RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 GLTPD2A6NH11 291 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 IFIT1P09914 478 aaKnown RBP13.77□□□□□ -0.21
VCAN-205ENST00000503923 SLC5A1P13866 664 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 FGFR2P21802 821 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 PODNQ7Z5L7 613 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 TXNRD3Q86VQ6 643 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 EXOC6Q8TAG9 804 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 LPIN2Q92539 896 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 ZNF541Q9H0D2 1346 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 AKAP2Q9Y2D5 859 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
VCAN-205ENST00000503923 YDJCA8MPS7 323 aa13.76□□□□□ -0.21
VCAN-205ENST00000503923 SASH1O94885 1247 aa13.76□□□□□ -0.21
VCAN-205ENST00000503923 TFCP2Q12800 502 aa13.76□□□□□ -0.21
VCAN-205ENST00000503923 ATP2B3Q16720 1220 aa13.76□□□□□ -0.21
VCAN-205ENST00000503923 ZNF804AQ7Z570 1209 aa13.76□□□□□ -0.21
VCAN-205ENST00000503923 ERC1Q8IUD2 1116 aa13.76□□□□□ -0.21
VCAN-205ENST00000503923 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
VCAN-205ENST00000503923 HIBADHP31937 336 aaKnown RBP13.75□□□□□ -0.21
VCAN-205ENST00000503923 CXCL9Q07325 125 aa13.75□□□□□ -0.21
VCAN-205ENST00000503923 TNIP1Q15025 636 aa13.75□□□□□ -0.21
VCAN-205ENST00000503923 CAVIN4Q5BKX8 364 aa13.75□□□□□ -0.21
VCAN-205ENST00000503923 CIAPIN1Q6FI81 312 aa13.75□□□□□ -0.21
VCAN-205ENST00000503923 GPC2Q8N158 579 aa13.75□□□□□ -0.21
VCAN-205ENST00000503923 CD209Q9NNX6 404 aa13.75□□□□□ -0.21
VCAN-205ENST00000503923 EXOC6BQ9Y2D4 811 aa13.75□□□□□ -0.21
VCAN-205ENST00000503923 RAB11FIP3O75154 756 aa13.74□□□□□ -0.21
VCAN-205ENST00000503923 RAD17O75943 681 aa13.74□□□□□ -0.21
VCAN-205ENST00000503923 DDNO94850 711 aaPredicted RBP13.74□□□□□ -0.21
VCAN-205ENST00000503923 GYG1P46976 350 aa13.74□□□□□ -0.21
VCAN-205ENST00000503923 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
VCAN-205ENST00000503923 VPS37DQ86XT2 251 aa13.74□□□□□ -0.21
VCAN-205ENST00000503923 ZNF526Q8TF50 670 aaPredicted RBP13.74□□□□□ -0.21
VCAN-205ENST00000503923 FAM84BQ96KN1 310 aaPredicted RBP13.74□□□□□ -0.21
VCAN-205ENST00000503923 GPR108Q9NPR9 543 aa13.74□□□□□ -0.21
VCAN-205ENST00000503923 GJA3Q9Y6H8 435 aa13.74□□□□□ -0.21
VCAN-205ENST00000503923 SCN9AQ15858 1988 aa13.73□□□□□ -0.21
VCAN-205ENST00000503923 A0A1B0GUL7 405 aa13.73□□□□□ -0.21
VCAN-205ENST00000503923 IL1R1P14778 569 aa13.73□□□□□ -0.21
VCAN-205ENST00000503923 FBXO33Q7Z6M2 555 aa13.73□□□□□ -0.21
VCAN-205ENST00000503923 ZNF784Q8NCA9 323 aaPredicted RBP13.73□□□□□ -0.21
VCAN-205ENST00000503923 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
VCAN-205ENST00000503923 ARAP2Q8WZ64 1704 aa13.73□□□□□ -0.21
VCAN-205ENST00000503923 ZNF609O15014 1411 aa13.73□□□□□ -0.21
VCAN-205ENST00000503923 PSME4Q14997 1843 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 PSMD14O00487 310 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 BCAMP50895 628 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 TIMM10P62072 90 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 TNNI3KQ59H18 835 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 TDRD7Q8NHU6 1098 aaKnown RBP13.72□□□□□ -0.21
VCAN-205ENST00000503923 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 KIF1BPQ96EK5 621 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 L3MBTL3Q96JM7 780 aaPredicted RBP13.72□□□□□ -0.21
VCAN-205ENST00000503923 NEUROD6Q96NK8 337 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 KCNQ5Q9NR82 932 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.72□□□□□ -0.21
VCAN-205ENST00000503923 FPGT-TNNI3KV9GXZ4 949 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 WDR90Q96KV7 1748 aa13.72□□□□□ -0.21
VCAN-205ENST00000503923 VIL1P09327 827 aaKnown RBP13.71□□□□□ -0.21
VCAN-205ENST00000503923 HDAC1Q13547 482 aaPredicted RBP13.71□□□□□ -0.21
VCAN-205ENST00000503923 STRIP1Q5VSL9 837 aa13.71□□□□□ -0.21
VCAN-205ENST00000503923 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
VCAN-205ENST00000503923 FBXW7Q969H0 707 aa13.71□□□□□ -0.21
VCAN-205ENST00000503923 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
VCAN-205ENST00000503923 DCTPP1Q9H773 170 aa13.71□□□□□ -0.21
VCAN-205ENST00000503923 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
VCAN-205ENST00000503923 APBB1O00213 710 aa13.7□□□□□ -0.22
VCAN-205ENST00000503923 FRAT2O75474 233 aaPredicted RBP13.7□□□□□ -0.22
VCAN-205ENST00000503923 RPS12P25398 132 aaKnown RBP13.7□□□□□ -0.22
VCAN-205ENST00000503923 LMOD1P29536 600 aaPredicted RBP13.7□□□□□ -0.22
VCAN-205ENST00000503923 ADORA1P30542 326 aa13.7□□□□□ -0.22
VCAN-205ENST00000503923 GTF2IP78347 998 aa13.7□□□□□ -0.22
VCAN-205ENST00000503923 RSBN1LQ6PCB5 846 aaPredicted RBP13.7□□□□□ -0.22
VCAN-205ENST00000503923 GNL3LQ9NVN8 582 aaKnown RBP13.7□□□□□ -0.22
VCAN-205ENST00000503923 SCN4AP35499 1836 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 MYO3BQ8WXR4 1341 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 VEGFAP15692 232 aaPredicted RBP13.69□□□□□ -0.22
VCAN-205ENST00000503923 GMPSP49915 693 aaPredicted RBP13.69□□□□□ -0.22
VCAN-205ENST00000503923 DACT2Q5SW24 774 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 GORABQ5T7V8 394 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 CCDC102BQ68D86 513 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 CLASRPQ8N2M8 674 aaKnown RBP13.69□□□□□ -0.22
VCAN-205ENST00000503923 AGBL3Q8NEM8 1001 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 DPF2Q92785 391 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 LRRCC1Q9C099 1032 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 RWDD1Q9H446 243 aaPredicted RBP13.69□□□□□ -0.22
VCAN-205ENST00000503923 RRAGCQ9HB90 399 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 IL1RAPL2Q9NP60 686 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 NMRK2Q9NPI5 230 aa13.69□□□□□ -0.22
VCAN-205ENST00000503923 ZBTB12Q9Y330 459 aaPredicted RBP13.69□□□□□ -0.22
VCAN-205ENST00000503923 FAM205AQ6ZU69 1335 aa13.68□□□□□ -0.22
VCAN-205ENST00000503923 POTECB2RU33 542 aa13.68□□□□□ -0.22
VCAN-205ENST00000503923 SEMA3EO15041 775 aa13.68□□□□□ -0.22
VCAN-205ENST00000503923 ZBTB22O15209 634 aa13.68□□□□□ -0.22
VCAN-205ENST00000503923 PHKA1P46020 1223 aa13.68□□□□□ -0.22
VCAN-205ENST00000503923 SCNN1DP51172 638 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms