RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 GRIN3BO60391 1043 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 IGSF3O75054 1194 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 CAVIN4Q5BKX8 364 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 FBXO33Q7Z6M2 555 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 AACSQ86V21 672 aa24.22■■□□□ 1.47
SCAMP3-209ENST00000497470 SEMA3EO15041 775 aa24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 TIMM10P62072 90 aa24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 KIAA2012Q0VF49 1180 aa24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 XAGE2Q96GT9 111 aa24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 GPATCH3Q96I76 525 aa24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 ZC3H12CQ9C0D7 883 aaKnown RBP24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 TAOK3Q9H2K8 898 aa24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.21■■□□□ 1.47
SCAMP3-209ENST00000497470 PDS5AQ29RF7 1337 aaKnown RBP24.2■■□□□ 1.46
SCAMP3-209ENST00000497470 C6orf229H3BNL8 230 aa24.2■■□□□ 1.46
SCAMP3-209ENST00000497470 WASHC4Q2M389 1173 aa24.2■■□□□ 1.46
SCAMP3-209ENST00000497470 COA1Q9GZY4 146 aa24.2■■□□□ 1.46
SCAMP3-209ENST00000497470 DBNLQ9UJU6 430 aaKnown RBP24.2■■□□□ 1.46
SCAMP3-209ENST00000497470 UQCRFS1P1P0C7P4 283 aa24.19■■□□□ 1.46
SCAMP3-209ENST00000497470 CCDC158Q5M9N0 1113 aa24.19■■□□□ 1.46
SCAMP3-209ENST00000497470 ZNF804AQ7Z570 1209 aa24.19■■□□□ 1.46
SCAMP3-209ENST00000497470 FAM84BQ96KN1 310 aaPredicted RBP24.19■■□□□ 1.46
SCAMP3-209ENST00000497470 LNPKQ9C0E8 428 aa24.19■■□□□ 1.46
SCAMP3-209ENST00000497470 GNL3LQ9NVN8 582 aaKnown RBP24.19■■□□□ 1.46
SCAMP3-209ENST00000497470 APBB1O00213 710 aa24.18■■□□□ 1.46
SCAMP3-209ENST00000497470 NFKBIEO00221 500 aa24.18■■□□□ 1.46
SCAMP3-209ENST00000497470 SMARCA5O60264 1052 aaPredicted RBP24.18■■□□□ 1.46
SCAMP3-209ENST00000497470 OLFM4Q6UX06 510 aa24.18■■□□□ 1.46
SCAMP3-209ENST00000497470 PODNQ7Z5L7 613 aa24.18■■□□□ 1.46
SCAMP3-209ENST00000497470 TICAM2Q86XR7 235 aa24.18■■□□□ 1.46
SCAMP3-209ENST00000497470 NEUROD6Q96NK8 337 aa24.18■■□□□ 1.46
SCAMP3-209ENST00000497470 ERC2O15083 957 aa24.17■■□□□ 1.46
SCAMP3-209ENST00000497470 IL1R1P14778 569 aa24.17■■□□□ 1.46
SCAMP3-209ENST00000497470 ATP5JP18859 108 aa24.17■■□□□ 1.46
SCAMP3-209ENST00000497470 ARID4AP29374 1257 aaPredicted RBP24.17■■□□□ 1.46
SCAMP3-209ENST00000497470 HIBADHP31937 336 aaKnown RBP24.17■■□□□ 1.46
SCAMP3-209ENST00000497470 DBNDD2Q9BQY9 259 aa24.17■■□□□ 1.46
SCAMP3-209ENST00000497470 ECHDC1Q9NTX5 307 aa24.17■■□□□ 1.46
SCAMP3-209ENST00000497470 MX1P20591 662 aa24.16■■□□□ 1.46
SCAMP3-209ENST00000497470 GORABQ5T7V8 394 aa24.16■■□□□ 1.46
SCAMP3-209ENST00000497470 CCDC102BQ68D86 513 aa24.16■■□□□ 1.46
SCAMP3-209ENST00000497470 YBX3P16989 372 aaKnown RBP eCLIP24.15■■□□□ 1.467e-7■■■■□ 21.8
SCAMP3-209ENST00000497470 PDE1AP54750 535 aa24.15■■□□□ 1.46
SCAMP3-209ENST00000497470 PLEKHM2Q8IWE5 1019 aa24.15■■□□□ 1.46
SCAMP3-209ENST00000497470 TDRD7Q8NHU6 1098 aaKnown RBP24.15■■□□□ 1.46
SCAMP3-209ENST00000497470 CCDC8Q9H0W5 538 aaPredicted RBP24.15■■□□□ 1.46
SCAMP3-209ENST00000497470 GLRX3O76003 335 aaKnown RBP24.14■■□□□ 1.45
SCAMP3-209ENST00000497470 IARSP41252 1262 aaKnown RBP24.14■■□□□ 1.45
SCAMP3-209ENST00000497470 ZNF219Q9P2Y4 722 aaPredicted RBP24.14■■□□□ 1.45
SCAMP3-209ENST00000497470 SNAP23O00161 211 aa24.13■■□□□ 1.45
SCAMP3-209ENST00000497470 TXNRD3Q86VQ6 643 aa24.13■■□□□ 1.45
SCAMP3-209ENST00000497470 VPS37DQ86XT2 251 aa24.13■■□□□ 1.45
SCAMP3-209ENST00000497470 CD209Q9NNX6 404 aa24.13■■□□□ 1.45
SCAMP3-209ENST00000497470 WTIPA6NIX2 430 aaPredicted RBP24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 LMNB1P20700 586 aa24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 PDE4AP27815 886 aa24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 ADORA1P30542 326 aa24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 GPR162Q16538 588 aa24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 TMED8Q6PL24 325 aaPredicted RBP24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 SLC51AQ86UW1 340 aa24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 C16orf71Q8IYS4 520 aaPredicted RBP24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 DENND2AQ9ULE3 1009 aa24.12■■□□□ 1.45
SCAMP3-209ENST00000497470 PPIP5K2O43314 1243 aa24.11■■□□□ 1.45
SCAMP3-209ENST00000497470 BCAMP50895 628 aa24.11■■□□□ 1.45
SCAMP3-209ENST00000497470 ARHGAP27Q6ZUM4 889 aa24.11■■□□□ 1.45
SCAMP3-209ENST00000497470 TLR7Q9NYK1 1049 aaKnown RBP24.11■■□□□ 1.45
SCAMP3-209ENST00000497470 FAM205AQ6ZU69 1335 aa24.1■■□□□ 1.45
SCAMP3-209ENST00000497470 ZC3H4Q9UPT8 1303 aaKnown RBP24.1■■□□□ 1.45
SCAMP3-209ENST00000497470 PHKA1P46020 1223 aa24.1■■□□□ 1.45
SCAMP3-209ENST00000497470 GYG1P46976 350 aa24.1■■□□□ 1.45
SCAMP3-209ENST00000497470 FKBP1AP62942 108 aaKnown RBP24.1■■□□□ 1.45
SCAMP3-209ENST00000497470 TTC39AQ5SRH9 613 aa24.1■■□□□ 1.45
SCAMP3-209ENST00000497470 PI4K2BQ8TCG2 481 aa24.1■■□□□ 1.45
SCAMP3-209ENST00000497470 DCAF8L1A6NGE4 600 aa24.09■■□□□ 1.45
SCAMP3-209ENST00000497470 KLRK1P26718 216 aa24.09■■□□□ 1.45
SCAMP3-209ENST00000497470 LARGE2Q8N3Y3 721 aa24.09■■□□□ 1.45
SCAMP3-209ENST00000497470 JDP2Q8WYK2 163 aa24.09■■□□□ 1.45
SCAMP3-209ENST00000497470 SALL1Q9NSC2 1324 aa24.09■■□□□ 1.45
SCAMP3-209ENST00000497470 MMP14P50281 582 aa24.08■■□□□ 1.45
SCAMP3-209ENST00000497470 AOC3Q16853 763 aa24.08■■□□□ 1.45
SCAMP3-209ENST00000497470 TBC1D22AQ8WUA7 517 aa24.08■■□□□ 1.45
SCAMP3-209ENST00000497470 HAUS7Q99871 368 aa24.08■■□□□ 1.45
SCAMP3-209ENST00000497470 ZNF277Q9NRM2 450 aaPredicted RBP24.08■■□□□ 1.45
SCAMP3-209ENST00000497470 ZNRF3Q9ULT6 936 aa24.08■■□□□ 1.45
SCAMP3-209ENST00000497470 SUGT1Q9Y2Z0 365 aa24.08■■□□□ 1.45
SCAMP3-209ENST00000497470 G3V3G9 751 aa24.07■■□□□ 1.44
SCAMP3-209ENST00000497470 DCAF8Q5TAQ9 597 aa24.07■■□□□ 1.44
SCAMP3-209ENST00000497470 NIM1KQ8IY84 436 aa24.07■■□□□ 1.44
SCAMP3-209ENST00000497470 ZGPATQ8N5A5 531 aaKnown RBP24.07■■□□□ 1.44
SCAMP3-209ENST00000497470 WDR66Q8TBY9 1149 aa24.07■■□□□ 1.44
SCAMP3-209ENST00000497470 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
SCAMP3-209ENST00000497470 RIMBP2O15034 1052 aa24.06■■□□□ 1.44
SCAMP3-209ENST00000497470 TTF1Q15361 905 aaPredicted RBP24.06■■□□□ 1.44
SCAMP3-209ENST00000497470 STRIP1Q5VSL9 837 aa24.06■■□□□ 1.44
SCAMP3-209ENST00000497470 FZD9O00144 591 aa24.05■■□□□ 1.44
SCAMP3-209ENST00000497470 ECE2O60344 883 aa24.05■■□□□ 1.44
SCAMP3-209ENST00000497470 MCAMP43121 646 aa24.05■■□□□ 1.44
SCAMP3-209ENST00000497470 RASGRF1Q13972 1273 aa24.05■■□□□ 1.44
SCAMP3-209ENST00000497470 SPATA5Q8NB90 893 aa24.05■■□□□ 1.44
SCAMP3-209ENST00000497470 HMG20BQ9P0W2 317 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms