RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 TIMM10P62072 90 aa10.99□□□□□ -0.65
NR1I3-216ENST00000502848 CHRNDQ07001 517 aa10.99□□□□□ -0.65
NR1I3-216ENST00000502848 TTC39AQ5SRH9 613 aa10.99□□□□□ -0.65
NR1I3-216ENST00000502848 C15orf52Q6ZUT6 534 aaKnown RBP10.99□□□□□ -0.65
NR1I3-216ENST00000502848 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
NR1I3-216ENST00000502848 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
NR1I3-216ENST00000502848 MINPP1Q9UNW1 487 aa10.99□□□□□ -0.65
NR1I3-216ENST00000502848 DUOX1Q9NRD9 1551 aa10.99□□□□□ -0.65
NR1I3-216ENST00000502848 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 AK9Q5TCS8 1911 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 MCCP23508 829 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 ANAPC15P60006 121 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 BOLA2Q9H3K6 86 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 PAG1Q9NWQ8 432 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 LEMD3Q9Y2U8 911 aa10.98□□□□□ -0.65
NR1I3-216ENST00000502848 MMP10P09238 476 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 NPR1P16066 1061 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 ALDH1B1P30837 517 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 CCDC102BQ68D86 513 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
NR1I3-216ENST00000502848 CELF1Q92879 486 aaKnown RBP10.97□□□□□ -0.65
NR1I3-216ENST00000502848 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 USP26Q9BXU7 913 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 GNL3LQ9NVN8 582 aaKnown RBP10.97□□□□□ -0.65
NR1I3-216ENST00000502848 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 XDHP47989 1333 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 MED23Q9ULK4 1368 aa10.97□□□□□ -0.65
NR1I3-216ENST00000502848 SRGNP10124 158 aa10.96□□□□□ -0.65
NR1I3-216ENST00000502848 CAVIN4Q5BKX8 364 aa10.96□□□□□ -0.65
NR1I3-216ENST00000502848 IPO9Q96P70 1041 aaKnown RBP10.96□□□□□ -0.65
NR1I3-216ENST00000502848 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.96□□□□□ -0.65
NR1I3-216ENST00000502848 HELLSQ9NRZ9 838 aa10.96□□□□□ -0.65
NR1I3-216ENST00000502848 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 ADORA1P30542 326 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 STYK1Q6J9G0 422 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 KIAA1211Q6ZU35 1233 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 MASTLQ96GX5 879 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 BCL11AQ9H165 835 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 ANKRD31Q8N7Z5 1873 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 COL4A1P02462 1669 aa10.95□□□□□ -0.66
NR1I3-216ENST00000502848 ATP2B4P23634 1241 aa10.94□□□□□ -0.66
NR1I3-216ENST00000502848 BECN1Q14457 450 aa10.94□□□□□ -0.66
NR1I3-216ENST00000502848 SP8Q8IXZ3 490 aa10.94□□□□□ -0.66
NR1I3-216ENST00000502848 DNAJC2Q99543 621 aaKnown RBP10.94□□□□□ -0.66
NR1I3-216ENST00000502848 DENND2AQ9ULE3 1009 aa10.94□□□□□ -0.66
NR1I3-216ENST00000502848 LTBP1Q14766 1721 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 IRS2Q9Y4H2 1338 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 GOLIM4O00461 696 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 RNF113AO15541 343 aaKnown RBP10.93□□□□□ -0.66
NR1I3-216ENST00000502848 MCAMP43121 646 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 PHKA1P46020 1223 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 KCNJ4P48050 445 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 RABEP1Q15276 862 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 UBE3CQ15386 1083 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 MCMDC2Q4G0Z9 681 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 ZMYM1Q5SVZ6 1142 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 CC2D2BQ6DHV5 1058 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 FBXO33Q7Z6M2 555 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 DEFB132Q7Z7B7 95 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 SPATA5Q8NB90 893 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
NR1I3-216ENST00000502848 KCNB2Q92953 911 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 SNX21Q969T3 373 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 ANO2Q9NQ90 1003 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 ATP6V0A2Q9Y487 856 aa10.93□□□□□ -0.66
NR1I3-216ENST00000502848 CCDC171Q6TFL3 1326 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 SALL1Q9NSC2 1324 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 TAF5LO75529 589 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 MAP4K4O95819 1239 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-216ENST00000502848 HSPA4P34932 840 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 ZAP70P43403 619 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 NMIQ13287 307 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-216ENST00000502848 MKRN4PQ13434 485 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-216ENST00000502848 RASGRF1Q13972 1273 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 CWC27Q6UX04 472 aaKnown RBP10.92□□□□□ -0.66
NR1I3-216ENST00000502848 APPBP2Q92624 585 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 LSG1Q9H089 658 aaKnown RBP10.92□□□□□ -0.66
NR1I3-216ENST00000502848 TMX4Q9H1E5 349 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-216ENST00000502848 HMG20BQ9P0W2 317 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 DOCK2Q92608 1830 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 COL11A2P13942 1736 aaPredicted RBP10.92□□□□□ -0.66
NR1I3-216ENST00000502848 AKAP11Q9UKA4 1901 aa10.92□□□□□ -0.66
NR1I3-216ENST00000502848 DLEC1Q9Y238 1755 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 H0YIN7 160 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 PPEF1O14829 653 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-216ENST00000502848 HIBADHP31937 336 aaKnown RBP10.91□□□□□ -0.66
NR1I3-216ENST00000502848 FKBP4Q02790 459 aaKnown RBP eCLIP10.91□□□□□ -0.66
NR1I3-216ENST00000502848 MAP3K12Q12852 859 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 SCARF1Q14162 830 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 RNF20Q5VTR2 975 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 ZNF804AQ7Z570 1209 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 ZGPATQ8N5A5 531 aaKnown RBP10.91□□□□□ -0.66
NR1I3-216ENST00000502848 MAP4K1Q92918 833 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 CNKSR1Q969H4 720 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 FAM84BQ96KN1 310 aaPredicted RBP10.91□□□□□ -0.66
NR1I3-216ENST00000502848 DSCC1Q9BVC3 393 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
NR1I3-216ENST00000502848 GGA1Q9UJY5 639 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms