RNA–Protein interactions for RNA: ENST00000498443.5

TSPAN1-209, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 1,071 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-209ENST00000498443 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 GPSM2P81274 684 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 CIAPIN1Q6FI81 312 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 LMBR1LQ6UX01 489 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 TMEM57Q8N5G2 664 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 ANKRD44Q8N8A2 993 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 CHMP3Q9Y3E7 222 aa12.54□□□□□ -0.4
TSPAN1-209ENST00000498443 CSF1RP07333 972 aa12.53□□□□□ -0.4
TSPAN1-209ENST00000498443 MAP2K2P36507 400 aa12.53□□□□□ -0.4
TSPAN1-209ENST00000498443 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
TSPAN1-209ENST00000498443 PUS3Q9BZE2 481 aaKnown RBP12.53□□□□□ -0.4
TSPAN1-209ENST00000498443 BICC1Q9H694 974 aaKnown RBP12.53□□□□□ -0.4
TSPAN1-209ENST00000498443 ATP6V0A2Q9Y487 856 aa12.53□□□□□ -0.4
TSPAN1-209ENST00000498443 PDE4DIPQ5VU43 2346 aa12.53□□□□□ -0.4
TSPAN1-209ENST00000498443 ITGA6P23229 1130 aa12.52□□□□□ -0.41
TSPAN1-209ENST00000498443 SCNN1DP51172 638 aa12.52□□□□□ -0.41
TSPAN1-209ENST00000498443 NBR1Q14596 966 aa12.52□□□□□ -0.41
TSPAN1-209ENST00000498443 LARGE2Q8N3Y3 721 aa12.52□□□□□ -0.41
TSPAN1-209ENST00000498443 HELBQ8NG08 1087 aaPredicted RBP12.52□□□□□ -0.41
TSPAN1-209ENST00000498443 PLA2G12BQ9BX93 195 aa12.52□□□□□ -0.41
TSPAN1-209ENST00000498443 API5Q9BZZ5 524 aaKnown RBP12.52□□□□□ -0.41
TSPAN1-209ENST00000498443 CA12O43570 354 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 SP8Q8IXZ3 490 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 GLIS2Q9BZE0 524 aaPredicted RBP12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 C1orf115Q9H7X2 142 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 KCNQ5Q9NR82 932 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 POLLQ9UGP5 575 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 UTYO14607 1347 aa12.51□□□□□ -0.41
TSPAN1-209ENST00000498443 RIMBP2O15034 1052 aa12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 BBOX1O75936 387 aa12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 KLRK1P26718 216 aa12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 AOC3Q16853 763 aa12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 USP50Q70EL3 339 aaPredicted RBP12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 NSFL1CQ9UNZ2 370 aaKnown RBP12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 LRRFIP2Q9Y608 721 aaKnown RBP12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 SPEF2Q9C093 1822 aa12.5□□□□□ -0.41
TSPAN1-209ENST00000498443 TAF5LO75529 589 aa12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 DEKP35659 375 aaKnown RBP12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 ANKRD18AQ8IVF6 992 aa12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 NIM1KQ8IY84 436 aa12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 MPNDQ8N594 471 aa12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 ZIC5Q96T25 663 aa12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 MINPP1Q9UNW1 487 aa12.49□□□□□ -0.41
TSPAN1-209ENST00000498443 DUOX1Q9NRD9 1551 aa12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 DOK7Q18PE1 504 aa12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 LRRC24Q50LG9 513 aa12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 DPP8Q6V1X1 898 aaPredicted RBP12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 TXNRD3Q86VQ6 643 aa12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 ZBTB40Q9NUA8 1239 aa12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 PA2G4Q9UQ80 394 aaKnown RBP12.48□□□□□ -0.41
TSPAN1-209ENST00000498443 PPIP5K2O43314 1243 aa12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 RFX5P48382 616 aaPredicted RBP12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 PRPF38BQ5VTL8 546 aaKnown RBP12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 TBC1D16Q8TBP0 767 aa12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 GCC1Q96CN9 775 aa12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 PSMD1Q99460 953 aa12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 ADARB2Q9NS39 739 aaKnown RBP12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.47□□□□□ -0.41
TSPAN1-209ENST00000498443 ANKRD18BA2A2Z9 1011 aa12.46□□□□□ -0.41
TSPAN1-209ENST00000498443 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
TSPAN1-209ENST00000498443 UBTFL1P0CB47 393 aaPredicted RBP12.46□□□□□ -0.41
TSPAN1-209ENST00000498443 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
TSPAN1-209ENST00000498443 DBNDD1Q9H9R9 158 aa12.46□□□□□ -0.41
TSPAN1-209ENST00000498443 MYH3P11055 1940 aa12.46□□□□□ -0.42
TSPAN1-209ENST00000498443 PNMA6EA0A0J9YXQ4 647 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 SHTN1A0MZ66 631 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 YDJCA8MPS7 323 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 ZBTB7BO15156 539 aaPredicted RBP12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 UFL1O94874 794 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 HUNKP57058 714 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 CHRNDQ07001 517 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 IFIT5Q13325 482 aaKnown RBP12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 DLK2Q6UY11 383 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 SKAP1Q86WV1 359 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 RTFDC1Q9BY42 306 aaPredicted RBP12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 BSDC1Q9NW68 430 aaPredicted RBP12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 GPRC5DQ9NZD1 345 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 ANKIB1Q9P2G1 1089 aa12.45□□□□□ -0.42
TSPAN1-209ENST00000498443 RTL9Q8NET4 1388 aa12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 TRPA1O75762 1119 aa12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 RAD17O75943 681 aa12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 IGHMBP2P38935 993 aaKnown RBP12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 GMPSP49915 693 aaPredicted RBP12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 NOGQ13253 232 aa12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 CCDC57Q2TAC2 916 aa12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 MXD3Q9BW11 206 aa12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 SIL1Q9H173 461 aa12.44□□□□□ -0.42
TSPAN1-209ENST00000498443 PTPN12Q05209 780 aaKnown RBP12.43□□□□□ -0.42
TSPAN1-209ENST00000498443 LDHAL6AQ6ZMR3 332 aa12.43□□□□□ -0.42
TSPAN1-209ENST00000498443 USP48Q86UV5 1035 aa12.43□□□□□ -0.42
TSPAN1-209ENST00000498443 TBC1D32Q96NH3 1257 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms