RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 UFL1O94874 794 aa22.41■■□□□ 1.18
RGP1-202ENST00000496906 RGS3P49796 1198 aa22.41■■□□□ 1.18
RGP1-202ENST00000496906 CCDC93Q567U6 631 aa22.41■■□□□ 1.18
RGP1-202ENST00000496906 DPP8Q6V1X1 898 aaPredicted RBP22.41■■□□□ 1.18
RGP1-202ENST00000496906 POLLQ9UGP5 575 aa22.41■■□□□ 1.18
RGP1-202ENST00000496906 IRS2Q9Y4H2 1338 aa22.4■■□□□ 1.18
RGP1-202ENST00000496906 PDE1AP54750 535 aa22.4■■□□□ 1.18
RGP1-202ENST00000496906 SOGA3Q5TF21 947 aa22.4■■□□□ 1.18
RGP1-202ENST00000496906 STAP2Q9UGK3 403 aa22.4■■□□□ 1.18
RGP1-202ENST00000496906 BCS1LQ9Y276 419 aa22.4■■□□□ 1.18
RGP1-202ENST00000496906 KLRK1P26718 216 aa22.39■■□□□ 1.18
RGP1-202ENST00000496906 GRIPAP1Q4V328 841 aa22.39■■□□□ 1.18
RGP1-202ENST00000496906 GOLGB1Q14789 3259 aaKnown RBP22.39■■□□□ 1.17
RGP1-202ENST00000496906 TSHZ3Q63HK5 1081 aa22.38■■□□□ 1.17
RGP1-202ENST00000496906 RTFDC1Q9BY42 306 aaPredicted RBP22.38■■□□□ 1.17
RGP1-202ENST00000496906 OSBPL3Q9H4L5 887 aa22.38■■□□□ 1.17
RGP1-202ENST00000496906 TTC41PQ6P2S7 1318 aa22.38■■□□□ 1.17
RGP1-202ENST00000496906 C15orf52Q6ZUT6 534 aaKnown RBP22.38■■□□□ 1.17
RGP1-202ENST00000496906 RTKN2Q8IZC4 609 aa22.38■■□□□ 1.17
RGP1-202ENST00000496906 GPATCH3Q96I76 525 aa22.38■■□□□ 1.17
RGP1-202ENST00000496906 GPR101Q96P66 508 aaPredicted RBP22.38■■□□□ 1.17
RGP1-202ENST00000496906 ECHDC1Q9NTX5 307 aa22.38■■□□□ 1.17
RGP1-202ENST00000496906 MED23Q9ULK4 1368 aa22.37■■□□□ 1.17
RGP1-202ENST00000496906 C6orf229H3BNL8 230 aa22.37■■□□□ 1.17
RGP1-202ENST00000496906 GORABQ5T7V8 394 aa22.37■■□□□ 1.17
RGP1-202ENST00000496906 TXNRD3Q86VQ6 643 aa22.37■■□□□ 1.17
RGP1-202ENST00000496906 AOX1Q06278 1338 aa22.36■■□□□ 1.17
RGP1-202ENST00000496906 CCDC102BQ68D86 513 aa22.36■■□□□ 1.17
RGP1-202ENST00000496906 PI4K2BQ8TCG2 481 aa22.36■■□□□ 1.17
RGP1-202ENST00000496906 ARFGEF1Q9Y6D6 1849 aa22.36■■□□□ 1.17
RGP1-202ENST00000496906 PHKA1P46020 1223 aa22.35■■□□□ 1.17
RGP1-202ENST00000496906 GYG1P46976 350 aa22.35■■□□□ 1.17
RGP1-202ENST00000496906 CCDC158Q5M9N0 1113 aa22.35■■□□□ 1.17
RGP1-202ENST00000496906 FAM84BQ96KN1 310 aaPredicted RBP22.35■■□□□ 1.17
RGP1-202ENST00000496906 BCAMP50895 628 aa22.34■■□□□ 1.17
RGP1-202ENST00000496906 CAVIN4Q5BKX8 364 aa22.34■■□□□ 1.17
RGP1-202ENST00000496906 PSMD1Q99460 953 aa22.34■■□□□ 1.17
RGP1-202ENST00000496906 ERC2O15083 957 aa22.33■■□□□ 1.17
RGP1-202ENST00000496906 TTC39AQ5SRH9 613 aa22.33■■□□□ 1.17
RGP1-202ENST00000496906 FBXO33Q7Z6M2 555 aa22.33■■□□□ 1.17
RGP1-202ENST00000496906 SUPT20HQ8NEM7 779 aa22.33■■□□□ 1.17
RGP1-202ENST00000496906 ZNF512BQ96KM6 892 aaPredicted RBP22.33■■□□□ 1.17
RGP1-202ENST00000496906 EYA3Q99504 573 aa22.33■■□□□ 1.17
RGP1-202ENST00000496906 GLRX3O76003 335 aaKnown RBP22.33■■□□□ 1.16
RGP1-202ENST00000496906 ATP5JP18859 108 aa22.33■■□□□ 1.16
RGP1-202ENST00000496906 ARID4AP29374 1257 aaPredicted RBP22.33■■□□□ 1.16
RGP1-202ENST00000496906 FKBP4Q02790 459 aaKnown RBP eCLIP22.33■■□□□ 1.16
RGP1-202ENST00000496906 HIBADHP31937 336 aaKnown RBP22.32■■□□□ 1.16
RGP1-202ENST00000496906 WASHC4Q2M389 1173 aa22.32■■□□□ 1.16
RGP1-202ENST00000496906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.32■■□□□ 1.16
RGP1-202ENST00000496906 FER1L6Q2WGJ9 1857 aa22.31■■□□□ 1.16
RGP1-202ENST00000496906 UQCRFS1P1P0C7P4 283 aa22.31■■□□□ 1.16
RGP1-202ENST00000496906 TTC22Q5TAA0 569 aa22.31■■□□□ 1.16
RGP1-202ENST00000496906 ZNF804AQ7Z570 1209 aa22.31■■□□□ 1.16
RGP1-202ENST00000496906 VPS37DQ86XT2 251 aa22.31■■□□□ 1.16
RGP1-202ENST00000496906 ZC3H12CQ9C0D7 883 aaKnown RBP22.31■■□□□ 1.16
RGP1-202ENST00000496906 NFKBIEO00221 500 aa22.3■■□□□ 1.16
RGP1-202ENST00000496906 GSPT1P15170 499 aaKnown RBP22.3■■□□□ 1.16
RGP1-202ENST00000496906 BOLA2Q9H3K6 86 aa22.3■■□□□ 1.16
RGP1-202ENST00000496906 RIMBP2O15034 1052 aa22.29■■□□□ 1.16
RGP1-202ENST00000496906 KIAA2012Q0VF49 1180 aa22.29■■□□□ 1.16
RGP1-202ENST00000496906 SCARF1Q14162 830 aa22.29■■□□□ 1.16
RGP1-202ENST00000496906 TAOK3Q9H2K8 898 aa22.29■■□□□ 1.16
RGP1-202ENST00000496906 GNL3LQ9NVN8 582 aaKnown RBP22.29■■□□□ 1.16
RGP1-202ENST00000496906 LTBP3Q9NS15 1303 aa22.29■■□□□ 1.16
RGP1-202ENST00000496906 ZBTB22O15209 634 aa22.29■■□□□ 1.16
RGP1-202ENST00000496906 MCAMP43121 646 aa22.29■■□□□ 1.16
RGP1-202ENST00000496906 YBX3P16989 372 aaKnown RBP eCLIP22.28■■□□□ 1.16
RGP1-202ENST00000496906 RASGRF1Q13972 1273 aa22.28■■□□□ 1.16
RGP1-202ENST00000496906 AOC3Q16853 763 aa22.28■■□□□ 1.16
RGP1-202ENST00000496906 HAUS7Q99871 368 aa22.28■■□□□ 1.16
RGP1-202ENST00000496906 COA1Q9GZY4 146 aa22.28■■□□□ 1.16
RGP1-202ENST00000496906 CD209Q9NNX6 404 aa22.28■■□□□ 1.16
RGP1-202ENST00000496906 BMP2KLQ5H9B9 411 aa22.27■■□□□ 1.16
RGP1-202ENST00000496906 TDRD7Q8NHU6 1098 aaKnown RBP22.27■■□□□ 1.16
RGP1-202ENST00000496906 VPS33BQ9H267 617 aa22.27■■□□□ 1.16
RGP1-202ENST00000496906 ZNF277Q9NRM2 450 aaPredicted RBP22.27■■□□□ 1.16
RGP1-202ENST00000496906 IQSEC3Q9UPP2 1182 aaPredicted RBP22.27■■□□□ 1.16
RGP1-202ENST00000496906 COL1A1P02452 1464 aaPredicted RBP22.27■■□□□ 1.16
RGP1-202ENST00000496906 SEMA3EO15041 775 aa22.26■■□□□ 1.15
RGP1-202ENST00000496906 PPIP5K2O43314 1243 aa22.26■■□□□ 1.15
RGP1-202ENST00000496906 IL1R1P14778 569 aa22.26■■□□□ 1.15
RGP1-202ENST00000496906 PI16Q6UXB8 463 aa22.26■■□□□ 1.15
RGP1-202ENST00000496906 HMG20BQ9P0W2 317 aa22.26■■□□□ 1.15
RGP1-202ENST00000496906 NDUFB9Q9Y6M9 179 aa22.26■■□□□ 1.15
RGP1-202ENST00000496906 SPATA5Q8NB90 893 aa22.25■■□□□ 1.15
RGP1-202ENST00000496906 DNAJC2Q99543 621 aaKnown RBP22.25■■□□□ 1.15
RGP1-202ENST00000496906 AKAP11Q9UKA4 1901 aa22.25■■□□□ 1.15
RGP1-202ENST00000496906 RASSF7Q02833 373 aa22.25■■□□□ 1.15
RGP1-202ENST00000496906 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
RGP1-202ENST00000496906 SNRKQ9NRH2 765 aa22.25■■□□□ 1.15
RGP1-202ENST00000496906 DENND2AQ9ULE3 1009 aa22.25■■□□□ 1.15
RGP1-202ENST00000496906 PDS5AQ29RF7 1337 aaKnown RBP22.24■■□□□ 1.15
RGP1-202ENST00000496906 MAP4K4O95819 1239 aaPredicted RBP22.24■■□□□ 1.15
RGP1-202ENST00000496906 IARSP41252 1262 aaKnown RBP22.24■■□□□ 1.15
RGP1-202ENST00000496906 ZAP70P43403 619 aa22.24■■□□□ 1.15
RGP1-202ENST00000496906 DOK7Q18PE1 504 aa22.24■■□□□ 1.15
RGP1-202ENST00000496906 DBNDD1Q9H9R9 158 aa22.24■■□□□ 1.15
RGP1-202ENST00000496906 FRAT2O75474 233 aaPredicted RBP22.23■■□□□ 1.15
RGP1-202ENST00000496906 SDSP20132 328 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms