RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 RBM26Q5T8P6 1007 aaKnown RBP6.85□□□□□ -1.31
CSTF1-207ENST00000498689 TMEM92Q6UXU6 159 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 NUTM1Q86Y26 1132 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 IFNL2Q8IZJ0 200 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 DCPSQ96C86 337 aaKnown RBP6.85□□□□□ -1.31
CSTF1-207ENST00000498689 ZFP91Q96JP5 570 aaPredicted RBP6.85□□□□□ -1.31
CSTF1-207ENST00000498689 TTYH1Q9H313 450 aaPredicted RBP6.85□□□□□ -1.31
CSTF1-207ENST00000498689 LTBP2Q14767 1821 aa6.85□□□□□ -1.31
CSTF1-207ENST00000498689 DOCK3Q8IZD9 2030 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 RTL1A6NKG5 1358 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 OTOFQ9HC10 1997 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 PPIP5K2O43314 1243 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 ST5P78524 1137 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 FOXK2Q01167 660 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 SP3Q02447 781 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 TMEM31Q5JXX7 168 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 PRAMEF18Q5VWM3 479 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 KHSRPQ92945 711 aaKnown RBP eCLIP6.84□□□□□ -1.31
CSTF1-207ENST00000498689 ARHGAP39Q9C0H5 1083 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 PSME4Q14997 1843 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 MAST4O15021 2626 aa6.84□□□□□ -1.31
CSTF1-207ENST00000498689 MAP1BP46821 2468 aaKnown RBP6.84□□□□□ -1.32
CSTF1-207ENST00000498689 EVC2Q86UK5 1308 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 CDHR2Q9BYE9 1310 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 PRAMEF22A3QJZ6 481 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 YDJCA8MPS7 323 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 ERVV-2B6SEH9 535 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 H7C1D1 291 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 TCERG1O14776 1098 aaKnown RBP6.83□□□□□ -1.32
CSTF1-207ENST00000498689 RGL2O15211 777 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 NPHP1O15259 732 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 CANXP27824 592 aaKnown RBP6.83□□□□□ -1.32
CSTF1-207ENST00000498689 COL9A2Q14055 689 aaPredicted RBP6.83□□□□□ -1.32
CSTF1-207ENST00000498689 ASB2Q96Q27 587 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 GGA3Q9NZ52 723 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 ZNRF3Q9ULT6 936 aa6.83□□□□□ -1.32
CSTF1-207ENST00000498689 EDC4Q6P2E9 1401 aaKnown RBP6.83□□□□□ -1.32
CSTF1-207ENST00000498689 RAB3GAP2Q9H2M9 1393 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 DDX60Q8IY21 1712 aaKnown RBP6.82□□□□□ -1.32
CSTF1-207ENST00000498689 AK9Q5TCS8 1911 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 PLXNA1Q9UIW2 1896 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 KLRG2A4D1S0 409 aaPredicted RBP6.82□□□□□ -1.32
CSTF1-207ENST00000498689 CCL5P13501 91 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 RNF166Q96A37 237 aaPredicted RBP6.82□□□□□ -1.32
CSTF1-207ENST00000498689 RNF25Q96BH1 459 aaPredicted RBP6.82□□□□□ -1.32
CSTF1-207ENST00000498689 MS4A4AQ96JQ5 239 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.82□□□□□ -1.32
CSTF1-207ENST00000498689 TBC1D2BQ9UPU7 963 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 KIF20BQ96Q89 1820 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 RIC1Q4ADV7 1423 aa6.82□□□□□ -1.32
CSTF1-207ENST00000498689 GCN1Q92616 2671 aaKnown RBP6.82□□□□□ -1.32
CSTF1-207ENST00000498689 LRRC37A2A6NM11 1700 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 NUP98P52948 1817 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 ALDH1A1P00352 501 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 GJB1P08034 283 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 PTPN12Q05209 780 aaKnown RBP6.81□□□□□ -1.32
CSTF1-207ENST00000498689 SPRYD7Q5W111 196 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 SULF1Q8IWU6 871 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 DIS3LQ8TF46 1054 aaKnown RBP6.81□□□□□ -1.32
CSTF1-207ENST00000498689 SETDB2Q96T68 719 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 FZD1Q9UP38 647 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 GBF1Q92538 1859 aa6.81□□□□□ -1.32
CSTF1-207ENST00000498689 EIF5P55010 431 aaKnown RBP6.8□□□□□ -1.32
CSTF1-207ENST00000498689 CABP4P57796 275 aa6.8□□□□□ -1.32
CSTF1-207ENST00000498689 FKBP1BP68106 108 aa6.8□□□□□ -1.32
CSTF1-207ENST00000498689 U2AF1L4Q8WU68 220 aaKnown RBP6.8□□□□□ -1.32
CSTF1-207ENST00000498689 PPM1EQ8WY54 764 aa6.8□□□□□ -1.32
CSTF1-207ENST00000498689 PAWRQ96IZ0 340 aaKnown RBP6.8□□□□□ -1.32
CSTF1-207ENST00000498689 RNF208Q9H0X6 261 aa6.8□□□□□ -1.32
CSTF1-207ENST00000498689 USP24Q9UPU5 2620 aa6.8□□□□□ -1.32
CSTF1-207ENST00000498689 GPR179Q6PRD1 2367 aa6.8□□□□□ -1.32
CSTF1-207ENST00000498689 ACACBO00763 2458 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 SMIM22K7EJ46 135 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 GPR37L1O60883 481 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 MDM2Q00987 491 aaPredicted RBP6.79□□□□□ -1.32
CSTF1-207ENST00000498689 PRKG1Q13976 671 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 ARSIQ5FYB1 569 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 ANGEL2Q5VTE6 544 aaKnown RBP6.79□□□□□ -1.32
CSTF1-207ENST00000498689 NKX2-3Q8TAU0 364 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 ATXN2LQ8WWM7 1075 aaKnown RBP6.79□□□□□ -1.32
CSTF1-207ENST00000498689 PTPN18Q99952 460 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 RALYQ9UKM9 306 aaKnown RBP6.79□□□□□ -1.32
CSTF1-207ENST00000498689 PTPRZ1P23471 2315 aaPredicted RBP6.79□□□□□ -1.32
CSTF1-207ENST00000498689 ASPMQ8IZT6 3477 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 KIF24Q5T7B8 1368 aa6.79□□□□□ -1.32
CSTF1-207ENST00000498689 DUOX1Q9NRD9 1551 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 FRYLO94915 3013 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 MAST2Q6P0Q8 1798 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 FLNBO75369 2602 aaKnown RBP6.78□□□□□ -1.32
CSTF1-207ENST00000498689 PSMD14O00487 310 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 ALDH1B1P30837 517 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 TTLL12Q14166 644 aaPredicted RBP6.78□□□□□ -1.32
CSTF1-207ENST00000498689 MAP3K11Q16584 847 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 KIF4BQ2VIQ3 1234 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 ZNF687Q8N1G0 1237 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 FBXL18Q96ME1 805 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 UNC93B1Q9H1C4 597 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 SLC12A5Q9H2X9 1139 aa6.78□□□□□ -1.32
CSTF1-207ENST00000498689 ZSWIM6Q9HCJ5 1215 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms