RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 SCAF8Q9UPN6 1271 aaKnown RBP16.68■□□□□ 0.26
USF1-207ENST00000496363 A0A1B0GUL6 1792 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 CA12O43570 354 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
USF1-207ENST00000496363 CASP7P55210 303 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 FKBP5Q13451 457 aaPredicted RBP16.67■□□□□ 0.26
USF1-207ENST00000496363 PODNQ7Z5L7 613 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 MYOZ2Q9NPC6 264 aa16.67■□□□□ 0.26
USF1-207ENST00000496363 KLRK1P26718 216 aa16.66■□□□□ 0.26
USF1-207ENST00000496363 ZNF157P51786 506 aaPredicted RBP16.66■□□□□ 0.26
USF1-207ENST00000496363 DNAAF4Q8WXU2 420 aa16.66■□□□□ 0.26
USF1-207ENST00000496363 FBXW7Q969H0 707 aa16.66■□□□□ 0.26
USF1-207ENST00000496363 PLA2G12BQ9BX93 195 aa16.66■□□□□ 0.26
USF1-207ENST00000496363 VAMP4O75379 141 aa16.65■□□□□ 0.26
USF1-207ENST00000496363 ITGA6P23229 1130 aa16.65■□□□□ 0.26
USF1-207ENST00000496363 IGHMBP2P38935 993 aaKnown RBP16.65■□□□□ 0.26
USF1-207ENST00000496363 EXOSC9Q06265 439 aaKnown RBP16.65■□□□□ 0.26
USF1-207ENST00000496363 DACT2Q5SW24 774 aa16.65■□□□□ 0.26
USF1-207ENST00000496363 PAPPA2Q9BXP8 1791 aa16.64■□□□□ 0.25
USF1-207ENST00000496363 KIF23Q02241 960 aaPredicted RBP16.64■□□□□ 0.25
USF1-207ENST00000496363 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
USF1-207ENST00000496363 MYH16Q9H6N6 1097 aa16.64■□□□□ 0.25
USF1-207ENST00000496363 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
USF1-207ENST00000496363 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 F6X3S4 739 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 ANP32CO43423 234 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 CSF1RP07333 972 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 SLC10A3P09131 477 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 NBPF9Q3BBW0 867 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 WDR63Q8IWG1 891 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 LINS1Q8NG48 757 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 CCDC102AQ96A19 550 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 LEMD3Q9Y2U8 911 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
USF1-207ENST00000496363 PRAMEF18Q5VWM3 479 aa16.62■□□□□ 0.25
USF1-207ENST00000496363 MOB2Q70IA6 237 aa16.62■□□□□ 0.25
USF1-207ENST00000496363 MPHOSPH8Q99549 860 aa16.62■□□□□ 0.25
USF1-207ENST00000496363 MCOLN1Q9GZU1 580 aa16.62■□□□□ 0.25
USF1-207ENST00000496363 COA1Q9GZY4 146 aa16.62■□□□□ 0.25
USF1-207ENST00000496363 PITPNM2Q9BZ72 1349 aa16.62■□□□□ 0.25
USF1-207ENST00000496363 SNAP23O00161 211 aa16.61■□□□□ 0.25
USF1-207ENST00000496363 SASH1O94885 1247 aa16.61■□□□□ 0.25
USF1-207ENST00000496363 CHRNDQ07001 517 aa16.61■□□□□ 0.25
USF1-207ENST00000496363 STRIP1Q5VSL9 837 aa16.61■□□□□ 0.25
USF1-207ENST00000496363 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
USF1-207ENST00000496363 ANKRD2Q9GZV1 360 aa16.61■□□□□ 0.25
USF1-207ENST00000496363 KCNJ4P48050 445 aa16.6■□□□□ 0.25
USF1-207ENST00000496363 FOXO4P98177 505 aa16.6■□□□□ 0.25
USF1-207ENST00000496363 DGKZQ13574 1117 aa16.6■□□□□ 0.25
USF1-207ENST00000496363 RNF186Q9NXI6 227 aa16.6■□□□□ 0.25
USF1-207ENST00000496363 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 WNT10BO00744 389 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 TAF5LO75529 589 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 TRPA1O75762 1119 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 BEND3Q5T5X7 828 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 TTLL5Q6EMB2 1281 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
USF1-207ENST00000496363 CSRNP1Q96S65 589 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
USF1-207ENST00000496363 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
USF1-207ENST00000496363 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
USF1-207ENST00000496363 GTF2IP78347 998 aa16.58■□□□□ 0.24
USF1-207ENST00000496363 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
USF1-207ENST00000496363 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
USF1-207ENST00000496363 SAGE1Q9NXZ1 904 aa16.58■□□□□ 0.24
USF1-207ENST00000496363 IRS2Q9Y4H2 1338 aa16.58■□□□□ 0.24
USF1-207ENST00000496363 ECM29Q5VYK3 1845 aa16.57■□□□□ 0.24
USF1-207ENST00000496363 FKBP1BP68106 108 aa16.57■□□□□ 0.24
USF1-207ENST00000496363 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
USF1-207ENST00000496363 CD209Q9NNX6 404 aa16.57■□□□□ 0.24
USF1-207ENST00000496363 TNRC18O15417 2968 aaPredicted RBP16.57■□□□□ 0.24
USF1-207ENST00000496363 IFIT5Q13325 482 aaKnown RBP16.56■□□□□ 0.24
USF1-207ENST00000496363 TTLL12Q14166 644 aaPredicted RBP16.56■□□□□ 0.24
USF1-207ENST00000496363 LMBR1LQ6UX01 489 aa16.56■□□□□ 0.24
USF1-207ENST00000496363 ZNF594Q96JF6 807 aaPredicted RBP16.56■□□□□ 0.24
USF1-207ENST00000496363 CERS5Q8N5B7 392 aa16.55■□□□□ 0.24
USF1-207ENST00000496363 ZBED3Q96IU2 234 aaPredicted RBP16.55■□□□□ 0.24
USF1-207ENST00000496363 PCDHAC2Q9Y5I4 1007 aa16.55■□□□□ 0.24
USF1-207ENST00000496363 GRM8O00222 908 aa16.54■□□□□ 0.24
USF1-207ENST00000496363 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
USF1-207ENST00000496363 HDAC9Q9UKV0 1011 aa16.54■□□□□ 0.24
USF1-207ENST00000496363 JAG2Q9Y219 1238 aa16.54■□□□□ 0.24
USF1-207ENST00000496363 PLIN1O60240 522 aa16.53■□□□□ 0.24
USF1-207ENST00000496363 MKRN3Q13064 507 aaKnown RBP16.53■□□□□ 0.24
USF1-207ENST00000496363 PRKG1Q13976 671 aa16.53■□□□□ 0.24
USF1-207ENST00000496363 SLC4A10Q6U841 1118 aa16.53■□□□□ 0.24
USF1-207ENST00000496363 APOBEC3FQ8IUX4 373 aaKnown RBP16.53■□□□□ 0.24
USF1-207ENST00000496363 F8W031 263 aaPredicted RBP16.52■□□□□ 0.24
USF1-207ENST00000496363 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
USF1-207ENST00000496363 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.24
USF1-207ENST00000496363 C9orf78Q9NZ63 289 aaPredicted RBP16.52■□□□□ 0.24
USF1-207ENST00000496363 FZD1Q9UP38 647 aa16.52■□□□□ 0.24
USF1-207ENST00000496363 AOX1Q06278 1338 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 IL1R1P14778 569 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 NF2P35240 595 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms