RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 NTSR2O95665 410 aa11.41□□□□□ -0.58
ARHGEF28-206ENST00000504003 NFIXQ14938 502 aa11.41□□□□□ -0.58
ARHGEF28-206ENST00000504003 CCDC152Q4G0S7 254 aa11.41□□□□□ -0.58
ARHGEF28-206ENST00000504003 TAF7LQ5H9L4 462 aa11.41□□□□□ -0.58
ARHGEF28-206ENST00000504003 ERC1Q8IUD2 1116 aa11.41□□□□□ -0.58
ARHGEF28-206ENST00000504003 NLRP3Q96P20 1036 aa11.41□□□□□ -0.58
ARHGEF28-206ENST00000504003 COL24A1Q17RW2 1714 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 SERPINB2P05120 415 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 TM4SF1P30408 202 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 CASP7P55210 303 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 CTSWP56202 376 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 IFIT5Q13325 482 aaKnown RBP11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 OS9Q13438 667 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 C6orf132Q5T0Z8 1188 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 LMBR1LQ6UX01 489 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 NYAP1Q6ZVC0 841 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 SMIM5Q71RC9 77 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 AMIGO3Q86WK7 504 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 SSH3Q8TE77 659 aa11.4□□□□□ -0.58
ARHGEF28-206ENST00000504003 LAMB2P55268 1798 aa11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 ANKRD18BA2A2Z9 1011 aa11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 POLD1P28340 1107 aa11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 G3BP1Q13283 466 aaKnown RBP eCLIP11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 JARID2Q92833 1246 aaPredicted RBP11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 PDZRN3Q9UPQ7 1066 aa11.39□□□□□ -0.59
ARHGEF28-206ENST00000504003 SURF6O75683 361 aaKnown RBP11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 MMP10P09238 476 aa11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 FOXO4P98177 505 aa11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 ERFEQ4G0M1 354 aa11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 NUTM1Q86Y26 1132 aa11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 CDC5LQ99459 802 aaKnown RBP11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 DCTPP1Q9H773 170 aa11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
ARHGEF28-206ENST00000504003 RIC1Q4ADV7 1423 aa11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 POLRMTO00411 1230 aaKnown RBP11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 IGHDP01880 384 aa11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 CSF1RP07333 972 aa11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 HCLS1P14317 486 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 PDE6BP35913 854 aa11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 TTLL11Q8NHH1 800 aa11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 RPGRQ92834 1020 aaKnown RBP11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 ZFRQ96KR1 1074 aaKnown RBP11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 MTFR1LQ9H019 292 aa11.37□□□□□ -0.59
ARHGEF28-206ENST00000504003 PNMA6EA0A0J9YXQ4 647 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 TRIM6-TRIM34B2RNG4 842 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 IGHMBP2P38935 993 aaKnown RBP11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 SF3B3Q15393 1217 aaKnown RBP11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 PRR5LQ6MZQ0 368 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 SIRT2Q8IXJ6 389 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 SMC5Q8IY18 1101 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 KIF1BPQ96EK5 621 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 KAZALD1Q96I82 304 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 MPHOSPH8Q99549 860 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 BRIP1Q9BX63 1249 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 LRRCC1Q9C099 1032 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 TMX4Q9H1E5 349 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 COPRSQ9NQ92 184 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 RTL9Q8NET4 1388 aa11.36□□□□□ -0.59
ARHGEF28-206ENST00000504003 KDM2BQ8NHM5 1336 aa11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 DDX60Q8IY21 1712 aaKnown RBP11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 ITGA6P23229 1130 aa11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 BCAMP50895 628 aa11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 R3HDM1Q15032 1099 aaKnown RBP11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 ANKRD45Q5TZF3 282 aa11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 DDX12PQ92771 950 aa11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 RBM17Q96I25 401 aaKnown RBP11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
ARHGEF28-206ENST00000504003 CIAO1O76071 339 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 IL15P40933 162 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 DDR1Q08345 913 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 FAM161AQ3B820 660 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 LDHAL6AQ6ZMR3 332 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 SYNE4Q8N205 404 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 GREM2Q9H772 168 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 CNNM1Q9NRU3 951 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 EXOC6BQ9Y2D4 811 aa11.34□□□□□ -0.59
ARHGEF28-206ENST00000504003 H0YIN7 160 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 EYA2O00167 538 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 ITGBL1O95965 494 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 ALDH1B1P30837 517 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 NUCB1Q02818 461 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 NBR1Q14596 966 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 TMC4Q7Z404 712 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 CHD1LQ86WJ1 897 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 CLASRPQ8N2M8 674 aaKnown RBP11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 GPATCH3Q96I76 525 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 SIL1Q9H173 461 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 AKAP2Q9Y2D5 859 aa11.33□□□□□ -0.6
ARHGEF28-206ENST00000504003 MROH5Q6ZUA9 1318 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms