RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 FXR1P51114 621 aaKnown RBP eCLIP16.43■□□□□ 0.22
TRIM27-207ENST00000498117 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
TRIM27-207ENST00000498117 STRIP1Q5VSL9 837 aa16.43■□□□□ 0.22
TRIM27-207ENST00000498117 IFNL1Q8IU54 200 aa16.43■□□□□ 0.22
TRIM27-207ENST00000498117 APOBEC3FQ8IUX4 373 aaKnown RBP16.43■□□□□ 0.22
TRIM27-207ENST00000498117 SLC10A4Q96EP9 437 aa16.43■□□□□ 0.22
TRIM27-207ENST00000498117 ANGEL1Q9UNK9 670 aaKnown RBP16.43■□□□□ 0.22
TRIM27-207ENST00000498117 PCCAP05165 728 aaPredicted RBP16.42■□□□□ 0.22
TRIM27-207ENST00000498117 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
TRIM27-207ENST00000498117 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
TRIM27-207ENST00000498117 ERO1AQ96HE7 468 aa16.42■□□□□ 0.22
TRIM27-207ENST00000498117 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
TRIM27-207ENST00000498117 CDC5LQ99459 802 aaKnown RBP16.42■□□□□ 0.22
TRIM27-207ENST00000498117 MXD3Q9BW11 206 aa16.42■□□□□ 0.22
TRIM27-207ENST00000498117 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
TRIM27-207ENST00000498117 PSME4Q14997 1843 aa16.42■□□□□ 0.22
TRIM27-207ENST00000498117 MKI67P46013 3256 aaKnown RBP16.42■□□□□ 0.22
TRIM27-207ENST00000498117 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
TRIM27-207ENST00000498117 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
TRIM27-207ENST00000498117 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
TRIM27-207ENST00000498117 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
TRIM27-207ENST00000498117 SASH1O94885 1247 aa16.4■□□□□ 0.22
TRIM27-207ENST00000498117 ZBTB48P10074 688 aaPredicted RBP16.4■□□□□ 0.22
TRIM27-207ENST00000498117 DUSP27Q5VZP5 1158 aa16.4■□□□□ 0.22
TRIM27-207ENST00000498117 OTUD7BQ6GQQ9 843 aa16.4■□□□□ 0.22
TRIM27-207ENST00000498117 ARMC5Q96C12 935 aa16.4■□□□□ 0.22
TRIM27-207ENST00000498117 MYD88Q99836 296 aa16.4■□□□□ 0.22
TRIM27-207ENST00000498117 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
TRIM27-207ENST00000498117 TTLL5Q6EMB2 1281 aa16.39■□□□□ 0.21
TRIM27-207ENST00000498117 TMEM106CQ9BVX2 250 aa16.39■□□□□ 0.21
TRIM27-207ENST00000498117 EFCC1Q9HA90 598 aa16.39■□□□□ 0.21
TRIM27-207ENST00000498117 BSDC1Q9NW68 430 aaPredicted RBP16.39■□□□□ 0.21
TRIM27-207ENST00000498117 CWC25Q9NXE8 425 aaPredicted RBP16.39■□□□□ 0.21
TRIM27-207ENST00000498117 MINPP1Q9UNW1 487 aa16.39■□□□□ 0.21
TRIM27-207ENST00000498117 WTIPA6NIX2 430 aaPredicted RBP16.38■□□□□ 0.21
TRIM27-207ENST00000498117 UNCXA6NJT0 531 aa16.38■□□□□ 0.21
TRIM27-207ENST00000498117 PPP1R12BO60237 982 aaPredicted RBP16.38■□□□□ 0.21
TRIM27-207ENST00000498117 MAP3K11Q16584 847 aa16.38■□□□□ 0.21
TRIM27-207ENST00000498117 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
TRIM27-207ENST00000498117 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
TRIM27-207ENST00000498117 WNK4Q96J92 1243 aa16.38■□□□□ 0.21
TRIM27-207ENST00000498117 DEFB129Q9H1M3 183 aa16.38■□□□□ 0.21
TRIM27-207ENST00000498117 IGF2BP3O00425 579 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRIM27-207ENST00000498117 CCT4P50991 539 aaKnown RBP16.37■□□□□ 0.21
TRIM27-207ENST00000498117 KIAA0825Q8IV33 1275 aa16.37■□□□□ 0.21
TRIM27-207ENST00000498117 CD99L2Q8TCZ2 262 aa16.37■□□□□ 0.21
TRIM27-207ENST00000498117 ZBED3Q96IU2 234 aaPredicted RBP16.37■□□□□ 0.21
TRIM27-207ENST00000498117 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.37■□□□□ 0.21
TRIM27-207ENST00000498117 LEMD3Q9Y2U8 911 aa16.37■□□□□ 0.21
TRIM27-207ENST00000498117 SP3Q02447 781 aa16.36■□□□□ 0.21
TRIM27-207ENST00000498117 PHAXQ9H814 394 aaKnown RBP16.36■□□□□ 0.21
TRIM27-207ENST00000498117 FZD1Q9UP38 647 aa16.36■□□□□ 0.21
TRIM27-207ENST00000498117 TRIM35Q9UPQ4 493 aa16.36■□□□□ 0.21
TRIM27-207ENST00000498117 COLQQ9Y215 455 aaPredicted RBP16.36■□□□□ 0.21
TRIM27-207ENST00000498117 HTTP42858 3142 aa16.36■□□□□ 0.21
TRIM27-207ENST00000498117 CTSWP56202 376 aa16.35■□□□□ 0.21
TRIM27-207ENST00000498117 CRHR2Q13324 411 aa16.35■□□□□ 0.21
TRIM27-207ENST00000498117 ARHGEF6Q15052 776 aa16.35■□□□□ 0.21
TRIM27-207ENST00000498117 DLGAP5Q15398 846 aa16.35■□□□□ 0.21
TRIM27-207ENST00000498117 SUPT20HL1Q3ZLR7 823 aa16.35■□□□□ 0.21
TRIM27-207ENST00000498117 PPP2R3BQ9Y5P8 575 aa16.35■□□□□ 0.21
TRIM27-207ENST00000498117 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
TRIM27-207ENST00000498117 NBPF11Q86T75 865 aa16.34■□□□□ 0.21
TRIM27-207ENST00000498117 TXNRD3Q86VQ6 643 aa16.34■□□□□ 0.21
TRIM27-207ENST00000498117 CCDC146Q8IYE0 955 aa16.34■□□□□ 0.21
TRIM27-207ENST00000498117 TTLL11Q8NHH1 800 aa16.34■□□□□ 0.21
TRIM27-207ENST00000498117 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
TRIM27-207ENST00000498117 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-207ENST00000498117 DDX58O95786 925 aaKnown RBP16.33■□□□□ 0.2
TRIM27-207ENST00000498117 IREB2P48200 963 aaKnown RBP16.33■□□□□ 0.2
TRIM27-207ENST00000498117 GTF2IP78347 998 aa16.33■□□□□ 0.2
TRIM27-207ENST00000498117 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
TRIM27-207ENST00000498117 ZNF333Q96JL9 665 aa16.33■□□□□ 0.2
TRIM27-207ENST00000498117 CENPFP49454 3210 aa16.33■□□□□ 0.2
TRIM27-207ENST00000498117 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
TRIM27-207ENST00000498117 MYO1BO43795 1136 aa16.32■□□□□ 0.2
TRIM27-207ENST00000498117 IGHMBP2P38935 993 aaKnown RBP16.32■□□□□ 0.2
TRIM27-207ENST00000498117 SLC4A8Q2Y0W8 1093 aa16.32■□□□□ 0.2
TRIM27-207ENST00000498117 RBBP6Q7Z6E9 1792 aaKnown RBP16.32■□□□□ 0.2
TRIM27-207ENST00000498117 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
TRIM27-207ENST00000498117 GREM2Q9H772 168 aa16.32■□□□□ 0.2
TRIM27-207ENST00000498117 MBIPQ9NS73 344 aa16.32■□□□□ 0.2
TRIM27-207ENST00000498117 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
TRIM27-207ENST00000498117 PTPN18Q99952 460 aa16.31■□□□□ 0.2
TRIM27-207ENST00000498117 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
TRIM27-207ENST00000498117 ANKRD2Q9GZV1 360 aa16.31■□□□□ 0.2
TRIM27-207ENST00000498117 CEP290O15078 2479 aa16.31■□□□□ 0.2
TRIM27-207ENST00000498117 RALBP1Q15311 655 aa16.3■□□□□ 0.2
TRIM27-207ENST00000498117 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
TRIM27-207ENST00000498117 ANKRD13AQ8IZ07 590 aa16.3■□□□□ 0.2
TRIM27-207ENST00000498117 TRIOBPQ9H2D6 2365 aa16.3■□□□□ 0.2
TRIM27-207ENST00000498117 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-207ENST00000498117 USP2O75604 605 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-207ENST00000498117 GJA5P36382 358 aa16.29■□□□□ 0.2
TRIM27-207ENST00000498117 NBPF12Q5TAG4 269 aaPredicted RBP16.29■□□□□ 0.2
TRIM27-207ENST00000498117 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
TRIM27-207ENST00000498117 MAP3K2Q9Y2U5 619 aa16.29■□□□□ 0.2
TRIM27-207ENST00000498117 BRCA2P51587 3418 aa16.28■□□□□ 0.2
TRIM27-207ENST00000498117 H0YGN5 161 aa16.28■□□□□ 0.2
TRIM27-207ENST00000498117 KCNJ4P48050 445 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms