RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 BTAF1O14981 1849 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 GPR25O00155 361 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 TRAK2O60296 914 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 GDF11O95390 407 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 HSPA6P17066 643 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
VPS45-210ENST00000497638 MAP3K10Q02779 954 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 RASSF7Q02833 373 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 DBN1Q16643 649 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 NBPF10Q6P3W6 841 aaKnown RBP11.01□□□□□ -0.65
VPS45-210ENST00000497638 ARHGEF25Q86VW2 580 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 NBPF15Q8N660 670 aa11.01□□□□□ -0.65
VPS45-210ENST00000497638 GAS6Q14393 721 aa11□□□□□ -0.65
VPS45-210ENST00000497638 LYPD4Q6UWN0 246 aa11□□□□□ -0.65
VPS45-210ENST00000497638 KCTD17Q8N5Z5 321 aa11□□□□□ -0.65
VPS45-210ENST00000497638 KCNH5Q8NCM2 988 aa11□□□□□ -0.65
VPS45-210ENST00000497638 TBC1D2BQ9UPU7 963 aa11□□□□□ -0.65
VPS45-210ENST00000497638 KIAA1210Q9ULL0 1709 aa11□□□□□ -0.65
VPS45-210ENST00000497638 RGPD5Q99666 1765 aa11□□□□□ -0.65
VPS45-210ENST00000497638 KAT6BQ8WYB5 2073 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 GNRH1P01148 92 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 GSK3AP49840 483 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 TAS1R3Q7RTX0 852 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 NLGN2Q8NFZ4 835 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 TIMMDC1Q9NPL8 285 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 MBIPQ9NS73 344 aa10.99□□□□□ -0.65
VPS45-210ENST00000497638 SPATA31C2B4DYI2 1134 aa10.98□□□□□ -0.65
VPS45-210ENST00000497638 YBX3P16989 372 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS45-210ENST00000497638 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
VPS45-210ENST00000497638 CNKSR1Q969H4 720 aa10.98□□□□□ -0.65
VPS45-210ENST00000497638 GTPBP3Q969Y2 492 aaKnown RBP10.98□□□□□ -0.65
VPS45-210ENST00000497638 ACSBG1Q96GR2 724 aa10.98□□□□□ -0.65
VPS45-210ENST00000497638 TRERF1Q96PN7 1200 aa10.98□□□□□ -0.65
VPS45-210ENST00000497638 LRRC4BQ9NT99 713 aa10.98□□□□□ -0.65
VPS45-210ENST00000497638 PNPLA7Q6ZV29 1317 aa10.98□□□□□ -0.65
VPS45-210ENST00000497638 CCDC85AQ96PX6 553 aaPredicted RBP10.97□□□□□ -0.65
VPS45-210ENST00000497638 ESYT1Q9BSJ8 1104 aa10.97□□□□□ -0.65
VPS45-210ENST00000497638 ENAMQ9NRM1 1142 aa10.97□□□□□ -0.65
VPS45-210ENST00000497638 CENPJQ9HC77 1338 aaPredicted RBP10.97□□□□□ -0.65
VPS45-210ENST00000497638 ADCY9O60503 1353 aa10.97□□□□□ -0.65
VPS45-210ENST00000497638 NFAT5O94916 1531 aa10.97□□□□□ -0.65
VPS45-210ENST00000497638 TUBGCP6Q96RT7 1819 aa10.96□□□□□ -0.65
VPS45-210ENST00000497638 CELA2BP08218 269 aaPredicted RBP10.96□□□□□ -0.65
VPS45-210ENST00000497638 GTF2E1P29083 439 aaPredicted RBP10.96□□□□□ -0.65
VPS45-210ENST00000497638 IRS1P35568 1242 aa10.96□□□□□ -0.65
VPS45-210ENST00000497638 CENPCQ03188 943 aa10.96□□□□□ -0.65
VPS45-210ENST00000497638 WDR44Q5JSH3 913 aa10.96□□□□□ -0.65
VPS45-210ENST00000497638 CABP1Q9NZU7 370 aa10.96□□□□□ -0.65
VPS45-210ENST00000497638 IL2RBP14784 551 aa10.95□□□□□ -0.66
VPS45-210ENST00000497638 SCARF2Q96GP6 870 aaPredicted RBP10.95□□□□□ -0.66
VPS45-210ENST00000497638 TFCP2L1Q9NZI6 479 aa10.95□□□□□ -0.66
VPS45-210ENST00000497638 TTC21AQ8NDW8 1320 aa10.94□□□□□ -0.66
VPS45-210ENST00000497638 IL2RAP01589 272 aa10.94□□□□□ -0.66
VPS45-210ENST00000497638 F11P03951 625 aa10.94□□□□□ -0.66
VPS45-210ENST00000497638 PHKA2P46019 1235 aa10.94□□□□□ -0.66
VPS45-210ENST00000497638 SLFNL1Q499Z3 407 aa10.94□□□□□ -0.66
VPS45-210ENST00000497638 ZSCAN10Q96SZ4 725 aaPredicted RBP10.94□□□□□ -0.66
VPS45-210ENST00000497638 NUCKS1Q9H1E3 243 aaKnown RBP10.94□□□□□ -0.66
VPS45-210ENST00000497638 RAB3GAP2Q9H2M9 1393 aa10.93□□□□□ -0.66
VPS45-210ENST00000497638 TTC21BQ7Z4L5 1316 aa10.93□□□□□ -0.66
VPS45-210ENST00000497638 USP4Q13107 963 aa10.93□□□□□ -0.66
VPS45-210ENST00000497638 DOLKQ9UPQ8 538 aa10.93□□□□□ -0.66
VPS45-210ENST00000497638 TMEM214Q6NUQ4 689 aaKnown RBP10.92□□□□□ -0.66
VPS45-210ENST00000497638 NLRP2Q9NX02 1062 aa10.92□□□□□ -0.66
VPS45-210ENST00000497638 MX2P20592 715 aa10.91□□□□□ -0.66
VPS45-210ENST00000497638 TSGA10IPQ3SY00 556 aa10.91□□□□□ -0.66
VPS45-210ENST00000497638 GNASQ5JWF2 1037 aa10.91□□□□□ -0.66
VPS45-210ENST00000497638 RNF135Q8IUD6 432 aa10.91□□□□□ -0.66
VPS45-210ENST00000497638 XAGE2Q96GT9 111 aa10.91□□□□□ -0.66
VPS45-210ENST00000497638 GPAMQ9HCL2 828 aa10.91□□□□□ -0.66
VPS45-210ENST00000497638 NSFL1CQ9UNZ2 370 aaKnown RBP10.91□□□□□ -0.66
VPS45-210ENST00000497638 CD2APQ9Y5K6 639 aa10.91□□□□□ -0.66
VPS45-210ENST00000497638 EVC2Q86UK5 1308 aa10.9□□□□□ -0.66
VPS45-210ENST00000497638 LY75O60449 1722 aa10.9□□□□□ -0.66
VPS45-210ENST00000497638 VAC14Q08AM6 782 aa10.9□□□□□ -0.66
VPS45-210ENST00000497638 IRF5Q13568 498 aa10.9□□□□□ -0.66
VPS45-210ENST00000497638 NBPF1Q3BBV0 1214 aa10.9□□□□□ -0.66
VPS45-210ENST00000497638 KANK3Q6NY19 840 aa10.9□□□□□ -0.66
VPS45-210ENST00000497638 NEDD1Q8NHV4 660 aa10.9□□□□□ -0.66
VPS45-210ENST00000497638 ZNF526Q8TF50 670 aaPredicted RBP10.9□□□□□ -0.66
VPS45-210ENST00000497638 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
VPS45-210ENST00000497638 OXLD1Q5BKU9 147 aa10.89□□□□□ -0.67
VPS45-210ENST00000497638 ANKRD36BQ8N2N9 1353 aa10.89□□□□□ -0.67
VPS45-210ENST00000497638 A0A1B0GTH6 734 aa10.88□□□□□ -0.67
VPS45-210ENST00000497638 BCRP11274 1271 aa10.88□□□□□ -0.67
VPS45-210ENST00000497638 ABL2P42684 1182 aa10.88□□□□□ -0.67
VPS45-210ENST00000497638 PHTF2Q8N3S3 785 aa10.88□□□□□ -0.67
VPS45-210ENST00000497638 GDPD2Q9HCC8 539 aa10.88□□□□□ -0.67
VPS45-210ENST00000497638 USP31Q70CQ4 1352 aa10.88□□□□□ -0.67
VPS45-210ENST00000497638 LTN1O94822 1766 aa10.88□□□□□ -0.67
VPS45-210ENST00000497638 HMGB2P26583 209 aaKnown RBP10.87□□□□□ -0.67
VPS45-210ENST00000497638 COL23A1Q86Y22 540 aaPredicted RBP10.87□□□□□ -0.67
VPS45-210ENST00000497638 ANKRD24Q8TF21 1146 aa10.87□□□□□ -0.67
VPS45-210ENST00000497638 CCNL1Q9UK58 526 aaPredicted RBP10.87□□□□□ -0.67
VPS45-210ENST00000497638 HRH3Q9Y5N1 445 aa10.87□□□□□ -0.67
VPS45-210ENST00000497638 KTN1Q86UP2 1357 aaKnown RBP10.87□□□□□ -0.67
VPS45-210ENST00000497638 MON2Q7Z3U7 1717 aa10.87□□□□□ -0.67
VPS45-210ENST00000497638 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms