RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 SKOR2Q2VWA4 1001 aaPredicted RBP4.86□□□□□ -1.63
CLTC-209ENST00000498711 NAALADL2Q58DX5 795 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 TMEM57Q8N5G2 664 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 FOXJ1Q92949 421 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 GCC1Q96CN9 775 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 IL17RAQ96F46 866 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 PPP1R9BQ96SB3 815 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 RBCK1Q9BYM8 510 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 NRKQ7Z2Y5 1582 aa4.86□□□□□ -1.63
CLTC-209ENST00000498711 EIF5BO60841 1220 aaKnown RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 CANXP27824 592 aaKnown RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 MRPL58Q14197 206 aaKnown RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 NAA30Q147X3 362 aaPredicted RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 C4orf48Q5BLP8 95 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 TMC7Q7Z402 723 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.85□□□□□ -1.63
CLTC-209ENST00000498711 UBXN4Q92575 508 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 CHMP4BQ9H444 224 aaKnown RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 WBP1LQ9NX94 342 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 FAM205CA6NFA0 338 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 UBAP1LF5GYI3 381 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 NDUFB5O43674 189 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 VAMP4O75379 141 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 CYP2E1P05181 493 aaPredicted RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 ERCC5P28715 1186 aaPredicted RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 LINC01559Q495D7 138 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 CHD1LQ86WJ1 897 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 HS3ST6Q96QI5 342 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 C1QTNF2Q9BXJ5 285 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 ZNF358Q9NW07 568 aa4.85□□□□□ -1.63
CLTC-209ENST00000498711 TRPM3Q9HCF6 1732 aaPredicted RBP4.85□□□□□ -1.63
CLTC-209ENST00000498711 SCAMP3O14828 347 aaKnown RBP4.84□□□□□ -1.63
CLTC-209ENST00000498711 TMEM132EQ6IEE7 984 aa4.84□□□□□ -1.63
CLTC-209ENST00000498711 TRMT44Q8IYL2 757 aaKnown RBP4.84□□□□□ -1.63
CLTC-209ENST00000498711 ZPR1O75312 459 aa4.84□□□□□ -1.63
CLTC-209ENST00000498711 U2AF1L5P0DN76 240 aaPredicted RBP4.84□□□□□ -1.63
CLTC-209ENST00000498711 TERF1P54274 439 aa4.84□□□□□ -1.63
CLTC-209ENST00000498711 FGD1P98174 961 aa4.84□□□□□ -1.63
CLTC-209ENST00000498711 U2AF1Q01081 240 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLTC-209ENST00000498711 SPNS2Q8IVW8 549 aa4.84□□□□□ -1.63
CLTC-209ENST00000498711 SIRT2Q8IXJ6 389 aa4.84□□□□□ -1.63
CLTC-209ENST00000498711 SLKQ9H2G2 1235 aaPredicted RBP4.84□□□□□ -1.63
CLTC-209ENST00000498711 MON2Q7Z3U7 1717 aa4.84□□□□□ -1.64
CLTC-209ENST00000498711 ALS2Q96Q42 1657 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 TREHO43280 583 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 FMR1Q06787 632 aaKnown RBP eCLIP4.83□□□□□ -1.641e-7■□□□□ 9.5
CLTC-209ENST00000498711 TNPO1Q92973 898 aaKnown RBP4.83□□□□□ -1.64
CLTC-209ENST00000498711 TSR2Q969E8 191 aaKnown RBP4.83□□□□□ -1.64
CLTC-209ENST00000498711 MARVELD3Q96A59 401 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 GRPEL1Q9HAV7 217 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 SMC4Q9NTJ3 1288 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 IFT57Q9NWB7 429 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 AKAP12Q02952 1782 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 C1orf167Q5SNV9 1468 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 PXDNQ92626 1479 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 TUBGCP6Q96RT7 1819 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 DIAPH1O60610 1272 aaKnown RBP4.83□□□□□ -1.64
CLTC-209ENST00000498711 MPSTP25325 297 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 IL13P35225 146 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 HSCBQ8IWL3 235 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 CITED4Q96RK1 184 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 SLC6A16Q9GZN6 736 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 C19orf44Q9H6X5 657 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 RGPD1P0DJD0 1748 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 RGS12O14924 1447 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 RIPK4P57078 832 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 ZNF445P59923 1031 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 NFE2L2Q16236 605 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 HS1BP3Q53T59 392 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 GAS2L3Q86XJ1 694 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 FTSJ3Q8IY81 847 aaKnown RBP4.83□□□□□ -1.64
CLTC-209ENST00000498711 SCG3Q8WXD2 468 aaKnown RBP4.83□□□□□ -1.64
CLTC-209ENST00000498711 VTI1AQ96AJ9 217 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 TERF2IPQ9NYB0 399 aa4.83□□□□□ -1.64
CLTC-209ENST00000498711 TMEM229AB2RXF0 380 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 BACH1O14867 736 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 RAB15P59190 212 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 HDLBPQ00341 1268 aaKnown RBP4.82□□□□□ -1.64
CLTC-209ENST00000498711 INTS3Q68E01 1043 aaKnown RBP4.82□□□□□ -1.64
CLTC-209ENST00000498711 GAS2L2Q8NHY3 880 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 KCTD15Q96SI1 283 aaPredicted RBP4.82□□□□□ -1.64
CLTC-209ENST00000498711 DCTPP1Q9H773 170 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 POLKQ9UBT6 870 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 NRAPQ86VF7 1730 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 K7ELQ4 463 aaPredicted RBP4.82□□□□□ -1.64
CLTC-209ENST00000498711 WASLO00401 505 aaPredicted RBP4.82□□□□□ -1.64
CLTC-209ENST00000498711 SCTRP47872 440 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 CALD1Q05682 793 aaKnown RBP4.82□□□□□ -1.64
CLTC-209ENST00000498711 DMRTB1Q96MA1 342 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 PANK2Q9BZ23 570 aa4.82□□□□□ -1.64
CLTC-209ENST00000498711 PPP1R1BQ9UD71 204 aaPredicted RBP4.82□□□□□ -1.64
CLTC-209ENST00000498711 SBNO1A3KN83 1393 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 DLG5Q8TDM6 1919 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 EDC4Q6P2E9 1401 aaKnown RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 ATP10DQ9P241 1426 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 RGPD3A6NKT7 1758 aaPredicted RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 COL14A1Q05707 1796 aaKnown RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 RGPD4Q7Z3J3 1758 aa4.81□□□□□ -1.64
CLTC-209ENST00000498711 XPCQ01831 940 aaPredicted RBP4.81□□□□□ -1.64
CLTC-209ENST00000498711 C16orf46Q6P387 395 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms