4K4O95819 1239 aaPredicted RBP16.83■□□□□ 0.28
CYSTM1-202ENST00000504227 ZAP70P43403 619 aa16.83■□□□□ 0.28
CYSTM1-202ENST00000504227 RASSF7Q02833 373 aa16.83■□□□□ 0.28
CYSTM1-202ENST00000504227 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.28
CYSTM1-202ENST00000504227 PDS5AQ29RF7 1337 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms