RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 UBE2HP62256 183 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 STK3Q13188 491 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 ZNF34Q8IZ26 560 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 CNNM1Q9NRU3 951 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 DOCK2Q92608 1830 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 DTNBO60941 627 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 PPP1R9BQ96SB3 815 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 CCDC87Q9NVE4 849 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 SPATA31A5Q5VU36 1347 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 SPATA31A7Q8IWB4 1347 aa15.48■□□□□ 0.07
GARNL3-220ENST00000496711 EIF5P55010 431 aaKnown RBP15.47■□□□□ 0.07
GARNL3-220ENST00000496711 DNM1Q05193 864 aaKnown RBP15.47■□□□□ 0.07
GARNL3-220ENST00000496711 SCARF1Q14162 830 aa15.47■□□□□ 0.07
GARNL3-220ENST00000496711 CDC37L1Q7L3B6 337 aa15.47■□□□□ 0.07
GARNL3-220ENST00000496711 DHX32Q7L7V1 743 aaKnown RBP15.47■□□□□ 0.07
GARNL3-220ENST00000496711 VGLL2Q8N8G2 317 aa15.47■□□□□ 0.07
GARNL3-220ENST00000496711 TRIM44Q96DX7 344 aaPredicted RBP15.47■□□□□ 0.07
GARNL3-220ENST00000496711 AK7Q96M32 723 aa15.47■□□□□ 0.07
GARNL3-220ENST00000496711 A0A0G2JS52 829 aa15.46■□□□□ 0.07
GARNL3-220ENST00000496711 ZAP70P43403 619 aa15.46■□□□□ 0.07
GARNL3-220ENST00000496711 OSBP2Q969R2 916 aa15.46■□□□□ 0.07
GARNL3-220ENST00000496711 RRAGDQ9NQL2 400 aaPredicted RBP15.46■□□□□ 0.07
GARNL3-220ENST00000496711 CRKLP46109 303 aaKnown RBP15.46■□□□□ 0.06
GARNL3-220ENST00000496711 FGD1P98174 961 aa15.46■□□□□ 0.06
GARNL3-220ENST00000496711 INTS5Q6P9B9 1019 aaKnown RBP15.46■□□□□ 0.06
GARNL3-220ENST00000496711 MARCH10Q8NA82 808 aaPredicted RBP15.46■□□□□ 0.06
GARNL3-220ENST00000496711 APPBP2Q92624 585 aa15.46■□□□□ 0.06
GARNL3-220ENST00000496711 BRF1Q92994 677 aa15.46■□□□□ 0.06
GARNL3-220ENST00000496711 ZNF512BQ96KM6 892 aaPredicted RBP15.46■□□□□ 0.06
GARNL3-220ENST00000496711 ATRNO75882 1429 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 A0A1B0GUL6 1792 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 E7EWF7 191 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 WASHC4Q2M389 1173 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 CCDC183Q5T5S1 534 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 TSPY26PQ9H489 355 aa15.45■□□□□ 0.06
GARNL3-220ENST00000496711 CHD4Q14839 1912 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 LOC102724428A0A0B4J2F2 783 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 MCAMP43121 646 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 SIK1P57059 783 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 KRT85P78386 507 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 BARGINQ6ZT62 677 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 LRRC2Q9BYS8 371 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 AGXT2Q9BYV1 514 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.44■□□□□ 0.06
GARNL3-220ENST00000496711 CTNNA3Q9UI47 895 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 PFKFB2O60825 505 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 PDE8BO95263 885 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 EXOSC10Q01780 885 aaKnown RBP15.44■□□□□ 0.06
GARNL3-220ENST00000496711 PI16Q6UXB8 463 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 MROH5Q6ZUA9 1318 aa15.44■□□□□ 0.06
GARNL3-220ENST00000496711 A0A0G2JLW4 131 aa15.43■□□□□ 0.06
GARNL3-220ENST00000496711 JAK2O60674 1132 aa15.43■□□□□ 0.06
GARNL3-220ENST00000496711 SCRN1Q12765 414 aa15.43■□□□□ 0.06
GARNL3-220ENST00000496711 TTF1Q15361 905 aaPredicted RBP15.43■□□□□ 0.06
GARNL3-220ENST00000496711 ZSCAN25Q6NSZ9 544 aa15.43■□□□□ 0.06
GARNL3-220ENST00000496711 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
GARNL3-220ENST00000496711 LLPHQ9BRT6 129 aaKnown RBP15.43■□□□□ 0.06
GARNL3-220ENST00000496711 SCN7AQ01118 1682 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 ELP1O95163 1332 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 NUTM2BA6NNL0 878 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 NUTM2EB1AL46 878 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 FOXP2O15409 715 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 LETM1O95202 739 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 ITPK1Q13572 414 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 PUM3Q15397 648 aaKnown RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 PARP10Q53GL7 1025 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 SUSD4Q5VX71 490 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 NUTM2AQ8IVF1 878 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 UQCRFS1P1P0C7P4 283 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 ARID4AP29374 1257 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 IMMTQ16891 758 aaKnown RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 TTLL5Q6EMB2 1281 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 SMARCC2Q8TAQ2 1214 aa15.42■□□□□ 0.06
GARNL3-220ENST00000496711 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
GARNL3-220ENST00000496711 GPAA1O43292 621 aa15.41■□□□□ 0.06
GARNL3-220ENST00000496711 APOBRQ0VD83 1088 aa15.41■□□□□ 0.06
GARNL3-220ENST00000496711 LPIN2Q92539 896 aa15.41■□□□□ 0.06
GARNL3-220ENST00000496711 PUS7LQ9H0K6 701 aaKnown RBP15.41■□□□□ 0.06
GARNL3-220ENST00000496711 RTL9Q8NET4 1388 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 ESPNB1AK53 854 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 ADD2P35612 726 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 CCDC102BQ68D86 513 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 KLHL34Q8N239 644 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 FAM184AQ8NB25 1140 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 SMARCC1Q92922 1105 aaPredicted RBP15.4■□□□□ 0.06
GARNL3-220ENST00000496711 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
GARNL3-220ENST00000496711 FGFR2P21802 821 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 PHKA1P46020 1223 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 HMGN5P82970 282 aaKnown RBP15.4■□□□□ 0.06
GARNL3-220ENST00000496711 TTC6Q86TZ1 520 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 FBXL16Q8N461 479 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 NSUN7Q8NE18 718 aaKnown RBP15.4■□□□□ 0.06
GARNL3-220ENST00000496711 PDLIM2Q96JY6 352 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 SCAND2PQ9GZW5 306 aaPredicted RBP15.4■□□□□ 0.06
GARNL3-220ENST00000496711 KIF3AQ9Y496 699 aa15.4■□□□□ 0.06
GARNL3-220ENST00000496711 C4AP0C0L4 1744 aa15.39■□□□□ 0.06
GARNL3-220ENST00000496711 C4BP0C0L5 1744 aa15.39■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms