RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 NOP58Q9Y2X3 529 aaKnown RBP20.12■□□□□ 0.81
FAM3A-220ENST00000497506 KDM2BQ8NHM5 1336 aa20.11■□□□□ 0.81
FAM3A-220ENST00000497506 G3BP1Q13283 466 aaKnown RBP eCLIP20.11■□□□□ 0.81
FAM3A-220ENST00000497506 PUM3Q15397 648 aaKnown RBP20.11■□□□□ 0.81
FAM3A-220ENST00000497506 COA1Q9GZY4 146 aa20.11■□□□□ 0.81
FAM3A-220ENST00000497506 PSME4Q14997 1843 aa20.11■□□□□ 0.81
FAM3A-220ENST00000497506 WDR90Q96KV7 1748 aa20.1■□□□□ 0.81
FAM3A-220ENST00000497506 G3V3G9 751 aa20.1■□□□□ 0.81
FAM3A-220ENST00000497506 SURF6O75683 361 aaKnown RBP20.1■□□□□ 0.81
FAM3A-220ENST00000497506 RAD17O75943 681 aa20.1■□□□□ 0.81
FAM3A-220ENST00000497506 TFCP2Q12800 502 aa20.1■□□□□ 0.81
FAM3A-220ENST00000497506 DCAF8Q5TAQ9 597 aa20.1■□□□□ 0.81
FAM3A-220ENST00000497506 PODNQ7Z5L7 613 aa20.1■□□□□ 0.81
FAM3A-220ENST00000497506 GPC2Q8N158 579 aa20.1■□□□□ 0.81
FAM3A-220ENST00000497506 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.1■□□□□ 0.81
FAM3A-220ENST00000497506 ZNF646O15015 1829 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-220ENST00000497506 SASH1O94885 1247 aa20.09■□□□□ 0.81
FAM3A-220ENST00000497506 CIAPIN1Q6FI81 312 aa20.09■□□□□ 0.81
FAM3A-220ENST00000497506 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-220ENST00000497506 GJA3Q9Y6H8 435 aa20.09■□□□□ 0.81
FAM3A-220ENST00000497506 POTECB2RU33 542 aa20.08■□□□□ 0.81
FAM3A-220ENST00000497506 HMMRO75330 724 aa20.08■□□□□ 0.81
FAM3A-220ENST00000497506 LPIN2Q92539 896 aa20.08■□□□□ 0.81
FAM3A-220ENST00000497506 L3MBTL3Q96JM7 780 aaPredicted RBP20.08■□□□□ 0.81
FAM3A-220ENST00000497506 FAM84BQ96KN1 310 aaPredicted RBP20.08■□□□□ 0.81
FAM3A-220ENST00000497506 CD209Q9NNX6 404 aa20.08■□□□□ 0.81
FAM3A-220ENST00000497506 NMRK2Q9NPI5 230 aa20.08■□□□□ 0.81
FAM3A-220ENST00000497506 PCDHB15Q9Y5E8 787 aa20.08■□□□□ 0.81
FAM3A-220ENST00000497506 PSMD14O00487 310 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 IFIT1P09914 478 aaKnown RBP20.07■□□□□ 0.8
FAM3A-220ENST00000497506 GYG1P46976 350 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 TNIP1Q15025 636 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 ZNF804AQ7Z570 1209 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 FBXO33Q7Z6M2 555 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 RRAGCQ9HB90 399 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 ARAP2Q8WZ64 1704 aa20.07■□□□□ 0.8
FAM3A-220ENST00000497506 SLC5A1P13866 664 aa20.06■□□□□ 0.8
FAM3A-220ENST00000497506 IL1R1P14778 569 aa20.06■□□□□ 0.8
FAM3A-220ENST00000497506 HIBADHP31937 336 aaKnown RBP20.06■□□□□ 0.8
FAM3A-220ENST00000497506 EXOC6Q8TAG9 804 aa20.06■□□□□ 0.8
FAM3A-220ENST00000497506 EXOC6BQ9Y2D4 811 aa20.06■□□□□ 0.8
FAM3A-220ENST00000497506 SCN4AP35499 1836 aa20.06■□□□□ 0.8
FAM3A-220ENST00000497506 VIL1P09327 827 aaKnown RBP20.05■□□□□ 0.8
FAM3A-220ENST00000497506 OS9Q13438 667 aaPredicted RBP20.05■□□□□ 0.8
FAM3A-220ENST00000497506 BCAMP50895 628 aa20.04■□□□□ 0.8
FAM3A-220ENST00000497506 TIMM10P62072 90 aa20.04■□□□□ 0.8
FAM3A-220ENST00000497506 AAMPQ13685 434 aa20.04■□□□□ 0.8
FAM3A-220ENST00000497506 TDRD7Q8NHU6 1098 aaKnown RBP20.04■□□□□ 0.8
FAM3A-220ENST00000497506 AKAP2Q9Y2D5 859 aa20.04■□□□□ 0.8
FAM3A-220ENST00000497506 A0A1B0GUL7 405 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 USP17L3A6NCW0 530 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 USP17L4A6NCW7 530 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 KIF3CO14782 793 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 VEGFAP15692 232 aaPredicted RBP20.03■□□□□ 0.8
FAM3A-220ENST00000497506 GMPSP49915 693 aaPredicted RBP20.03■□□□□ 0.8
FAM3A-220ENST00000497506 SCNN1DP51172 638 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 IRX6P78412 446 aaPredicted RBP20.03■□□□□ 0.8
FAM3A-220ENST00000497506 CAVIN4Q5BKX8 364 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 USP17L1Q7RTZ2 530 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 GPR108Q9NPR9 543 aa20.03■□□□□ 0.8
FAM3A-220ENST00000497506 ZBTB12Q9Y330 459 aaPredicted RBP20.03■□□□□ 0.8
FAM3A-220ENST00000497506 ZNF609O15014 1411 aa20.02■□□□□ 0.8
FAM3A-220ENST00000497506 ADORA1P30542 326 aa20.02■□□□□ 0.8
FAM3A-220ENST00000497506 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
FAM3A-220ENST00000497506 DACT2Q5SW24 774 aa20.02■□□□□ 0.8
FAM3A-220ENST00000497506 STRIP1Q5VSL9 837 aa20.02■□□□□ 0.8
FAM3A-220ENST00000497506 GTF2IP78347 998 aa20.01■□□□□ 0.79
FAM3A-220ENST00000497506 TTLL5Q6EMB2 1281 aa20.01■□□□□ 0.79
FAM3A-220ENST00000497506 RSBN1LQ6PCB5 846 aaPredicted RBP20.01■□□□□ 0.79
FAM3A-220ENST00000497506 VPS37DQ86XT2 251 aa20.01■□□□□ 0.79
FAM3A-220ENST00000497506 ERC1Q8IUD2 1116 aa20.01■□□□□ 0.79
FAM3A-220ENST00000497506 GPRC5DQ9NZD1 345 aa20.01■□□□□ 0.79
FAM3A-220ENST00000497506 IQCA1LA6NCM1 817 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 RPS12P25398 132 aaKnown RBP20■□□□□ 0.79
FAM3A-220ENST00000497506 EPS15P42566 896 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 TNNI3KQ59H18 835 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 RHPN1Q8TCX5 695 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 DPF2Q92785 391 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 XAGE2Q96GT9 111 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 NEUROD6Q96NK8 337 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 GMLQ99445 158 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 MXD3Q9BW11 206 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 HACL1Q9UJ83 578 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 IQSEC3Q9UPP2 1182 aaPredicted RBP20■□□□□ 0.79
FAM3A-220ENST00000497506 FPGT-TNNI3KV9GXZ4 949 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 FAM205AQ6ZU69 1335 aa20■□□□□ 0.79
FAM3A-220ENST00000497506 RAB11FIP3O75154 756 aa19.99■□□□□ 0.79
FAM3A-220ENST00000497506 PHKA1P46020 1223 aa19.99■□□□□ 0.79
FAM3A-220ENST00000497506 AGBL3Q8NEM8 1001 aa19.99■□□□□ 0.79
FAM3A-220ENST00000497506 FBXW7Q969H0 707 aa19.99■□□□□ 0.79
FAM3A-220ENST00000497506 TAF1DQ9H5J8 278 aaPredicted RBP19.99■□□□□ 0.79
FAM3A-220ENST00000497506 DCTPP1Q9H773 170 aa19.99■□□□□ 0.79
FAM3A-220ENST00000497506 MYH13Q9UKX3 1938 aa19.99■□□□□ 0.79
FAM3A-220ENST00000497506 SHTN1A0MZ66 631 aa19.98■□□□□ 0.79
FAM3A-220ENST00000497506 LMOD1P29536 600 aaPredicted RBP19.98■□□□□ 0.79
FAM3A-220ENST00000497506 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
FAM3A-220ENST00000497506 EAF2Q96CJ1 260 aaPredicted RBP19.98■□□□□ 0.79
FAM3A-220ENST00000497506 KIF1BPQ96EK5 621 aa19.98■□□□□ 0.79
FAM3A-220ENST00000497506 CNOT7Q9UIV1 285 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms