RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PNMA5Q96PV4 448 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 DNAJC25Q9H1X3 360 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 LRRC4BQ9NT99 713 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 RNF19AQ9NV58 838 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 KANSL3Q9P2N6 904 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 GDF2Q9UK05 429 aaPredicted RBP5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 WWC3Q9ULE0 1092 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 PRR12Q9ULL5 1215 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 SLC6A14Q9UN76 642 aa5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 NSFL1CQ9UNZ2 370 aaKnown RBP5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 RIMS1Q86UR5 1692 aaKnown RBP5.55□□□□□ -1.52
EXOSC3-208ENST00000496910 AQRO60306 1485 aaKnown RBP eCLIP5.54□□□□□ -1.522e-6■■■□□ 15.2
EXOSC3-208ENST00000496910 NFKBIEO00221 500 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 PHACTR2O75167 634 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 ARHGEF15O94989 841 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 ADH7P40394 386 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 PLCB3Q01970 1234 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 PLAURQ03405 335 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 COL9A3Q14050 684 aaPredicted RBP5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 C20orf204Q6ZNR8 217 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 CEP120Q8N960 986 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 LATS2Q9NRM7 1088 aa5.54□□□□□ -1.52
EXOSC3-208ENST00000496910 ELOA3CA0A087WX78 387 aaPredicted RBP5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 PNMA6FA0A0J9YX94 578 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 ELOA3DA6NLF2 546 aaPredicted RBP5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 CPNE3O75131 537 aaKnown RBP5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 POLR3DP05423 398 aaPredicted RBP5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 IRS1P35568 1242 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 MLLT1Q03111 559 aaPredicted RBP5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 ELOA3BQ3SY89 546 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 TTC39BQ5VTQ0 682 aaPredicted RBP5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 PI16Q6UXB8 463 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 ELOA3Q8NG57 546 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 TMC1Q8TDI8 760 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 CCDC74AQ96AQ1 378 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 NSUN5Q96P11 429 aaKnown RBP5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 LPIN3Q9BQK8 851 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 BCORL1Q5H9F3 1711 aa5.53□□□□□ -1.52
EXOSC3-208ENST00000496910 FANCD2Q9BXW9 1451 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 RBM47A0AV96 593 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 J3QW42 95 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 PSAPP07602 524 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 BCRP11274 1271 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 CES1P23141 567 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 NEUROD1Q13562 356 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 GRIK5Q16478 980 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 PERM1Q5SV97 790 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 HHIPQ96QV1 700 aa5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 UBE2OQ9C0C9 1292 aaKnown RBP5.52□□□□□ -1.53
EXOSC3-208ENST00000496910 PITPNM2Q9BZ72 1349 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 LOC102724428A0A0B4J2F2 783 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 ALBP02768 609 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 ZNF16P17020 682 aaPredicted RBP5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 MAPK8P45983 427 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 SIK1P57059 783 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 ATP11AP98196 1134 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 HYAL2Q12891 473 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 KIAA0319Q5VV43 1072 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 HFE2Q6ZVN8 426 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 GLIS3Q8NEA6 775 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 EPS8L3Q8TE67 593 aaKnown RBP5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 EDARADDQ8WWZ3 215 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 PMEPA1Q969W9 287 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 BTBD6Q96KE9 485 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 ZKSCAN3Q9BRR0 538 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 NPHS2Q9NP85 383 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 DZANK1Q9NVP4 752 aa5.51□□□□□ -1.53
EXOSC3-208ENST00000496910 A0A1W2PP55 124 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 PRPF40AO75400 957 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 TRPA1O75762 1119 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 LDHBP07195 334 aaKnown RBP5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 NEFLP07196 543 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 DGKGP49619 791 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 EAPPQ56P03 285 aaPredicted RBP5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 CHSY3Q70JA7 882 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 GALNT6Q8NCL4 622 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 TTC16Q8NEE8 873 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 FBF1Q8TES7 1133 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 TCF12Q99081 682 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 PRDM6Q9NQX0 595 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 FRRS1LQ9P0K9 344 aa5.5□□□□□ -1.53
EXOSC3-208ENST00000496910 ZNF335Q9H4Z2 1342 aaPredicted RBP5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 PHF20L1A8MW92 1017 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 CPB1P15086 417 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 BAG6P46379 1132 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 C8orf86Q6ZUL3 223 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 FAM35AQ86V20 835 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 MICALL1Q8N3F8 863 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 TTC9Q92623 222 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 BCL2L13Q9BXK5 485 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 OSBPL7Q9BZF2 842 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 BHLHE41Q9C0J9 482 aaPredicted RBP5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 RASSF4Q9H2L5 321 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 IGFLR1Q9H665 355 aa5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 BAZ1BQ9UIG0 1483 aaKnown RBP5.49□□□□□ -1.53
EXOSC3-208ENST00000496910 PREX1Q8TCU6 1659 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 TM4SF5O14894 197 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 EDN3P14138 238 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 TBC1D8BQ0IIM8 1120 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 GRM2Q14416 872 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms