RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 IPO9Q96P70 1041 aaKnown RBP14.72□□□□□ -0.05
HPS1-213ENST00000497527 USP26Q9BXU7 913 aa14.72□□□□□ -0.05
HPS1-213ENST00000497527 COL4A1P02462 1669 aa14.71□□□□□ -0.05
HPS1-213ENST00000497527 TAF5LO75529 589 aa14.71□□□□□ -0.05
HPS1-213ENST00000497527 ZFYP08048 801 aaPredicted RBP14.71□□□□□ -0.05
HPS1-213ENST00000497527 BECN1Q14457 450 aa14.71□□□□□ -0.05
HPS1-213ENST00000497527 CAVIN4Q5BKX8 364 aa14.71□□□□□ -0.05
HPS1-213ENST00000497527 CCDC102BQ68D86 513 aa14.71□□□□□ -0.05
HPS1-213ENST00000497527 ZSCAN25Q6NSZ9 544 aa14.71□□□□□ -0.05
HPS1-213ENST00000497527 CWC27Q6UX04 472 aaKnown RBP14.71□□□□□ -0.05
HPS1-213ENST00000497527 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.71□□□□□ -0.05
HPS1-213ENST00000497527 ANO2Q9NQ90 1003 aa14.71□□□□□ -0.05
HPS1-213ENST00000497527 DAXXQ9UER7 740 aaPredicted RBP14.71□□□□□ -0.05
HPS1-213ENST00000497527 GOLIM4O00461 696 aa14.7□□□□□ -0.06
HPS1-213ENST00000497527 NPR1P16066 1061 aa14.7□□□□□ -0.06
HPS1-213ENST00000497527 ALDH1B1P30837 517 aa14.7□□□□□ -0.06
HPS1-213ENST00000497527 LEMD3Q9Y2U8 911 aa14.7□□□□□ -0.06
HPS1-213ENST00000497527 COL11A2P13942 1736 aaPredicted RBP14.69□□□□□ -0.06
HPS1-213ENST00000497527 XDHP47989 1333 aa14.69□□□□□ -0.06
HPS1-213ENST00000497527 SEMA3EO15041 775 aa14.69□□□□□ -0.06
HPS1-213ENST00000497527 ZBTB22O15209 634 aa14.69□□□□□ -0.06
HPS1-213ENST00000497527 FKBP4Q02790 459 aaKnown RBP eCLIP14.69□□□□□ -0.06
HPS1-213ENST00000497527 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
HPS1-213ENST00000497527 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
HPS1-213ENST00000497527 HELLSQ9NRZ9 838 aa14.69□□□□□ -0.06
HPS1-213ENST00000497527 CACNA1SQ13698 1873 aa14.69□□□□□ -0.06
HPS1-213ENST00000497527 CCDC88AQ3V6T2 1871 aa14.68□□□□□ -0.06
HPS1-213ENST00000497527 PHKA1P46020 1223 aa14.68□□□□□ -0.06
HPS1-213ENST00000497527 ANAPC15P60006 121 aa14.68□□□□□ -0.06
HPS1-213ENST00000497527 NMIQ13287 307 aaPredicted RBP14.68□□□□□ -0.06
HPS1-213ENST00000497527 VPS37DQ86XT2 251 aa14.68□□□□□ -0.06
HPS1-213ENST00000497527 MASTLQ96GX5 879 aa14.68□□□□□ -0.06
HPS1-213ENST00000497527 ZNF804BA4D1E1 1349 aa14.67□□□□□ -0.06
HPS1-213ENST00000497527 MYO5AQ9Y4I1 1855 aaKnown RBP14.67□□□□□ -0.06
HPS1-213ENST00000497527 IGSF3O75054 1194 aa14.67□□□□□ -0.06
HPS1-213ENST00000497527 ATP2B4P23634 1241 aa14.67□□□□□ -0.06
HPS1-213ENST00000497527 MCAMP43121 646 aa14.67□□□□□ -0.06
HPS1-213ENST00000497527 MSL1Q68DK7 614 aa14.67□□□□□ -0.06
HPS1-213ENST00000497527 ANKIB1Q9P2G1 1089 aa14.67□□□□□ -0.06
HPS1-213ENST00000497527 DLEC1Q9Y238 1755 aa14.67□□□□□ -0.06
HPS1-213ENST00000497527 PDS5AQ29RF7 1337 aaKnown RBP14.66□□□□□ -0.06
HPS1-213ENST00000497527 DUOX1Q9NRD9 1551 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 MED23Q9ULK4 1368 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 H0YIN7 160 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 RNF113AO15541 343 aaKnown RBP14.66□□□□□ -0.06
HPS1-213ENST00000497527 SRGNP10124 158 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 ZAP70P43403 619 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 RABEP1Q15276 862 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 MCMDC2Q4G0Z9 681 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 SP8Q8IXZ3 490 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 SPATA5Q8NB90 893 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
HPS1-213ENST00000497527 DENND2AQ9ULE3 1009 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 CCDC171Q6TFL3 1326 aa14.66□□□□□ -0.06
HPS1-213ENST00000497527 A0A0D9SFI3 127 aa14.65□□□□□ -0.06
HPS1-213ENST00000497527 PPEF1O14829 653 aaPredicted RBP14.65□□□□□ -0.06
HPS1-213ENST00000497527 ZMYM1Q5SVZ6 1142 aa14.65□□□□□ -0.06
HPS1-213ENST00000497527 STYK1Q6J9G0 422 aa14.65□□□□□ -0.06
HPS1-213ENST00000497527 C15orf52Q6ZUT6 534 aaKnown RBP14.65□□□□□ -0.06
HPS1-213ENST00000497527 LSG1Q9H089 658 aaKnown RBP14.65□□□□□ -0.06
HPS1-213ENST00000497527 PODXL2Q9NZ53 605 aa14.65□□□□□ -0.06
HPS1-213ENST00000497527 HMG20BQ9P0W2 317 aa14.65□□□□□ -0.06
HPS1-213ENST00000497527 MAST2Q6P0Q8 1798 aa14.65□□□□□ -0.06
HPS1-213ENST00000497527 KIF13BQ9NQT8 1826 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 LTBP1Q14766 1721 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 HIBADHP31937 336 aaKnown RBP14.64□□□□□ -0.07
HPS1-213ENST00000497527 BCAMP50895 628 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 MAP3K12Q12852 859 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 SCARF1Q14162 830 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 WASHC4Q2M389 1173 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 RNF20Q5VTR2 975 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 TMED8Q6PL24 325 aaPredicted RBP14.64□□□□□ -0.07
HPS1-213ENST00000497527 FBXO33Q7Z6M2 555 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 FAM227BQ96M60 508 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 GGA1Q9UJY5 639 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 ATP6V0A2Q9Y487 856 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 NDUFB9Q9Y6M9 179 aa14.64□□□□□ -0.07
HPS1-213ENST00000497527 CYP2E1P05181 493 aaPredicted RBP14.63□□□□□ -0.07
HPS1-213ENST00000497527 HSPA4P34932 840 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 RASGRF1Q13972 1273 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 UBE3CQ15386 1083 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 C2CD5Q86YS7 1000 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 HSCBQ8IWL3 235 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 APPBP2Q92624 585 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 CNKSR1Q969H4 720 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 SNX21Q969T3 373 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 IL17RAQ96F46 866 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 FAM84BQ96KN1 310 aaPredicted RBP14.63□□□□□ -0.07
HPS1-213ENST00000497527 ANTXR1Q9H6X2 564 aa14.63□□□□□ -0.07
HPS1-213ENST00000497527 SNAP23O00161 211 aa14.62□□□□□ -0.07
HPS1-213ENST00000497527 ST18O60284 1047 aa14.62□□□□□ -0.07
HPS1-213ENST00000497527 FRAT2O75474 233 aaPredicted RBP14.62□□□□□ -0.07
HPS1-213ENST00000497527 GYG1P46976 350 aa14.62□□□□□ -0.07
HPS1-213ENST00000497527 C10orf71Q711Q0 1435 aa14.62□□□□□ -0.07
HPS1-213ENST00000497527 ZGPATQ8N5A5 531 aaKnown RBP14.62□□□□□ -0.07
HPS1-213ENST00000497527 MAP4K1Q92918 833 aa14.62□□□□□ -0.07
HPS1-213ENST00000497527 KIAA1551Q9HCM1 1747 aa14.62□□□□□ -0.07
HPS1-213ENST00000497527 NSFL1CQ9UNZ2 370 aaKnown RBP14.62□□□□□ -0.07
HPS1-213ENST00000497527 IDH1O75874 414 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms