RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 SASH1O94885 1247 aa19.08■□□□□ 0.64
RNF220-218ENST00000497469 ZMYND8Q9ULU4 1186 aaPredicted RBP19.08■□□□□ 0.64
RNF220-218ENST00000497469 CCL5P13501 91 aa19.07■□□□□ 0.64
RNF220-218ENST00000497469 BMP8BP34820 402 aa19.07■□□□□ 0.64
RNF220-218ENST00000497469 PARP10Q53GL7 1025 aa19.07■□□□□ 0.64
RNF220-218ENST00000497469 TBC1D16Q8TBP0 767 aa19.07■□□□□ 0.64
RNF220-218ENST00000497469 CELF1Q92879 486 aaKnown RBP19.07■□□□□ 0.64
RNF220-218ENST00000497469 PRUNE2Q8WUY3 3088 aa19.06■□□□□ 0.64
RNF220-218ENST00000497469 WNT10BO00744 389 aa19.06■□□□□ 0.64
RNF220-218ENST00000497469 TAF1CQ15572 869 aaPredicted RBP19.06■□□□□ 0.64
RNF220-218ENST00000497469 GIGYF2Q6Y7W6 1299 aaKnown RBP19.06■□□□□ 0.64
RNF220-218ENST00000497469 ZC3H12CQ9C0D7 883 aaKnown RBP19.06■□□□□ 0.64
RNF220-218ENST00000497469 GJB1P08034 283 aa19.05■□□□□ 0.64
RNF220-218ENST00000497469 TMC4Q7Z404 712 aa19.05■□□□□ 0.64
RNF220-218ENST00000497469 MXD3Q9BW11 206 aa19.05■□□□□ 0.64
RNF220-218ENST00000497469 RNF208Q9H0X6 261 aa19.05■□□□□ 0.64
RNF220-218ENST00000497469 SSC5DA1L4H1 1573 aa19.05■□□□□ 0.64
RNF220-218ENST00000497469 C7orf61Q8IZ16 206 aa19.04■□□□□ 0.64
RNF220-218ENST00000497469 TDHQ8IZJ6 230 aa19.04■□□□□ 0.64
RNF220-218ENST00000497469 PANK3Q9H999 370 aa19.04■□□□□ 0.64
RNF220-218ENST00000497469 MCM10Q7L590 875 aa19.03■□□□□ 0.64
RNF220-218ENST00000497469 U2AF1L4Q8WU68 220 aaKnown RBP19.03■□□□□ 0.64
RNF220-218ENST00000497469 ZFYVE28Q9HCC9 887 aa19.03■□□□□ 0.64
RNF220-218ENST00000497469 ALPK3Q96L96 1907 aa19.03■□□□□ 0.64
RNF220-218ENST00000497469 SYN1P17600 705 aa19.02■□□□□ 0.64
RNF220-218ENST00000497469 NECTIN2Q92692 538 aa19.02■□□□□ 0.64
RNF220-218ENST00000497469 TESPA1A2RU30 521 aaPredicted RBP19.01■□□□□ 0.63
RNF220-218ENST00000497469 TNFRSF10AO00220 468 aa19.01■□□□□ 0.63
RNF220-218ENST00000497469 DIAPH1O60610 1272 aaKnown RBP19.01■□□□□ 0.63
RNF220-218ENST00000497469 UFL1O94874 794 aa19.01■□□□□ 0.63
RNF220-218ENST00000497469 MAGEA10P43363 369 aaPredicted RBP19.01■□□□□ 0.63
RNF220-218ENST00000497469 PSME4Q14997 1843 aa19■□□□□ 0.63
RNF220-218ENST00000497469 LACTBP83111 547 aaPredicted RBP19■□□□□ 0.63
RNF220-218ENST00000497469 KIF22Q14807 665 aa19■□□□□ 0.63
RNF220-218ENST00000497469 MAFAQ8NHW3 353 aaPredicted RBP19■□□□□ 0.63
RNF220-218ENST00000497469 SYMPKQ92797 1274 aaKnown RBP19■□□□□ 0.63
RNF220-218ENST00000497469 MIS18AQ9NYP9 233 aa19■□□□□ 0.63
RNF220-218ENST00000497469 BIN2Q9UBW5 565 aaPredicted RBP19■□□□□ 0.63
RNF220-218ENST00000497469 U2SURPO15042 1029 aaKnown RBP18.99■□□□□ 0.63
RNF220-218ENST00000497469 GRK4P32298 578 aa18.99■□□□□ 0.63
RNF220-218ENST00000497469 MAP3K12Q12852 859 aa18.99■□□□□ 0.63
RNF220-218ENST00000497469 MAP3K11Q16584 847 aa18.99■□□□□ 0.63
RNF220-218ENST00000497469 APOBEC3FQ8IUX4 373 aaKnown RBP18.99■□□□□ 0.63
RNF220-218ENST00000497469 BRI3BPQ8WY22 251 aa18.99■□□□□ 0.63
RNF220-218ENST00000497469 USP17L3A6NCW0 530 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 USP17L4A6NCW7 530 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 CTGFP29279 349 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 USP17L1Q7RTZ2 530 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 PHACTR3Q96KR7 559 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 UNC93B1Q9H1C4 597 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 RIPOR2Q9Y4F9 1068 aa18.98■□□□□ 0.63
RNF220-218ENST00000497469 RAET1EQ8TD07 263 aa18.97■□□□□ 0.63
RNF220-218ENST00000497469 FBXW7Q969H0 707 aa18.97■□□□□ 0.63
RNF220-218ENST00000497469 OPTNQ96CV9 577 aa18.97■□□□□ 0.63
RNF220-218ENST00000497469 MS4A4AQ96JQ5 239 aa18.97■□□□□ 0.63
RNF220-218ENST00000497469 THUMPD2Q9BTF0 503 aaKnown RBP18.97■□□□□ 0.63
RNF220-218ENST00000497469 UBE2OQ9C0C9 1292 aaKnown RBP18.97■□□□□ 0.63
RNF220-218ENST00000497469 ELP3Q9H9T3 547 aa18.97■□□□□ 0.63
RNF220-218ENST00000497469 TRMT112Q9UI30 125 aaKnown RBP18.97■□□□□ 0.63
RNF220-218ENST00000497469 PPP1R12BO60237 982 aaPredicted RBP18.96■□□□□ 0.63
RNF220-218ENST00000497469 NLRP10Q86W26 655 aa18.96■□□□□ 0.63
RNF220-218ENST00000497469 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
RNF220-218ENST00000497469 DEFB129Q9H1M3 183 aa18.96■□□□□ 0.63
RNF220-218ENST00000497469 LAMA2P24043 3122 aaKnown RBP18.95■□□□□ 0.62
RNF220-218ENST00000497469 CCL15-CCL14A0A0B4J2E2 113 aa18.95■□□□□ 0.62
RNF220-218ENST00000497469 POTEB2H3BUK9 544 aa18.95■□□□□ 0.62
RNF220-218ENST00000497469 CCL15Q16663 113 aa18.95■□□□□ 0.62
RNF220-218ENST00000497469 OGFOD1Q8N543 542 aa18.95■□□□□ 0.62
RNF220-218ENST00000497469 DIS3LQ8TF46 1054 aaKnown RBP18.95■□□□□ 0.62
RNF220-218ENST00000497469 SH3TC1Q8TE82 1336 aa18.95■□□□□ 0.62
RNF220-218ENST00000497469 SGPL1O95470 568 aa18.94■□□□□ 0.62
RNF220-218ENST00000497469 PRMT2P55345 433 aa18.94■□□□□ 0.62
RNF220-218ENST00000497469 PAWRQ96IZ0 340 aaKnown RBP18.94■□□□□ 0.62
RNF220-218ENST00000497469 SNX27Q96L92 541 aa18.94■□□□□ 0.62
RNF220-218ENST00000497469 ANKIB1Q9P2G1 1089 aa18.94■□□□□ 0.62
RNF220-218ENST00000497469 SRRDQ9UH36 339 aa18.94■□□□□ 0.62
RNF220-218ENST00000497469 TFRCP02786 760 aaKnown RBP18.93■□□□□ 0.62
RNF220-218ENST00000497469 OSBPP22059 807 aa18.93■□□□□ 0.62
RNF220-218ENST00000497469 TRIM47Q96LD4 638 aa18.93■□□□□ 0.62
RNF220-218ENST00000497469 CDX2Q99626 313 aaPredicted RBP18.93■□□□□ 0.62
RNF220-218ENST00000497469 GGA1Q9UJY5 639 aa18.93■□□□□ 0.62
RNF220-218ENST00000497469 UBXN2AP68543 259 aa18.92■□□□□ 0.62
RNF220-218ENST00000497469 OTOFQ9HC10 1997 aa18.92■□□□□ 0.62
RNF220-218ENST00000497469 TLR2O60603 784 aa18.91■□□□□ 0.62
RNF220-218ENST00000497469 GNRH1P01148 92 aa18.91■□□□□ 0.62
RNF220-218ENST00000497469 PSMC4P43686 418 aa18.91■□□□□ 0.62
RNF220-218ENST00000497469 IREB2P48200 963 aaKnown RBP18.91■□□□□ 0.62
RNF220-218ENST00000497469 FAM109BQ6ICB4 259 aaPredicted RBP18.91■□□□□ 0.62
RNF220-218ENST00000497469 RTF1Q92541 710 aaKnown RBP18.91■□□□□ 0.62
RNF220-218ENST00000497469 MYPNQ86TC9 1320 aa18.91■□□□□ 0.62
RNF220-218ENST00000497469 COL1A1P02452 1464 aaPredicted RBP18.9■□□□□ 0.62
RNF220-218ENST00000497469 USP2O75604 605 aaPredicted RBP18.9■□□□□ 0.62
RNF220-218ENST00000497469 DACT2Q5SW24 774 aa18.9■□□□□ 0.62
RNF220-218ENST00000497469 NBPF12Q5TAG4 269 aaPredicted RBP18.9■□□□□ 0.62
RNF220-218ENST00000497469 PODXL2Q9NZ53 605 aa18.9■□□□□ 0.62
RNF220-218ENST00000497469 ANXA1P04083 346 aa18.89■□□□□ 0.61
RNF220-218ENST00000497469 PRKAR2BP31323 418 aa18.89■□□□□ 0.61
RNF220-218ENST00000497469 ZNF697Q5TEC3 545 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms