RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 LDLRAD1Q5T700 205 aa16.44■□□□□ 0.22
LMNA-218ENST00000502357 C8orf58Q8NAV2 365 aa16.44■□□□□ 0.22
LMNA-218ENST00000502357 TTLL11Q8NHH1 800 aa16.44■□□□□ 0.22
LMNA-218ENST00000502357 SPEF2Q9C093 1822 aa16.44■□□□□ 0.22
LMNA-218ENST00000502357 MYBBP1AQ9BQG0 1328 aaKnown RBP16.44■□□□□ 0.22
LMNA-218ENST00000502357 MYH3P11055 1940 aa16.43■□□□□ 0.22
LMNA-218ENST00000502357 PTPN12Q05209 780 aaKnown RBP16.43■□□□□ 0.22
LMNA-218ENST00000502357 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
LMNA-218ENST00000502357 ANKRD18AQ8IVF6 992 aa16.43■□□□□ 0.22
LMNA-218ENST00000502357 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
LMNA-218ENST00000502357 CWC25Q9NXE8 425 aaPredicted RBP16.43■□□□□ 0.22
LMNA-218ENST00000502357 STRIP1Q5VSL9 837 aa16.42■□□□□ 0.22
LMNA-218ENST00000502357 FBXO46Q6PJ61 603 aaPredicted RBP16.42■□□□□ 0.22
LMNA-218ENST00000502357 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
LMNA-218ENST00000502357 G3V3G9 751 aa16.41■□□□□ 0.22
LMNA-218ENST00000502357 ELL2O00472 640 aaPredicted RBP16.41■□□□□ 0.22
LMNA-218ENST00000502357 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
LMNA-218ENST00000502357 KLRK1P26718 216 aa16.41■□□□□ 0.22
LMNA-218ENST00000502357 CCT4P50991 539 aaKnown RBP16.41■□□□□ 0.22
LMNA-218ENST00000502357 CTSWP56202 376 aa16.41■□□□□ 0.22
LMNA-218ENST00000502357 DCAF8Q5TAQ9 597 aa16.41■□□□□ 0.22
LMNA-218ENST00000502357 GREM2Q9H772 168 aa16.41■□□□□ 0.22
LMNA-218ENST00000502357 IFT57Q9NWB7 429 aa16.41■□□□□ 0.22
LMNA-218ENST00000502357 SSC5DA1L4H1 1573 aa16.4■□□□□ 0.22
LMNA-218ENST00000502357 COA1Q9GZY4 146 aa16.4■□□□□ 0.22
LMNA-218ENST00000502357 MAP3K11Q16584 847 aa16.39■□□□□ 0.21
LMNA-218ENST00000502357 SPRYD7Q5W111 196 aa16.39■□□□□ 0.21
LMNA-218ENST00000502357 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
LMNA-218ENST00000502357 HDAC9Q9UKV0 1011 aa16.39■□□□□ 0.21
LMNA-218ENST00000502357 FZD1Q9UP38 647 aa16.39■□□□□ 0.21
LMNA-218ENST00000502357 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
LMNA-218ENST00000502357 H7C1W4 665 aa16.38■□□□□ 0.21
LMNA-218ENST00000502357 SASH1O94885 1247 aa16.38■□□□□ 0.21
LMNA-218ENST00000502357 CASP7P55210 303 aa16.38■□□□□ 0.21
LMNA-218ENST00000502357 CAP1Q01518 475 aa16.38■□□□□ 0.21
LMNA-218ENST00000502357 MKRN3Q13064 507 aaKnown RBP16.38■□□□□ 0.21
LMNA-218ENST00000502357 MYO3BQ8WXR4 1341 aa16.38■□□□□ 0.21
LMNA-218ENST00000502357 CENPFP49454 3210 aa16.38■□□□□ 0.21
LMNA-218ENST00000502357 FKTNO75072 461 aa16.37■□□□□ 0.21
LMNA-218ENST00000502357 MMP14P50281 582 aa16.37■□□□□ 0.21
LMNA-218ENST00000502357 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
LMNA-218ENST00000502357 CERS5Q8N5B7 392 aa16.37■□□□□ 0.21
LMNA-218ENST00000502357 CDC5LQ99459 802 aaKnown RBP16.37■□□□□ 0.21
LMNA-218ENST00000502357 PCDHAC2Q9Y5I4 1007 aa16.37■□□□□ 0.21
LMNA-218ENST00000502357 BRCA2P51587 3418 aa16.37■□□□□ 0.21
LMNA-218ENST00000502357 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
LMNA-218ENST00000502357 PI4KAP2A4QPH2 592 aa16.36■□□□□ 0.21
LMNA-218ENST00000502357 APAF1O14727 1248 aa16.36■□□□□ 0.21
LMNA-218ENST00000502357 GNAI1P63096 354 aa16.36■□□□□ 0.21
LMNA-218ENST00000502357 CWF19L2Q2TBE0 894 aaKnown RBP16.36■□□□□ 0.21
LMNA-218ENST00000502357 PI4KAP1Q8N8J0 262 aa16.36■□□□□ 0.21
LMNA-218ENST00000502357 LEMD3Q9Y2U8 911 aa16.36■□□□□ 0.21
LMNA-218ENST00000502357 AOX1Q06278 1338 aa16.36■□□□□ 0.21
LMNA-218ENST00000502357 NEURL1BA8MQ27 555 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 IGF2BP3O00425 579 aaKnown RBP eCLIP16.35■□□□□ 0.21
LMNA-218ENST00000502357 CSF1RP07333 972 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 SREBF2Q12772 1141 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 PRKG1Q13976 671 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 TTLL5Q6EMB2 1281 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 PLA2G12BQ9BX93 195 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 A0A1B0GUL6 1792 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 ECM29Q5VYK3 1845 aa16.35■□□□□ 0.21
LMNA-218ENST00000502357 POTEFA5A3E0 1075 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 GJA5P36382 358 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 TTLL12Q14166 644 aaPredicted RBP16.34■□□□□ 0.21
LMNA-218ENST00000502357 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
LMNA-218ENST00000502357 G2E3Q7L622 706 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 OTOP1Q7RTM1 612 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 ARMC9Q7Z3E5 817 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 IFNL1Q8IU54 200 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 KIAA0825Q8IV33 1275 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 MTMR14Q8NCE2 650 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
LMNA-218ENST00000502357 COL1A1P02452 1464 aaPredicted RBP16.34■□□□□ 0.21
LMNA-218ENST00000502357 KIAA0100Q14667 2235 aaKnown RBP16.33■□□□□ 0.2
LMNA-218ENST00000502357 SNAP23O00161 211 aa16.33■□□□□ 0.2
LMNA-218ENST00000502357 DDX58O95786 925 aaKnown RBP16.33■□□□□ 0.2
LMNA-218ENST00000502357 GTF2IP78347 998 aa16.33■□□□□ 0.2
LMNA-218ENST00000502357 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
LMNA-218ENST00000502357 CCDC30Q5VVM6 783 aa16.33■□□□□ 0.2
LMNA-218ENST00000502357 APOBEC3FQ8IUX4 373 aaKnown RBP16.33■□□□□ 0.2
LMNA-218ENST00000502357 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
LMNA-218ENST00000502357 CD209Q9NNX6 404 aa16.33■□□□□ 0.2
LMNA-218ENST00000502357 ANGEL1Q9UNK9 670 aaKnown RBP16.33■□□□□ 0.2
LMNA-218ENST00000502357 NF2P35240 595 aa16.32■□□□□ 0.2
LMNA-218ENST00000502357 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
LMNA-218ENST00000502357 DEFB129Q9H1M3 183 aa16.32■□□□□ 0.2
LMNA-218ENST00000502357 ALDH1A1P00352 501 aa16.31■□□□□ 0.2
LMNA-218ENST00000502357 ZBTB48P10074 688 aaPredicted RBP16.31■□□□□ 0.2
LMNA-218ENST00000502357 ITGA6P23229 1130 aa16.31■□□□□ 0.2
LMNA-218ENST00000502357 INHBEP58166 350 aa16.31■□□□□ 0.2
LMNA-218ENST00000502357 GCKRQ14397 625 aa16.31■□□□□ 0.2
LMNA-218ENST00000502357 UBE3BQ7Z3V4 1068 aa16.31■□□□□ 0.2
LMNA-218ENST00000502357 WNK4Q96J92 1243 aa16.31■□□□□ 0.2
LMNA-218ENST00000502357 PTPN18Q99952 460 aa16.31■□□□□ 0.2
LMNA-218ENST00000502357 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
LMNA-218ENST00000502357 MANSC4A6NHS7 340 aaPredicted RBP16.3■□□□□ 0.2
LMNA-218ENST00000502357 CHRNDQ07001 517 aa16.3■□□□□ 0.2
LMNA-218ENST00000502357 HABP4Q5JVS0 413 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms