RNA–Protein interactions for RNA: ENST00000496527.1

CHRD-217, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-217ENST00000496527 C15orf52Q6ZUT6 534 aaKnown RBP28.34■■■□□ 2.13
CHRD-217ENST00000496527 ZBTB12Q9Y330 459 aaPredicted RBP28.33■■■□□ 2.13
CHRD-217ENST00000496527 SRGAP3O43295 1099 aa28.32■■■□□ 2.12
CHRD-217ENST00000496527 VIL1P09327 827 aaKnown RBP28.32■■■□□ 2.12
CHRD-217ENST00000496527 MTX1Q13505 466 aa28.32■■■□□ 2.12
CHRD-217ENST00000496527 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.32■■■□□ 2.12
CHRD-217ENST00000496527 FBXO3Q9UK99 471 aa28.32■■■□□ 2.12
CHRD-217ENST00000496527 A0A1B0GUL6 1792 aa28.32■■■□□ 2.12
CHRD-217ENST00000496527 USP17L3A6NCW0 530 aa28.31■■■□□ 2.12
CHRD-217ENST00000496527 USP17L4A6NCW7 530 aa28.31■■■□□ 2.12
CHRD-217ENST00000496527 ZBTB7BO15156 539 aaPredicted RBP28.31■■■□□ 2.12
CHRD-217ENST00000496527 RPS12P25398 132 aaKnown RBP28.31■■■□□ 2.12
CHRD-217ENST00000496527 USP17L1Q7RTZ2 530 aa28.31■■■□□ 2.12
CHRD-217ENST00000496527 ZNF804AQ7Z570 1209 aa28.31■■■□□ 2.12
CHRD-217ENST00000496527 LDHDQ86WU2 507 aa28.31■■■□□ 2.12
CHRD-217ENST00000496527 DPF2Q92785 391 aa28.31■■■□□ 2.12
CHRD-217ENST00000496527 SIL1Q9H173 461 aa28.31■■■□□ 2.12
CHRD-217ENST00000496527 IRS2Q9Y4H2 1338 aa28.3■■■□□ 2.12
CHRD-217ENST00000496527 POTEIP0CG38 1075 aa28.3■■■□□ 2.12
CHRD-217ENST00000496527 POTEJP0CG39 1038 aa28.3■■■□□ 2.12
CHRD-217ENST00000496527 CNOT7Q9UIV1 285 aaKnown RBP28.3■■■□□ 2.12
CHRD-217ENST00000496527 CLEC11AQ9Y240 323 aa28.3■■■□□ 2.12
CHRD-217ENST00000496527 CIAO1O76071 339 aa28.29■■■□□ 2.12
CHRD-217ENST00000496527 PDE8BO95263 885 aa28.29■■■□□ 2.12
CHRD-217ENST00000496527 CHADLQ6NUI6 762 aa28.29■■■□□ 2.12
CHRD-217ENST00000496527 CD209Q9NNX6 404 aa28.29■■■□□ 2.12
CHRD-217ENST00000496527 COPRSQ9NQ92 184 aa28.29■■■□□ 2.12
CHRD-217ENST00000496527 ADARB2Q9NS39 739 aaKnown RBP28.29■■■□□ 2.12
CHRD-217ENST00000496527 PA2G4Q9UQ80 394 aaKnown RBP28.29■■■□□ 2.12
CHRD-217ENST00000496527 SCN9AQ15858 1988 aa28.29■■■□□ 2.12
CHRD-217ENST00000496527 H7C1D1 291 aa28.28■■■□□ 2.12
CHRD-217ENST00000496527 RSBN1LQ6PCB5 846 aaPredicted RBP28.28■■■□□ 2.12
CHRD-217ENST00000496527 USP50Q70EL3 339 aaPredicted RBP28.28■■■□□ 2.12
CHRD-217ENST00000496527 ATG9AQ7Z3C6 839 aa28.28■■■□□ 2.12
CHRD-217ENST00000496527 MICALL2Q8IY33 904 aa28.28■■■□□ 2.12
CHRD-217ENST00000496527 VGLL2Q8N8G2 317 aa28.28■■■□□ 2.12
CHRD-217ENST00000496527 FBXW7Q969H0 707 aa28.28■■■□□ 2.12
CHRD-217ENST00000496527 STRIP1Q5VSL9 837 aa28.26■■■□□ 2.11
CHRD-217ENST00000496527 AGBL3Q8NEM8 1001 aa28.26■■■□□ 2.11
CHRD-217ENST00000496527 C1orf115Q9H7X2 142 aa28.26■■■□□ 2.11
CHRD-217ENST00000496527 HSPA6P17066 643 aa28.25■■■□□ 2.11
CHRD-217ENST00000496527 IL15P40933 162 aaPredicted RBP28.25■■■□□ 2.11
CHRD-217ENST00000496527 MVPQ14764 893 aaKnown RBP28.25■■■□□ 2.11
CHRD-217ENST00000496527 PUM3Q15397 648 aaKnown RBP28.25■■■□□ 2.11
CHRD-217ENST00000496527 TTLL5Q6EMB2 1281 aa28.25■■■□□ 2.11
CHRD-217ENST00000496527 CEP126Q9P2H0 1117 aa28.25■■■□□ 2.11
CHRD-217ENST00000496527 COG6Q9Y2V7 657 aa28.25■■■□□ 2.11
CHRD-217ENST00000496527 PNMA6EA0A0J9YXQ4 647 aa28.24■■■□□ 2.11
CHRD-217ENST00000496527 SHTN1A0MZ66 631 aa28.24■■■□□ 2.11
CHRD-217ENST00000496527 HIBADHP31937 336 aaKnown RBP28.24■■■□□ 2.11
CHRD-217ENST00000496527 DDX19BQ9UMR2 479 aa28.24■■■□□ 2.11
CHRD-217ENST00000496527 IFIT1P09914 478 aaKnown RBP28.23■■■□□ 2.11
CHRD-217ENST00000496527 IL1R1P14778 569 aa28.23■■■□□ 2.11
CHRD-217ENST00000496527 GYG1P46976 350 aa28.23■■■□□ 2.11
CHRD-217ENST00000496527 GTF2IP78347 998 aa28.23■■■□□ 2.11
CHRD-217ENST00000496527 PDE3AQ14432 1141 aa28.23■■■□□ 2.11
CHRD-217ENST00000496527 DACT2Q5SW24 774 aa28.23■■■□□ 2.11
CHRD-217ENST00000496527 FAM84BQ96KN1 310 aaPredicted RBP28.23■■■□□ 2.11
CHRD-217ENST00000496527 ATP8B2P98198 1209 aa28.22■■■□□ 2.11
CHRD-217ENST00000496527 CAVIN4Q5BKX8 364 aa28.22■■■□□ 2.11
CHRD-217ENST00000496527 VPS37DQ86XT2 251 aa28.22■■■□□ 2.11
CHRD-217ENST00000496527 MYO3BQ8WXR4 1341 aa28.21■■■□□ 2.11
CHRD-217ENST00000496527 ZNF609O15014 1411 aa28.21■■■□□ 2.11
CHRD-217ENST00000496527 PSME4Q14997 1843 aa28.21■■■□□ 2.11
CHRD-217ENST00000496527 FGFR2P21802 821 aa28.21■■■□□ 2.11
CHRD-217ENST00000496527 LPIN2Q92539 896 aa28.21■■■□□ 2.11
CHRD-217ENST00000496527 GMLQ99445 158 aa28.21■■■□□ 2.11
CHRD-217ENST00000496527 CHMP4BQ9H444 224 aaKnown RBP28.21■■■□□ 2.11
CHRD-217ENST00000496527 SLC5A1P13866 664 aa28.2■■■□□ 2.1
CHRD-217ENST00000496527 SAMD7Q7Z3H4 446 aa28.2■■■□□ 2.1
CHRD-217ENST00000496527 TRPM4Q8TD43 1214 aa28.2■■■□□ 2.1
CHRD-217ENST00000496527 MXD3Q9BW11 206 aa28.2■■■□□ 2.1
CHRD-217ENST00000496527 USP17L8P0C7I0 530 aa28.19■■■□□ 2.1
CHRD-217ENST00000496527 MAP1SQ66K74 1059 aaPredicted RBP28.19■■■□□ 2.1
CHRD-217ENST00000496527 FBXO33Q7Z6M2 555 aa28.19■■■□□ 2.1
CHRD-217ENST00000496527 TDRD7Q8NHU6 1098 aaKnown RBP28.19■■■□□ 2.1
CHRD-217ENST00000496527 ADAMTSL1Q8N6G6 1762 aa28.19■■■□□ 2.1
CHRD-217ENST00000496527 G3BP1Q13283 466 aaKnown RBP eCLIP28.18■■■□□ 2.1
CHRD-217ENST00000496527 POLA2Q14181 598 aa28.18■■■□□ 2.1
CHRD-217ENST00000496527 TBC1D10BQ4KMP7 808 aaPredicted RBP28.18■■■□□ 2.1
CHRD-217ENST00000496527 RBM26Q5T8P6 1007 aaKnown RBP28.18■■■□□ 2.1
CHRD-217ENST00000496527 C20orf194Q5TEA3 1177 aa28.18■■■□□ 2.1
CHRD-217ENST00000496527 CNTROBQ8N137 903 aa28.18■■■□□ 2.1
CHRD-217ENST00000496527 SSH3Q8TE77 659 aa28.18■■■□□ 2.1
CHRD-217ENST00000496527 SASH1O94885 1247 aa28.17■■■□□ 2.1
CHRD-217ENST00000496527 APLP1P51693 650 aa28.17■■■□□ 2.1
CHRD-217ENST00000496527 HIRAP54198 1017 aaPredicted RBP28.17■■■□□ 2.1
CHRD-217ENST00000496527 ZNF280AP59817 542 aaPredicted RBP28.17■■■□□ 2.1
CHRD-217ENST00000496527 ATP2B3Q16720 1220 aa28.17■■■□□ 2.1
CHRD-217ENST00000496527 BCAMP50895 628 aa28.16■■■□□ 2.1
CHRD-217ENST00000496527 KIF4BQ2VIQ3 1234 aa28.16■■■□□ 2.1
CHRD-217ENST00000496527 OGFOD1Q8N543 542 aa28.16■■■□□ 2.1
CHRD-217ENST00000496527 ZC3H15Q8WU90 426 aaKnown RBP28.16■■■□□ 2.1
CHRD-217ENST00000496527 FRAT2O75474 233 aaPredicted RBP28.15■■■□□ 2.1
CHRD-217ENST00000496527 CEP85Q6P2H3 762 aa28.15■■■□□ 2.1
CHRD-217ENST00000496527 JAG2Q9Y219 1238 aa28.15■■■□□ 2.1
CHRD-217ENST00000496527 ITGBL1O95965 494 aaPredicted RBP28.14■■■□□ 2.1
CHRD-217ENST00000496527 TFCP2Q12800 502 aa28.14■■■□□ 2.1
CHRD-217ENST00000496527 ZBTB40Q9NUA8 1239 aa28.14■■■□□ 2.1
CHRD-217ENST00000496527 PGAP2Q9UHJ9 254 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms