RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 UBE2Q2LH0YL09 131 aa20.72■□□□□ 0.91
MUC1-220ENST00000498431 DDX58O95786 925 aaKnown RBP20.72■□□□□ 0.91
MUC1-220ENST00000498431 CTU1Q7Z7A3 348 aaKnown RBP20.72■□□□□ 0.91
MUC1-220ENST00000498431 DACT2Q5SW24 774 aa20.71■□□□□ 0.91
MUC1-220ENST00000498431 CCDC30Q5VVM6 783 aa20.71■□□□□ 0.91
MUC1-220ENST00000498431 CDC5LQ99459 802 aaKnown RBP20.71■□□□□ 0.91
MUC1-220ENST00000498431 PRKRIP1Q9H875 184 aaPredicted RBP20.71■□□□□ 0.91
MUC1-220ENST00000498431 PI4KAP2A4QPH2 592 aa20.7■□□□□ 0.9
MUC1-220ENST00000498431 CALD1Q05682 793 aaKnown RBP20.7■□□□□ 0.9
MUC1-220ENST00000498431 CWF19L2Q2TBE0 894 aaKnown RBP20.7■□□□□ 0.9
MUC1-220ENST00000498431 TXNRD3Q86VQ6 643 aa20.7■□□□□ 0.9
MUC1-220ENST00000498431 REM2Q8IYK8 340 aaPredicted RBP20.7■□□□□ 0.9
MUC1-220ENST00000498431 PI4KAP1Q8N8J0 262 aa20.7■□□□□ 0.9
MUC1-220ENST00000498431 BSDC1Q9NW68 430 aaPredicted RBP20.7■□□□□ 0.9
MUC1-220ENST00000498431 WNT10BO00744 389 aa20.69■□□□□ 0.9
MUC1-220ENST00000498431 CCT4P50991 539 aaKnown RBP20.69■□□□□ 0.9
MUC1-220ENST00000498431 KSR2Q6VAB6 950 aa20.69■□□□□ 0.9
MUC1-220ENST00000498431 FBXW7Q969H0 707 aa20.69■□□□□ 0.9
MUC1-220ENST00000498431 TBC1D8O95759 1140 aa20.68■□□□□ 0.9
MUC1-220ENST00000498431 SASH1O94885 1247 aa20.67■□□□□ 0.9
MUC1-220ENST00000498431 KLRK1P26718 216 aa20.67■□□□□ 0.9
MUC1-220ENST00000498431 MKRN3Q13064 507 aaKnown RBP20.67■□□□□ 0.9
MUC1-220ENST00000498431 ZNF296Q8WUU4 475 aaPredicted RBP20.67■□□□□ 0.9
MUC1-220ENST00000498431 TSR2Q969E8 191 aaKnown RBP20.67■□□□□ 0.9
MUC1-220ENST00000498431 HPS5Q9UPZ3 1129 aa20.67■□□□□ 0.9
MUC1-220ENST00000498431 HTTP42858 3142 aa20.67■□□□□ 0.9
MUC1-220ENST00000498431 NEURL1BA8MQ27 555 aa20.66■□□□□ 0.9
MUC1-220ENST00000498431 TTLL12Q14166 644 aaPredicted RBP20.66■□□□□ 0.9
MUC1-220ENST00000498431 STRIP1Q5VSL9 837 aa20.66■□□□□ 0.9
MUC1-220ENST00000498431 G2E3Q7L622 706 aa20.66■□□□□ 0.9
MUC1-220ENST00000498431 UBE3BQ7Z3V4 1068 aa20.66■□□□□ 0.9
MUC1-220ENST00000498431 OGFOD1Q8N543 542 aa20.65■□□□□ 0.9
MUC1-220ENST00000498431 COA1Q9GZY4 146 aa20.65■□□□□ 0.9
MUC1-220ENST00000498431 H7C1W4 665 aa20.64■□□□□ 0.89
MUC1-220ENST00000498431 NEXNQ0ZGT2 675 aa20.64■□□□□ 0.89
MUC1-220ENST00000498431 MYO3BQ8WXR4 1341 aa20.63■□□□□ 0.89
MUC1-220ENST00000498431 TM4SF4P48230 202 aa20.63■□□□□ 0.89
MUC1-220ENST00000498431 PTPN12Q05209 780 aaKnown RBP20.63■□□□□ 0.89
MUC1-220ENST00000498431 PRKG1Q13976 671 aa20.63■□□□□ 0.89
MUC1-220ENST00000498431 HDAC9Q9UKV0 1011 aa20.63■□□□□ 0.89
MUC1-220ENST00000498431 LEMD3Q9Y2U8 911 aa20.63■□□□□ 0.89
MUC1-220ENST00000498431 ZNF804BA4D1E1 1349 aa20.62■□□□□ 0.89
MUC1-220ENST00000498431 TTLL5Q6EMB2 1281 aa20.62■□□□□ 0.89
MUC1-220ENST00000498431 KIAA0825Q8IV33 1275 aa20.62■□□□□ 0.89
MUC1-220ENST00000498431 ZBED3Q96IU2 234 aaPredicted RBP20.62■□□□□ 0.89
MUC1-220ENST00000498431 STK31Q9BXU1 1019 aa20.62■□□□□ 0.89
MUC1-220ENST00000498431 CHMP4AQ9BY43 222 aa20.62■□□□□ 0.89
MUC1-220ENST00000498431 R3HDMLQ9H3Y0 253 aa20.62■□□□□ 0.89
MUC1-220ENST00000498431 FZD1Q9UP38 647 aa20.62■□□□□ 0.89
MUC1-220ENST00000498431 GPR25O00155 361 aa20.61■□□□□ 0.89
MUC1-220ENST00000498431 ITGA6P23229 1130 aa20.61■□□□□ 0.89
MUC1-220ENST00000498431 NF2P35240 595 aa20.61■□□□□ 0.89
MUC1-220ENST00000498431 IGHMBP2P38935 993 aaKnown RBP20.61■□□□□ 0.89
MUC1-220ENST00000498431 CASP7P55210 303 aa20.61■□□□□ 0.89
MUC1-220ENST00000498431 CENPFP49454 3210 aa20.61■□□□□ 0.89
MUC1-220ENST00000498431 MKI67P46013 3256 aaKnown RBP20.61■□□□□ 0.89
MUC1-220ENST00000498431 SNAP23O00161 211 aa20.6■□□□□ 0.89
MUC1-220ENST00000498431 GTF2IP78347 998 aa20.6■□□□□ 0.89
MUC1-220ENST00000498431 GCKRQ14397 625 aa20.6■□□□□ 0.89
MUC1-220ENST00000498431 PLA2G12BQ9BX93 195 aa20.6■□□□□ 0.89
MUC1-220ENST00000498431 SLC4A2P04920 1241 aa20.59■□□□□ 0.89
MUC1-220ENST00000498431 PKN2Q16513 984 aaKnown RBP20.59■□□□□ 0.89
MUC1-220ENST00000498431 TWISTNBQ3B726 338 aaPredicted RBP20.59■□□□□ 0.89
MUC1-220ENST00000498431 LDLRAD1Q5T700 205 aa20.59■□□□□ 0.89
MUC1-220ENST00000498431 APOBEC3FQ8IUX4 373 aaKnown RBP20.59■□□□□ 0.89
MUC1-220ENST00000498431 CHRNDQ07001 517 aa20.58■□□□□ 0.89
MUC1-220ENST00000498431 CCDC184Q52MB2 194 aa20.58■□□□□ 0.89
MUC1-220ENST00000498431 NOM1Q5C9Z4 860 aaKnown RBP20.58■□□□□ 0.89
MUC1-220ENST00000498431 ARMC9Q7Z3E5 817 aa20.58■□□□□ 0.89
MUC1-220ENST00000498431 ANKRD2Q9GZV1 360 aa20.58■□□□□ 0.89
MUC1-220ENST00000498431 PCDHAC2Q9Y5I4 1007 aa20.58■□□□□ 0.89
MUC1-220ENST00000498431 IRS2Q9Y4H2 1338 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 A0A1B0GUL6 1792 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 SSC5DA1L4H1 1573 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 CSF1RP07333 972 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 SREBF2Q12772 1141 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 SPRYD7Q5W111 196 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 CERS5Q8N5B7 392 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 MPHOSPH8Q99549 860 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 CD209Q9NNX6 404 aa20.57■□□□□ 0.88
MUC1-220ENST00000498431 ANGEL1Q9UNK9 670 aaKnown RBP20.57■□□□□ 0.88
MUC1-220ENST00000498431 MMP14P50281 582 aa20.56■□□□□ 0.88
MUC1-220ENST00000498431 FLIIQ13045 1269 aa20.56■□□□□ 0.88
MUC1-220ENST00000498431 PRPF38BQ5VTL8 546 aaKnown RBP20.56■□□□□ 0.88
MUC1-220ENST00000498431 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
MUC1-220ENST00000498431 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.56■□□□□ 0.88
MUC1-220ENST00000498431 FKTNO75072 461 aa20.55■□□□□ 0.88
MUC1-220ENST00000498431 TAF5LO75529 589 aa20.55■□□□□ 0.88
MUC1-220ENST00000498431 KCNJ4P48050 445 aa20.55■□□□□ 0.88
MUC1-220ENST00000498431 FBXO46Q6PJ61 603 aaPredicted RBP20.55■□□□□ 0.88
MUC1-220ENST00000498431 WWC1Q8IX03 1113 aa20.55■□□□□ 0.88
MUC1-220ENST00000498431 HELBQ8NG08 1087 aaPredicted RBP20.55■□□□□ 0.88
MUC1-220ENST00000498431 DEFB129Q9H1M3 183 aa20.55■□□□□ 0.88
MUC1-220ENST00000498431 PCDH10Q9P2E7 1040 aa20.55■□□□□ 0.88
MUC1-220ENST00000498431 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
MUC1-220ENST00000498431 DNAAF4Q8WXU2 420 aa20.54■□□□□ 0.88
MUC1-220ENST00000498431 CLMNQ96JQ2 1002 aa20.54■□□□□ 0.88
MUC1-220ENST00000498431 ECM29Q5VYK3 1845 aa20.54■□□□□ 0.88
MUC1-220ENST00000498431 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
MUC1-220ENST00000498431 AOX1Q06278 1338 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms