RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 MINPP1Q9UNW1 487 aa14.99□□□□□ -0.01
NUDCD3-211ENST00000497978 SCN9AQ15858 1988 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 USP17L3A6NCW0 530 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 USP17L4A6NCW7 530 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 EGFRP00533 1210 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 HSPA8P11142 646 aaKnown RBP14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 USP17L1Q7RTZ2 530 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 MPHOSPH8Q99549 860 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 THSD7BQ9C0I4 1608 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 MED23Q9ULK4 1368 aa14.98□□□□□ -0.01
NUDCD3-211ENST00000497978 SPEF2Q9C093 1822 aa14.97□□□□□ -0.01
NUDCD3-211ENST00000497978 ITGA6P23229 1130 aa14.97□□□□□ -0.01
NUDCD3-211ENST00000497978 CCT4P50991 539 aaKnown RBP14.97□□□□□ -0.01
NUDCD3-211ENST00000497978 SULF1Q8IWU6 871 aa14.97□□□□□ -0.01
NUDCD3-211ENST00000497978 ANKRD2Q9GZV1 360 aa14.97□□□□□ -0.01
NUDCD3-211ENST00000497978 LEMD3Q9Y2U8 911 aa14.97□□□□□ -0.01
NUDCD3-211ENST00000497978 ZNF609O15014 1411 aa14.97□□□□□ -0.01
NUDCD3-211ENST00000497978 AOC2O75106 756 aa14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 USP17L8P0C7I0 530 aa14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 HUNKP57058 714 aa14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 ZNF280AP59817 542 aaPredicted RBP14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 GGA3Q9NZ52 723 aa14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 POLR2AP24928 1970 aaKnown RBP14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 PSME4Q14997 1843 aa14.96□□□□□ -0.01
NUDCD3-211ENST00000497978 ANKRD18BA2A2Z9 1011 aa14.95□□□□□ -0.02
NUDCD3-211ENST00000497978 ADM5C9JUS6 153 aa14.95□□□□□ -0.02
NUDCD3-211ENST00000497978 CSF1RP07333 972 aa14.95□□□□□ -0.02
NUDCD3-211ENST00000497978 CASP7P55210 303 aa14.95□□□□□ -0.02
NUDCD3-211ENST00000497978 FAM161AQ3B820 660 aa14.95□□□□□ -0.02
NUDCD3-211ENST00000497978 COA1Q9GZY4 146 aa14.95□□□□□ -0.02
NUDCD3-211ENST00000497978 GBA2Q9HCG7 927 aaPredicted RBP14.95□□□□□ -0.02
NUDCD3-211ENST00000497978 CA12O43570 354 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 KCNJ4P48050 445 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 BRPF1P55201 1214 aaPredicted RBP14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 NOGQ13253 232 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 SCARF1Q14162 830 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 DLK2Q6UY11 383 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 FBXW7Q969H0 707 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 GMLQ99445 158 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 MYOZ2Q9NPC6 264 aa14.94□□□□□ -0.02
NUDCD3-211ENST00000497978 ZNF804BA4D1E1 1349 aa14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 MYO3BQ8WXR4 1341 aa14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 WTIPA6NIX2 430 aaPredicted RBP14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 F6X3S4 739 aa14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 IFIT5Q13325 482 aaKnown RBP14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 BEND3Q5T5X7 828 aa14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 STRIP1Q5VSL9 837 aa14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 ANGEL2Q5VTE6 544 aaKnown RBP14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 OGFOD1Q8N543 542 aa14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 CHMP3Q9Y3E7 222 aa14.93□□□□□ -0.02
NUDCD3-211ENST00000497978 RGMBQ6NW40 437 aa14.92□□□□□ -0.02
NUDCD3-211ENST00000497978 CCDC102AQ96A19 550 aa14.92□□□□□ -0.02
NUDCD3-211ENST00000497978 ASTN2O75129 1339 aaPredicted RBP14.92□□□□□ -0.02
NUDCD3-211ENST00000497978 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
NUDCD3-211ENST00000497978 MMP14P50281 582 aa14.91□□□□□ -0.02
NUDCD3-211ENST00000497978 CHRNDQ07001 517 aa14.91□□□□□ -0.02
NUDCD3-211ENST00000497978 DACT2Q5SW24 774 aa14.91□□□□□ -0.02
NUDCD3-211ENST00000497978 CDCA5Q96FF9 252 aa14.91□□□□□ -0.02
NUDCD3-211ENST00000497978 C9orf78Q9NZ63 289 aaPredicted RBP14.91□□□□□ -0.02
NUDCD3-211ENST00000497978 GRM8O00222 908 aa14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 ZNF157P51786 506 aaPredicted RBP14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 FOXO4P98177 505 aa14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 TTLL5Q6EMB2 1281 aa14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 SLC4A10Q6U841 1118 aa14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 TXNRD3Q86VQ6 643 aa14.9□□□□□ -0.02
NUDCD3-211ENST00000497978 ALDH1L1O75891 902 aa14.89□□□□□ -0.03
NUDCD3-211ENST00000497978 LMBR1LQ6UX01 489 aa14.89□□□□□ -0.03
NUDCD3-211ENST00000497978 MXD3Q9BW11 206 aa14.89□□□□□ -0.03
NUDCD3-211ENST00000497978 SRCIN1Q9C0H9 1055 aa14.89□□□□□ -0.03
NUDCD3-211ENST00000497978 TSKSQ9UJT2 592 aa14.89□□□□□ -0.03
NUDCD3-211ENST00000497978 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
NUDCD3-211ENST00000497978 KLRK1P26718 216 aa14.88□□□□□ -0.03
NUDCD3-211ENST00000497978 FKBP1BP68106 108 aa14.88□□□□□ -0.03
NUDCD3-211ENST00000497978 GTF2IP78347 998 aa14.88□□□□□ -0.03
NUDCD3-211ENST00000497978 FAM155AB1AL88 458 aaPredicted RBP14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 TAF5LO75529 589 aa14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 NBPF9Q3BBW0 867 aa14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 LDHAL6AQ6ZMR3 332 aa14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 ZNF804AQ7Z570 1209 aa14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 HELBQ8NG08 1087 aaPredicted RBP14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 CD209Q9NNX6 404 aa14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 CNNM1Q9NRU3 951 aa14.87□□□□□ -0.03
NUDCD3-211ENST00000497978 WNT10BO00744 389 aa14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 NF2P35240 595 aa14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 KIF23Q02241 960 aaPredicted RBP14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 C15orf52Q6ZUT6 534 aaKnown RBP14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 KIAA0825Q8IV33 1275 aa14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 ABHD8Q96I13 439 aa14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 ZIC5Q96T25 663 aa14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 ZNF521Q96K83 1311 aa14.86□□□□□ -0.03
NUDCD3-211ENST00000497978 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
NUDCD3-211ENST00000497978 E9PSI1 815 aa14.85□□□□□ -0.03
NUDCD3-211ENST00000497978 PLIN1O60240 522 aa14.85□□□□□ -0.03
NUDCD3-211ENST00000497978 SLC10A3P09131 477 aa14.85□□□□□ -0.03
NUDCD3-211ENST00000497978 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
NUDCD3-211ENST00000497978 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
NUDCD3-211ENST00000497978 EPHA10Q5JZY3 1008 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms