RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 LMBR1LQ6UX01 489 aa14.15□□□□□ -0.14
ERCC8-208ENST00000497892 VPS33BQ9H267 617 aa14.15□□□□□ -0.14
ERCC8-208ENST00000497892 BSDC1Q9NW68 430 aaPredicted RBP14.15□□□□□ -0.14
ERCC8-208ENST00000497892 PODXL2Q9NZ53 605 aa14.15□□□□□ -0.14
ERCC8-208ENST00000497892 NSFL1CQ9UNZ2 370 aaKnown RBP14.15□□□□□ -0.14
ERCC8-208ENST00000497892 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
ERCC8-208ENST00000497892 ANKRD18BA2A2Z9 1011 aa14.14□□□□□ -0.15
ERCC8-208ENST00000497892 G3V3G9 751 aa14.14□□□□□ -0.15
ERCC8-208ENST00000497892 PPIP5K2O43314 1243 aa14.14□□□□□ -0.15
ERCC8-208ENST00000497892 IFIT5Q13325 482 aaKnown RBP14.14□□□□□ -0.15
ERCC8-208ENST00000497892 BICC1Q9H694 974 aaKnown RBP14.14□□□□□ -0.15
ERCC8-208ENST00000497892 TNNQ9UQP3 1299 aa14.14□□□□□ -0.15
ERCC8-208ENST00000497892 XDHP47989 1333 aa14.14□□□□□ -0.15
ERCC8-208ENST00000497892 GLTPD2A6NH11 291 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 IGHMBP2P38935 993 aaKnown RBP14.13□□□□□ -0.15
ERCC8-208ENST00000497892 KIAA2012Q0VF49 1180 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 AOC3Q16853 763 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 LARGE2Q8N3Y3 721 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 ANKRD44Q8N8A2 993 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 JDP2Q8WYK2 163 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 CHMP3Q9Y3E7 222 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 ZNF541Q9H0D2 1346 aa14.13□□□□□ -0.15
ERCC8-208ENST00000497892 FZD9O00144 591 aa14.12□□□□□ -0.15
ERCC8-208ENST00000497892 UBTFL1P0CB47 393 aaPredicted RBP14.12□□□□□ -0.15
ERCC8-208ENST00000497892 CCDC57Q2TAC2 916 aa14.12□□□□□ -0.15
ERCC8-208ENST00000497892 TBC1D16Q8TBP0 767 aa14.12□□□□□ -0.15
ERCC8-208ENST00000497892 CLUAP1Q96AJ1 413 aa14.12□□□□□ -0.15
ERCC8-208ENST00000497892 ANKIB1Q9P2G1 1089 aa14.12□□□□□ -0.15
ERCC8-208ENST00000497892 POLLQ9UGP5 575 aa14.12□□□□□ -0.15
ERCC8-208ENST00000497892 MINPP1Q9UNW1 487 aa14.12□□□□□ -0.15
ERCC8-208ENST00000497892 UFL1O94874 794 aa14.11□□□□□ -0.15
ERCC8-208ENST00000497892 NIM1KQ8IY84 436 aa14.11□□□□□ -0.15
ERCC8-208ENST00000497892 MPHOSPH8Q99549 860 aa14.11□□□□□ -0.15
ERCC8-208ENST00000497892 MEIS3Q99687 375 aa14.11□□□□□ -0.15
ERCC8-208ENST00000497892 NMRK2Q9NPI5 230 aa14.11□□□□□ -0.15
ERCC8-208ENST00000497892 RCAN3Q9UKA8 241 aa14.11□□□□□ -0.15
ERCC8-208ENST00000497892 SCN4AP35499 1836 aa14.11□□□□□ -0.15
ERCC8-208ENST00000497892 C6orf229H3BNL8 230 aa14.1□□□□□ -0.15
ERCC8-208ENST00000497892 WASHC4Q2M389 1173 aa14.1□□□□□ -0.15
ERCC8-208ENST00000497892 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
ERCC8-208ENST00000497892 FTSJ3Q8IY81 847 aaKnown RBP14.1□□□□□ -0.15
ERCC8-208ENST00000497892 TMEM57Q8N5G2 664 aa14.1□□□□□ -0.15
ERCC8-208ENST00000497892 YTHDC1Q96MU7 727 aaKnown RBP14.1□□□□□ -0.15
ERCC8-208ENST00000497892 EYA3Q99504 573 aa14.1□□□□□ -0.15
ERCC8-208ENST00000497892 GGA1Q9UJY5 639 aa14.1□□□□□ -0.15
ERCC8-208ENST00000497892 PSME4Q14997 1843 aa14.1□□□□□ -0.15
ERCC8-208ENST00000497892 MED23Q9ULK4 1368 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 KIF3CO14782 793 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 ATP2B4P23634 1241 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 TAF7LQ5H9L4 462 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
ERCC8-208ENST00000497892 ZNF594Q96JF6 807 aaPredicted RBP14.09□□□□□ -0.15
ERCC8-208ENST00000497892 GPR101Q96P66 508 aaPredicted RBP14.09□□□□□ -0.15
ERCC8-208ENST00000497892 ANKRD2Q9GZV1 360 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 ZNRF3Q9ULT6 936 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 HDAC5Q9UQL6 1122 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 SCN9AQ15858 1988 aa14.09□□□□□ -0.15
ERCC8-208ENST00000497892 DDNO94850 711 aaPredicted RBP14.08□□□□□ -0.16
ERCC8-208ENST00000497892 GNAI3P08754 354 aa14.08□□□□□ -0.16
ERCC8-208ENST00000497892 RLBP1P12271 317 aa14.08□□□□□ -0.16
ERCC8-208ENST00000497892 EIF6P56537 245 aaKnown RBP14.08□□□□□ -0.16
ERCC8-208ENST00000497892 CHRNDQ07001 517 aa14.08□□□□□ -0.16
ERCC8-208ENST00000497892 LDHAL6AQ6ZMR3 332 aa14.08□□□□□ -0.16
ERCC8-208ENST00000497892 GPC2Q8N158 579 aa14.08□□□□□ -0.16
ERCC8-208ENST00000497892 LRRFIP2Q9Y608 721 aaKnown RBP14.08□□□□□ -0.16
ERCC8-208ENST00000497892 ZNF646O15015 1829 aaPredicted RBP14.07□□□□□ -0.16
ERCC8-208ENST00000497892 WTIPA6NIX2 430 aaPredicted RBP14.07□□□□□ -0.16
ERCC8-208ENST00000497892 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
ERCC8-208ENST00000497892 ZC3H12CQ9C0D7 883 aaKnown RBP14.07□□□□□ -0.16
ERCC8-208ENST00000497892 CNNM1Q9NRU3 951 aa14.07□□□□□ -0.16
ERCC8-208ENST00000497892 TAOK2Q9UL54 1235 aa14.07□□□□□ -0.16
ERCC8-208ENST00000497892 LEMD3Q9Y2U8 911 aa14.07□□□□□ -0.16
ERCC8-208ENST00000497892 YDJCA8MPS7 323 aa14.06□□□□□ -0.16
ERCC8-208ENST00000497892 POTECB2RU33 542 aa14.06□□□□□ -0.16
ERCC8-208ENST00000497892 VEGFAP15692 232 aaPredicted RBP14.06□□□□□ -0.16
ERCC8-208ENST00000497892 RFX5P48382 616 aaPredicted RBP14.06□□□□□ -0.16
ERCC8-208ENST00000497892 DBNDD1Q9H9R9 158 aa14.06□□□□□ -0.16
ERCC8-208ENST00000497892 RRAGCQ9HB90 399 aa14.06□□□□□ -0.16
ERCC8-208ENST00000497892 ZNF804BA4D1E1 1349 aa14.06□□□□□ -0.16
ERCC8-208ENST00000497892 ECE2O60344 883 aa14.05□□□□□ -0.16
ERCC8-208ENST00000497892 MS4A1P11836 297 aa14.05□□□□□ -0.16
ERCC8-208ENST00000497892 CXCL9Q07325 125 aa14.05□□□□□ -0.16
ERCC8-208ENST00000497892 MTX1Q13505 466 aa14.05□□□□□ -0.16
ERCC8-208ENST00000497892 ITPRIPQ8IWB1 547 aa14.05□□□□□ -0.16
ERCC8-208ENST00000497892 MS4A4AQ96JQ5 239 aa14.05□□□□□ -0.16
ERCC8-208ENST00000497892 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
ERCC8-208ENST00000497892 ADAMTSL1Q8N6G6 1762 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 IQCA1LA6NCM1 817 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 TAF5LO75529 589 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
ERCC8-208ENST00000497892 GNAI2P04899 355 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 DOK7Q18PE1 504 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 HELBQ8NG08 1087 aaPredicted RBP14.04□□□□□ -0.16
ERCC8-208ENST00000497892 KLHDC4Q8TBB5 520 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 PANK1Q8TE04 598 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 MARVELD3Q96A59 401 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 RIPOR2Q9Y4F9 1068 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 GJA3Q9Y6H8 435 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 MROH5Q6ZUA9 1318 aa14.04□□□□□ -0.16
ERCC8-208ENST00000497892 IRS2Q9Y4H2 1338 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms