RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 LMOD1P29536 600 aaPredicted RBP20.02■□□□□ 0.8
LMNA-217ENST00000498722 KLRK1P26718 216 aa20.02■□□□□ 0.79
LMNA-217ENST00000498722 RFX5P48382 616 aaPredicted RBP20.02■□□□□ 0.79
LMNA-217ENST00000498722 PTPN12Q05209 780 aaKnown RBP20.02■□□□□ 0.79
LMNA-217ENST00000498722 FBXW7Q969H0 707 aa20.02■□□□□ 0.79
LMNA-217ENST00000498722 L3MBTL3Q96JM7 780 aaPredicted RBP20.02■□□□□ 0.79
LMNA-217ENST00000498722 RIPOR2Q9Y4F9 1068 aa20.02■□□□□ 0.79
LMNA-217ENST00000498722 EYA2O00167 538 aa20.01■□□□□ 0.79
LMNA-217ENST00000498722 ZBTB7BO15156 539 aaPredicted RBP20.01■□□□□ 0.79
LMNA-217ENST00000498722 C1QTNF8P60827 252 aa20.01■□□□□ 0.79
LMNA-217ENST00000498722 TXNRD3Q86VQ6 643 aa20.01■□□□□ 0.79
LMNA-217ENST00000498722 RWDD1Q9H446 243 aaPredicted RBP20.01■□□□□ 0.79
LMNA-217ENST00000498722 HACL1Q9UJ83 578 aa20.01■□□□□ 0.79
LMNA-217ENST00000498722 PA2G4Q9UQ80 394 aaKnown RBP20.01■□□□□ 0.79
LMNA-217ENST00000498722 POTECB2RU33 542 aa20■□□□□ 0.79
LMNA-217ENST00000498722 PSMD14O00487 310 aa20■□□□□ 0.79
LMNA-217ENST00000498722 KCNQ5Q9NR82 932 aa20■□□□□ 0.79
LMNA-217ENST00000498722 ZNF646O15015 1829 aaPredicted RBP19.99■□□□□ 0.79
LMNA-217ENST00000498722 TOMM70O94826 608 aa19.99■□□□□ 0.79
LMNA-217ENST00000498722 GMPSP49915 693 aaPredicted RBP19.99■□□□□ 0.79
LMNA-217ENST00000498722 COA1Q9GZY4 146 aa19.99■□□□□ 0.79
LMNA-217ENST00000498722 ZBTB40Q9NUA8 1239 aa19.99■□□□□ 0.79
LMNA-217ENST00000498722 MTX1Q13505 466 aa19.98■□□□□ 0.79
LMNA-217ENST00000498722 UBE4AQ14139 1066 aa19.98■□□□□ 0.79
LMNA-217ENST00000498722 EAPPQ56P03 285 aaPredicted RBP19.98■□□□□ 0.79
LMNA-217ENST00000498722 ZNF804AQ7Z570 1209 aa19.98■□□□□ 0.79
LMNA-217ENST00000498722 PODNQ7Z5L7 613 aa19.98■□□□□ 0.79
LMNA-217ENST00000498722 PNMA6EA0A0J9YXQ4 647 aa19.97■□□□□ 0.79
LMNA-217ENST00000498722 CIAO1O76071 339 aa19.97■□□□□ 0.79
LMNA-217ENST00000498722 PDE8BO95263 885 aa19.97■□□□□ 0.79
LMNA-217ENST00000498722 EPHX2P34913 555 aa19.97■□□□□ 0.79
LMNA-217ENST00000498722 SCNN1DP51172 638 aa19.97■□□□□ 0.79
LMNA-217ENST00000498722 TAF1DQ9H5J8 278 aaPredicted RBP19.97■□□□□ 0.79
LMNA-217ENST00000498722 COPRSQ9NQ92 184 aa19.97■□□□□ 0.79
LMNA-217ENST00000498722 ZBTB12Q9Y330 459 aaPredicted RBP19.97■□□□□ 0.79
LMNA-217ENST00000498722 PCDHB15Q9Y5E8 787 aa19.97■□□□□ 0.79
LMNA-217ENST00000498722 EPS15P42566 896 aa19.96■□□□□ 0.79
LMNA-217ENST00000498722 ATG9AQ7Z3C6 839 aa19.96■□□□□ 0.79
LMNA-217ENST00000498722 VPS37DQ86XT2 251 aa19.96■□□□□ 0.79
LMNA-217ENST00000498722 GPRC5DQ9NZD1 345 aa19.96■□□□□ 0.79
LMNA-217ENST00000498722 CEP126Q9P2H0 1117 aa19.96■□□□□ 0.79
LMNA-217ENST00000498722 FBXO3Q9UK99 471 aa19.96■□□□□ 0.79
LMNA-217ENST00000498722 ARAP2Q8WZ64 1704 aa19.95■□□□□ 0.78
LMNA-217ENST00000498722 USP17L3A6NCW0 530 aa19.95■□□□□ 0.78
LMNA-217ENST00000498722 USP17L4A6NCW7 530 aa19.95■□□□□ 0.78
LMNA-217ENST00000498722 IGHDP01880 384 aa19.95■□□□□ 0.78
LMNA-217ENST00000498722 IL15P40933 162 aaPredicted RBP19.95■□□□□ 0.78
LMNA-217ENST00000498722 PUM3Q15397 648 aaKnown RBP19.95■□□□□ 0.78
LMNA-217ENST00000498722 C15orf52Q6ZUT6 534 aaKnown RBP19.95■□□□□ 0.78
LMNA-217ENST00000498722 USP17L1Q7RTZ2 530 aa19.95■□□□□ 0.78
LMNA-217ENST00000498722 VGLL2Q8N8G2 317 aa19.95■□□□□ 0.78
LMNA-217ENST00000498722 CLEC11AQ9Y240 323 aa19.95■□□□□ 0.78
LMNA-217ENST00000498722 POLR2AP24928 1970 aaKnown RBP19.94■□□□□ 0.78
LMNA-217ENST00000498722 IFIT1P09914 478 aaKnown RBP19.94■□□□□ 0.78
LMNA-217ENST00000498722 GYG1P46976 350 aa19.94■□□□□ 0.78
LMNA-217ENST00000498722 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
LMNA-217ENST00000498722 OS9Q13438 667 aaPredicted RBP19.94■□□□□ 0.78
LMNA-217ENST00000498722 HDAC1Q13547 482 aaPredicted RBP19.94■□□□□ 0.78
LMNA-217ENST00000498722 RBM46Q8TBY0 533 aaKnown RBP19.94■□□□□ 0.78
LMNA-217ENST00000498722 CD209Q9NNX6 404 aa19.94■□□□□ 0.78
LMNA-217ENST00000498722 SLC5A1P13866 664 aa19.93■□□□□ 0.78
LMNA-217ENST00000498722 G3BP1Q13283 466 aaKnown RBP eCLIP19.93■□□□□ 0.785e-9■■□□□ 13.5
LMNA-217ENST00000498722 CAVIN4Q5BKX8 364 aa19.93■□□□□ 0.78
LMNA-217ENST00000498722 PNMA8AQ86V59 439 aaPredicted RBP19.93■□□□□ 0.78
LMNA-217ENST00000498722 MICALL2Q8IY33 904 aa19.93■□□□□ 0.78
LMNA-217ENST00000498722 SMC1BQ8NDV3 1235 aa19.93■□□□□ 0.78
LMNA-217ENST00000498722 CNOT7Q9UIV1 285 aaKnown RBP19.93■□□□□ 0.78
LMNA-217ENST00000498722 IRS2Q9Y4H2 1338 aa19.93■□□□□ 0.78
LMNA-217ENST00000498722 H7C1D1 291 aa19.92■□□□□ 0.78
LMNA-217ENST00000498722 VIL1P09327 827 aaKnown RBP19.92■□□□□ 0.78
LMNA-217ENST00000498722 POTEIP0CG38 1075 aa19.92■□□□□ 0.78
LMNA-217ENST00000498722 POTEJP0CG39 1038 aa19.92■□□□□ 0.78
LMNA-217ENST00000498722 RPS12P25398 132 aaKnown RBP19.92■□□□□ 0.78
LMNA-217ENST00000498722 HIBADHP31937 336 aaKnown RBP19.92■□□□□ 0.78
LMNA-217ENST00000498722 GTF2IP78347 998 aa19.92■□□□□ 0.78
LMNA-217ENST00000498722 ATP2B3Q16720 1220 aa19.92■□□□□ 0.78
LMNA-217ENST00000498722 TTLL5Q6EMB2 1281 aa19.92■□□□□ 0.78
LMNA-217ENST00000498722 RSBN1LQ6PCB5 846 aaPredicted RBP19.92■□□□□ 0.78
LMNA-217ENST00000498722 ADAMTSL1Q8N6G6 1762 aa19.91■□□□□ 0.78
LMNA-217ENST00000498722 SHTN1A0MZ66 631 aa19.91■□□□□ 0.78
LMNA-217ENST00000498722 FRAT2O75474 233 aaPredicted RBP19.91■□□□□ 0.78
LMNA-217ENST00000498722 CEP85Q6P2H3 762 aa19.91■□□□□ 0.78
LMNA-217ENST00000498722 SSH3Q8TE77 659 aa19.91■□□□□ 0.78
LMNA-217ENST00000498722 ADARB2Q9NS39 739 aaKnown RBP19.91■□□□□ 0.78
LMNA-217ENST00000498722 SURF6O75683 361 aaKnown RBP19.9■□□□□ 0.78
LMNA-217ENST00000498722 POLA2Q14181 598 aa19.9■□□□□ 0.78
LMNA-217ENST00000498722 STRIP1Q5VSL9 837 aa19.9■□□□□ 0.78
LMNA-217ENST00000498722 LDHDQ86WU2 507 aa19.9■□□□□ 0.78
LMNA-217ENST00000498722 LPIN2Q92539 896 aa19.9■□□□□ 0.78
LMNA-217ENST00000498722 DPF2Q92785 391 aa19.9■□□□□ 0.78
LMNA-217ENST00000498722 FAM84BQ96KN1 310 aaPredicted RBP19.9■□□□□ 0.78
LMNA-217ENST00000498722 MXD3Q9BW11 206 aa19.9■□□□□ 0.78
LMNA-217ENST00000498722 IQSEC3Q9UPP2 1182 aaPredicted RBP19.9■□□□□ 0.78
LMNA-217ENST00000498722 JAG2Q9Y219 1238 aa19.9■□□□□ 0.78
LMNA-217ENST00000498722 IL1R1P14778 569 aa19.89■□□□□ 0.77
LMNA-217ENST00000498722 TFCP2Q12800 502 aa19.89■□□□□ 0.77
LMNA-217ENST00000498722 DACT2Q5SW24 774 aa19.89■□□□□ 0.77
LMNA-217ENST00000498722 RBM26Q5T8P6 1007 aaKnown RBP19.89■□□□□ 0.77
LMNA-217ENST00000498722 CHADLQ6NUI6 762 aa19.89■□□□□ 0.77
LMNA-217ENST00000498722 USP50Q70EL3 339 aaPredicted RBP19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms