RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	TLR7	Q9NYK1	1049 aa	Known RBP	18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	LEMD3	Q9Y2U8	911 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	FPGT-TNNI3K	V9GXZ4	949 aa		18.34	■□□□□ 0.53
UMPS-209	ENST00000497791	DICER1	Q9UPY3	1922 aa	Known RBP	18.34	■□□□□ 0.53
UMPS-209	ENST00000497791		A0A1B0GUL7	405 aa		18.33	■□□□□ 0.52
UMPS-209	ENST00000497791	KCNJ4	P48050	445 aa		18.33	■□□□□ 0.52
UMPS-209	ENST00000497791	AOC3	Q16853	763 aa		18.33	■□□□□ 0.52
UMPS-209	ENST00000497791	ANKRD45	Q5TZF3	282 aa		18.33	■□□□□ 0.52
UMPS-209	ENST00000497791	GCC1	Q96CN9	775 aa		18.33	■□□□□ 0.52
UMPS-209	ENST00000497791	TAOK3	Q9H2K8	898 aa		18.33	■□□□□ 0.52
UMPS-209	ENST00000497791	GTF3C3	Q9Y5Q9	886 aa		18.33	■□□□□ 0.52
UMPS-209	ENST00000497791	UBE4A	Q14139	1066 aa		18.32	■□□□□ 0.52
UMPS-209	ENST00000497791	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.32	■□□□□ 0.52
UMPS-209	ENST00000497791	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.32	■□□□□ 0.52
UMPS-209	ENST00000497791	SKAP1	Q86WV1	359 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	OTUD7A	Q8TE49	926 aa	Predicted RBP	18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	LPIN2	Q92539	896 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	MYH13	Q9UKX3	1938 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	GYG1	P46976	350 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	WASHC4	Q2M389	1173 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	NEUROD6	Q96NK8	337 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	DBNDD2	Q9BQY9	259 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	LNPK	Q9C0E8	428 aa		18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	DBNL	Q9UJU6	430 aa	Known RBP	18.31	■□□□□ 0.52
UMPS-209	ENST00000497791	LTBP3	Q9NS15	1303 aa		18.3	■□□□□ 0.52
UMPS-209	ENST00000497791	MED23	Q9ULK4	1368 aa		18.3	■□□□□ 0.52
UMPS-209	ENST00000497791	BCAM	P50895	628 aa		18.3	■□□□□ 0.52
UMPS-209	ENST00000497791	DOK7	Q18PE1	504 aa		18.3	■□□□□ 0.52
UMPS-209	ENST00000497791	AACS	Q86V21	672 aa		18.3	■□□□□ 0.52
UMPS-209	ENST00000497791	XAGE2	Q96GT9	111 aa		18.3	■□□□□ 0.52
UMPS-209	ENST00000497791	GPR108	Q9NPR9	543 aa		18.3	■□□□□ 0.52
UMPS-209	ENST00000497791	PPIP5K2	O43314	1243 aa		18.29	■□□□□ 0.52
UMPS-209	ENST00000497791	SLC5A1	P13866	664 aa		18.29	■□□□□ 0.52
UMPS-209	ENST00000497791	NUCB1	Q02818	461 aa		18.29	■□□□□ 0.52
UMPS-209	ENST00000497791	GRIPAP1	Q4V328	841 aa		18.29	■□□□□ 0.52
UMPS-209	ENST00000497791	FAM84B	Q96KN1	310 aa	Predicted RBP	18.29	■□□□□ 0.52
UMPS-209	ENST00000497791	AKAP11	Q9UKA4	1901 aa		18.29	■□□□□ 0.52
UMPS-209	ENST00000497791	ZNF646	O15015	1829 aa	Predicted RBP	18.29	■□□□□ 0.52
UMPS-209	ENST00000497791	IFIT1	P09914	478 aa	Known RBP	18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	IARS	P41252	1262 aa	Known RBP	18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	PHKA1	P46020	1223 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	KIAA2012	Q0VF49	1180 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	AKAP2	Q9Y2D5	859 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	TIAM2	Q8IVF5	1701 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	TSHZ3	Q63HK5	1081 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	C15orf52	Q6ZUT6	534 aa	Known RBP	18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	CLASRP	Q8N2M8	674 aa	Known RBP	18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	SUPT20H	Q8NEM7	779 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	DBNDD1	Q9H9R9	158 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	KCNQ5	Q9NR82	932 aa		18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.28	■□□□□ 0.52
UMPS-209	ENST00000497791	GRIN3B	O60391	1043 aa		18.27	■□□□□ 0.52
UMPS-209	ENST00000497791	CHD1L	Q86WJ1	897 aa		18.27	■□□□□ 0.52
UMPS-209	ENST00000497791	LARGE2	Q8N3Y3	721 aa		18.27	■□□□□ 0.52
UMPS-209	ENST00000497791	EYA3	Q99504	573 aa		18.27	■□□□□ 0.52
UMPS-209	ENST00000497791	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.27	■□□□□ 0.52
UMPS-209	ENST00000497791	MYO5A	Q9Y4I1	1855 aa	Known RBP	18.27	■□□□□ 0.51
UMPS-209	ENST00000497791	PSME4	Q14997	1843 aa		18.26	■□□□□ 0.51
UMPS-209	ENST00000497791	YDJC	A8MPS7	323 aa		18.26	■□□□□ 0.51
UMPS-209	ENST00000497791	PDE4A	P27815	886 aa		18.26	■□□□□ 0.51
UMPS-209	ENST00000497791	FBXO33	Q7Z6M2	555 aa		18.26	■□□□□ 0.51
UMPS-209	ENST00000497791	COL1A1	P02452	1464 aa	Predicted RBP	18.26	■□□□□ 0.51
UMPS-209	ENST00000497791	CCDC102B	Q68D86	513 aa		18.25	■□□□□ 0.51
UMPS-209	ENST00000497791	IFIT2	P09913	472 aa	Known RBP	18.25	■□□□□ 0.51
UMPS-209	ENST00000497791	LMNB1	P20700	586 aa		18.25	■□□□□ 0.51
UMPS-209	ENST00000497791	HIBADH	P31937	336 aa	Known RBP	18.25	■□□□□ 0.51
UMPS-209	ENST00000497791	SCARF1	Q14162	830 aa		18.25	■□□□□ 0.51
UMPS-209	ENST00000497791	SALL3	Q9BXA9	1300 aa		18.25	■□□□□ 0.51
UMPS-209	ENST00000497791	JAG2	Q9Y219	1238 aa		18.25	■□□□□ 0.51
UMPS-209	ENST00000497791	ECE2	O60344	883 aa		18.24	■□□□□ 0.51
UMPS-209	ENST00000497791	C9orf131	Q5VYM1	1079 aa		18.24	■□□□□ 0.51
UMPS-209	ENST00000497791	CD209	Q9NNX6	404 aa		18.24	■□□□□ 0.51
UMPS-209	ENST00000497791	RNF181	Q9P0P0	153 aa		18.24	■□□□□ 0.51
UMPS-209	ENST00000497791	PI16	Q6UXB8	463 aa		18.23	■□□□□ 0.51
UMPS-209	ENST00000497791	CAVIN4	Q5BKX8	364 aa		18.22	■□□□□ 0.51
UMPS-209	ENST00000497791	GORAB	Q5T7V8	394 aa		18.22	■□□□□ 0.51
UMPS-209	ENST00000497791	ZNF804A	Q7Z570	1209 aa		18.22	■□□□□ 0.51
UMPS-209	ENST00000497791	COA1	Q9GZY4	146 aa		18.22	■□□□□ 0.51
UMPS-209	ENST00000497791	NDUFB9	Q9Y6M9	179 aa		18.22	■□□□□ 0.51
UMPS-209	ENST00000497791	VPS37D	Q86XT2	251 aa		18.22	■□□□□ 0.51
UMPS-209	ENST00000497791	VPS33B	Q9H267	617 aa		18.22	■□□□□ 0.51
UMPS-209	ENST00000497791	IL1R1	P14778	569 aa		18.21	■□□□□ 0.51
UMPS-209	ENST00000497791	MCAM	P43121	646 aa		18.21	■□□□□ 0.51
UMPS-209	ENST00000497791	RASGRF1	Q13972	1273 aa		18.21	■□□□□ 0.51
UMPS-209	ENST00000497791	NIM1K	Q8IY84	436 aa		18.21	■□□□□ 0.51
UMPS-209	ENST00000497791	TDRD7	Q8NHU6	1098 aa	Known RBP	18.21	■□□□□ 0.51
UMPS-209	ENST00000497791	MXD3	Q9BW11	206 aa		18.21	■□□□□ 0.51
UMPS-209	ENST00000497791	ZBTB47	Q9UFB7	747 aa	Predicted RBP	18.21	■□□□□ 0.51
UMPS-209	ENST00000497791	ZNF541	Q9H0D2	1346 aa		18.2	■□□□□ 0.5
UMPS-209	ENST00000497791		G3V3G9	751 aa		18.2	■□□□□ 0.5
UMPS-209	ENST00000497791	ARID4A	P29374	1257 aa	Predicted RBP	18.2	■□□□□ 0.5
UMPS-209	ENST00000497791	TTC39A	Q5SRH9	613 aa		18.2	■□□□□ 0.5
UMPS-209	ENST00000497791	DCAF8	Q5TAQ9	597 aa		18.2	■□□□□ 0.5
UMPS-209	ENST00000497791	SNRK	Q9NRH2	765 aa		18.2	■□□□□ 0.5
UMPS-209	ENST00000497791	RAD17	O75943	681 aa		18.19	■□□□□ 0.5
UMPS-209	ENST00000497791	PLEKHM2	Q8IWE5	1019 aa		18.19	■□□□□ 0.5
UMPS-209	ENST00000497791	ZNRF3	Q9ULT6	936 aa		18.19	■□□□□ 0.5
UMPS-209	ENST00000497791	FZD9	O00144	591 aa		18.18	■□□□□ 0.5
UMPS-209	ENST00000497791	MX1	P20591	662 aa		18.18	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms