RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 GLTPD2A6NH11 291 aa20.45■□□□□ 0.86
SCLT1-205ENST00000503401 RAD17O75943 681 aa20.45■□□□□ 0.86
SCLT1-205ENST00000503401 EIF6P56537 245 aaKnown RBP20.45■□□□□ 0.86
SCLT1-205ENST00000503401 TFCP2Q12800 502 aa20.45■□□□□ 0.86
SCLT1-205ENST00000503401 EXOC6Q8TAG9 804 aa20.45■□□□□ 0.86
SCLT1-205ENST00000503401 GJA3Q9Y6H8 435 aa20.45■□□□□ 0.86
SCLT1-205ENST00000503401 CXCL9Q07325 125 aa20.44■□□□□ 0.86
SCLT1-205ENST00000503401 OS9Q13438 667 aaPredicted RBP20.44■□□□□ 0.86
SCLT1-205ENST00000503401 PUM3Q15397 648 aaKnown RBP20.44■□□□□ 0.86
SCLT1-205ENST00000503401 EXOC6BQ9Y2D4 811 aa20.44■□□□□ 0.86
SCLT1-205ENST00000503401 PCDHB15Q9Y5E8 787 aa20.44■□□□□ 0.86
SCLT1-205ENST00000503401 GYG1P46976 350 aa20.43■□□□□ 0.86
SCLT1-205ENST00000503401 DPY19L2Q6NUT2 758 aa20.43■□□□□ 0.86
SCLT1-205ENST00000503401 SASH1O94885 1247 aa20.42■□□□□ 0.86
SCLT1-205ENST00000503401 FGFR2P21802 821 aa20.42■□□□□ 0.86
SCLT1-205ENST00000503401 NOP58Q9Y2X3 529 aaKnown RBP20.42■□□□□ 0.86
SCLT1-205ENST00000503401 HMMRO75330 724 aa20.42■□□□□ 0.86
SCLT1-205ENST00000503401 ATP2B3Q16720 1220 aa20.42■□□□□ 0.86
SCLT1-205ENST00000503401 C15orf52Q6ZUT6 534 aaKnown RBP20.42■□□□□ 0.86
SCLT1-205ENST00000503401 KDM2BQ8NHM5 1336 aa20.41■□□□□ 0.86
SCLT1-205ENST00000503401 COA1Q9GZY4 146 aa20.41■□□□□ 0.86
SCLT1-205ENST00000503401 GPBP1L1Q9HC44 474 aaPredicted RBP20.41■□□□□ 0.86
SCLT1-205ENST00000503401 CD209Q9NNX6 404 aa20.41■□□□□ 0.86
SCLT1-205ENST00000503401 NMRK2Q9NPI5 230 aa20.41■□□□□ 0.86
SCLT1-205ENST00000503401 PSME4Q14997 1843 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 APBB1O00213 710 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 PSMD14O00487 310 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 SLC5A1P13866 664 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 TIMM10P62072 90 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 CIAPIN1Q6FI81 312 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 GPC2Q8N158 579 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 LPIN2Q92539 896 aa20.4■□□□□ 0.86
SCLT1-205ENST00000503401 FAM84BQ96KN1 310 aaPredicted RBP20.4■□□□□ 0.86
SCLT1-205ENST00000503401 IFIT1P09914 478 aaKnown RBP20.39■□□□□ 0.86
SCLT1-205ENST00000503401 ZNF804AQ7Z570 1209 aa20.39■□□□□ 0.86
SCLT1-205ENST00000503401 PODNQ7Z5L7 613 aa20.39■□□□□ 0.86
SCLT1-205ENST00000503401 FBXW7Q969H0 707 aa20.39■□□□□ 0.86
SCLT1-205ENST00000503401 ADORA1P30542 326 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 HIBADHP31937 336 aaKnown RBP20.38■□□□□ 0.85
SCLT1-205ENST00000503401 BCAMP50895 628 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 RRAGCQ9HB90 399 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 IQSEC3Q9UPP2 1182 aaPredicted RBP20.38■□□□□ 0.85
SCLT1-205ENST00000503401 ZBTB12Q9Y330 459 aaPredicted RBP20.38■□□□□ 0.85
SCLT1-205ENST00000503401 ZNF646O15015 1829 aaPredicted RBP20.38■□□□□ 0.85
SCLT1-205ENST00000503401 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 WDR90Q96KV7 1748 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 A0A1B0GUL7 405 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 VPS37DQ86XT2 251 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 JAG2Q9Y219 1238 aa20.38■□□□□ 0.85
SCLT1-205ENST00000503401 TNIP1Q15025 636 aa20.37■□□□□ 0.85
SCLT1-205ENST00000503401 CAVIN4Q5BKX8 364 aa20.37■□□□□ 0.85
SCLT1-205ENST00000503401 FBXO33Q7Z6M2 555 aa20.37■□□□□ 0.85
SCLT1-205ENST00000503401 NEUROD6Q96NK8 337 aa20.37■□□□□ 0.85
SCLT1-205ENST00000503401 MXD3Q9BW11 206 aa20.37■□□□□ 0.85
SCLT1-205ENST00000503401 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
SCLT1-205ENST00000503401 ZNF609O15014 1411 aa20.37■□□□□ 0.85
SCLT1-205ENST00000503401 POTECB2RU33 542 aa20.36■□□□□ 0.85
SCLT1-205ENST00000503401 IL1R1P14778 569 aa20.36■□□□□ 0.85
SCLT1-205ENST00000503401 GMPSP49915 693 aaPredicted RBP20.36■□□□□ 0.85
SCLT1-205ENST00000503401 AKAP2Q9Y2D5 859 aa20.36■□□□□ 0.85
SCLT1-205ENST00000503401 MYH13Q9UKX3 1938 aa20.36■□□□□ 0.85
SCLT1-205ENST00000503401 USP17L3A6NCW0 530 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 USP17L4A6NCW7 530 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 GTF2IP78347 998 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 USP17L1Q7RTZ2 530 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 XAGE2Q96GT9 111 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 CENPBP07199 599 aaPredicted RBP20.35■□□□□ 0.85
SCLT1-205ENST00000503401 VIL1P09327 827 aaKnown RBP20.35■□□□□ 0.85
SCLT1-205ENST00000503401 SCNN1DP51172 638 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 TNNI3KQ59H18 835 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 TTLL5Q6EMB2 1281 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 L3MBTL3Q96JM7 780 aaPredicted RBP20.35■□□□□ 0.85
SCLT1-205ENST00000503401 IL1RAPL2Q9NP60 686 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 FPGT-TNNI3KV9GXZ4 949 aa20.35■□□□□ 0.85
SCLT1-205ENST00000503401 SCN4AP35499 1836 aa20.34■□□□□ 0.85
SCLT1-205ENST00000503401 SHTN1A0MZ66 631 aa20.34■□□□□ 0.85
SCLT1-205ENST00000503401 PHKA1P46020 1223 aa20.34■□□□□ 0.85
SCLT1-205ENST00000503401 HSP90AB4PQ58FF6 505 aa20.34■□□□□ 0.85
SCLT1-205ENST00000503401 ERC1Q8IUD2 1116 aa20.34■□□□□ 0.85
SCLT1-205ENST00000503401 TDRD7Q8NHU6 1098 aaKnown RBP20.34■□□□□ 0.85
SCLT1-205ENST00000503401 RHPN1Q8TCX5 695 aa20.34■□□□□ 0.85
SCLT1-205ENST00000503401 DACT2Q5SW24 774 aa20.33■□□□□ 0.84
SCLT1-205ENST00000503401 FRAT2O75474 233 aaPredicted RBP20.32■□□□□ 0.84
SCLT1-205ENST00000503401 VEGFAP15692 232 aaPredicted RBP20.32■□□□□ 0.84
SCLT1-205ENST00000503401 EPS15P42566 896 aa20.32■□□□□ 0.84
SCLT1-205ENST00000503401 STRIP1Q5VSL9 837 aa20.32■□□□□ 0.84
SCLT1-205ENST00000503401 RSBN1LQ6PCB5 846 aaPredicted RBP20.32■□□□□ 0.84
SCLT1-205ENST00000503401 EAF2Q96CJ1 260 aaPredicted RBP20.32■□□□□ 0.84
SCLT1-205ENST00000503401 KIF3CO14782 793 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 CHAF1AQ13111 956 aaPredicted RBP20.31■□□□□ 0.84
SCLT1-205ENST00000503401 AAMPQ13685 434 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 CCDC102BQ68D86 513 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 KIF1BPQ96EK5 621 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 DBNDD2Q9BQY9 259 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 CCDC8Q9H0W5 538 aaPredicted RBP20.31■□□□□ 0.84
SCLT1-205ENST00000503401 DCTPP1Q9H773 170 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 GPR108Q9NPR9 543 aa20.31■□□□□ 0.84
SCLT1-205ENST00000503401 TLR7Q9NYK1 1049 aaKnown RBP20.31■□□□□ 0.84
SCLT1-205ENST00000503401 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
SCLT1-205ENST00000503401 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms