RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 ERC1Q8IUD2 1116 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 PSMD1Q99460 953 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
PTPN7-218ENST00000496197 LEMD3Q9Y2U8 911 aa16.66■□□□□ 0.26
PTPN7-218ENST00000496197 PSME4Q14997 1843 aa16.65■□□□□ 0.26
PTPN7-218ENST00000496197 RIMBP2O15034 1052 aa16.65■□□□□ 0.26
PTPN7-218ENST00000496197 UBE4AQ14139 1066 aa16.65■□□□□ 0.26
PTPN7-218ENST00000496197 AOC3Q16853 763 aa16.65■□□□□ 0.26
PTPN7-218ENST00000496197 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
PTPN7-218ENST00000496197 ARHGAP27Q6ZUM4 889 aa16.65■□□□□ 0.26
PTPN7-218ENST00000496197 SKAP1Q86WV1 359 aa16.65■□□□□ 0.26
PTPN7-218ENST00000496197 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
PTPN7-218ENST00000496197 CCDC8Q9H0W5 538 aaPredicted RBP16.65■□□□□ 0.26
PTPN7-218ENST00000496197 LTBP3Q9NS15 1303 aa16.64■□□□□ 0.26
PTPN7-218ENST00000496197 AKAP11Q9UKA4 1901 aa16.64■□□□□ 0.25
PTPN7-218ENST00000496197 MED23Q9ULK4 1368 aa16.64■□□□□ 0.25
PTPN7-218ENST00000496197 KCNJ4P48050 445 aa16.64■□□□□ 0.25
PTPN7-218ENST00000496197 OTUD7AQ8TE49 926 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-218ENST00000496197 LPIN2Q92539 896 aa16.64■□□□□ 0.25
PTPN7-218ENST00000496197 DBNDD2Q9BQY9 259 aa16.64■□□□□ 0.25
PTPN7-218ENST00000496197 TMX4Q9H1E5 349 aaPredicted RBP16.64■□□□□ 0.25
PTPN7-218ENST00000496197 TAOK3Q9H2K8 898 aa16.64■□□□□ 0.25
PTPN7-218ENST00000496197 GPR108Q9NPR9 543 aa16.64■□□□□ 0.25
PTPN7-218ENST00000496197 DBNLQ9UJU6 430 aaKnown RBP16.64■□□□□ 0.25
PTPN7-218ENST00000496197 GYG1P46976 350 aa16.63■□□□□ 0.25
PTPN7-218ENST00000496197 NUCB1Q02818 461 aa16.63■□□□□ 0.25
PTPN7-218ENST00000496197 AACSQ86V21 672 aa16.63■□□□□ 0.25
PTPN7-218ENST00000496197 LNPKQ9C0E8 428 aa16.63■□□□□ 0.25
PTPN7-218ENST00000496197 MYO5AQ9Y4I1 1855 aaKnown RBP16.62■□□□□ 0.25
PTPN7-218ENST00000496197 WASHC4Q2M389 1173 aa16.62■□□□□ 0.25
PTPN7-218ENST00000496197 GRIPAP1Q4V328 841 aa16.62■□□□□ 0.25
PTPN7-218ENST00000496197 CENPQQ7L2Z9 268 aaPredicted RBP16.62■□□□□ 0.25
PTPN7-218ENST00000496197 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
PTPN7-218ENST00000496197 NEUROD6Q96NK8 337 aa16.62■□□□□ 0.25
PTPN7-218ENST00000496197 COL1A1P02452 1464 aaPredicted RBP16.62■□□□□ 0.25
PTPN7-218ENST00000496197 SLC5A1P13866 664 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 IARSP41252 1262 aaKnown RBP16.61■□□□□ 0.25
PTPN7-218ENST00000496197 BCAMP50895 628 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 KIAA2012Q0VF49 1180 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 C15orf52Q6ZUT6 534 aaKnown RBP16.61■□□□□ 0.25
PTPN7-218ENST00000496197 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
PTPN7-218ENST00000496197 FAM84BQ96KN1 310 aaPredicted RBP16.61■□□□□ 0.25
PTPN7-218ENST00000496197 AKAP2Q9Y2D5 859 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 SALL3Q9BXA9 1300 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 PPIP5K2O43314 1243 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
PTPN7-218ENST00000496197 PDE4AP27815 886 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 PHKA1P46020 1223 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 DOK7Q18PE1 504 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 CHD1LQ86WJ1 897 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
PTPN7-218ENST00000496197 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
PTPN7-218ENST00000496197 FBXO33Q7Z6M2 555 aa16.6■□□□□ 0.25
PTPN7-218ENST00000496197 SUPT20HQ8NEM7 779 aa16.6■□□□□ 0.25
PTPN7-218ENST00000496197 EYA3Q99504 573 aa16.6■□□□□ 0.25
PTPN7-218ENST00000496197 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
PTPN7-218ENST00000496197 CCDC102BQ68D86 513 aa16.59■□□□□ 0.25
PTPN7-218ENST00000496197 ZC3H12CQ9C0D7 883 aaKnown RBP16.59■□□□□ 0.25
PTPN7-218ENST00000496197 KCNQ5Q9NR82 932 aa16.59■□□□□ 0.25
PTPN7-218ENST00000496197 IQSEC3Q9UPP2 1182 aaPredicted RBP16.59■□□□□ 0.25
PTPN7-218ENST00000496197 GRIN3BO60391 1043 aa16.58■□□□□ 0.24
PTPN7-218ENST00000496197 SCARF1Q14162 830 aa16.58■□□□□ 0.24
PTPN7-218ENST00000496197 LARGE2Q8N3Y3 721 aa16.58■□□□□ 0.24
PTPN7-218ENST00000496197 ECE2O60344 883 aa16.57■□□□□ 0.24
PTPN7-218ENST00000496197 IFIT2P09913 472 aaKnown RBP16.57■□□□□ 0.24
PTPN7-218ENST00000496197 CD209Q9NNX6 404 aa16.57■□□□□ 0.24
PTPN7-218ENST00000496197 LMNB1P20700 586 aa16.56■□□□□ 0.24
PTPN7-218ENST00000496197 HIBADHP31937 336 aaKnown RBP16.56■□□□□ 0.24
PTPN7-218ENST00000496197 PI16Q6UXB8 463 aa16.56■□□□□ 0.24
PTPN7-218ENST00000496197 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
PTPN7-218ENST00000496197 DOCK2Q92608 1830 aa16.56■□□□□ 0.24
PTPN7-218ENST00000496197 IL1R1P14778 569 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 ARID4AP29374 1257 aaPredicted RBP16.55■□□□□ 0.24
PTPN7-218ENST00000496197 MCAMP43121 646 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 CAVIN4Q5BKX8 364 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 C9orf131Q5VYM1 1079 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 ZNF804AQ7Z570 1209 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 TDRD7Q8NHU6 1098 aaKnown RBP16.55■□□□□ 0.24
PTPN7-218ENST00000496197 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 VPS33BQ9H267 617 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 ADAMTSL1Q8N6G6 1762 aa16.55■□□□□ 0.24
PTPN7-218ENST00000496197 RASGRF1Q13972 1273 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 PLEKHM2Q8IWE5 1019 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 MX1P20591 662 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 VPS37DQ86XT2 251 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 NIM1KQ8IY84 436 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 PI4K2BQ8TCG2 481 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 ZNF541Q9H0D2 1346 aa16.54■□□□□ 0.24
PTPN7-218ENST00000496197 AK9Q5TCS8 1911 aa16.53■□□□□ 0.24
PTPN7-218ENST00000496197 FZD9O00144 591 aa16.53■□□□□ 0.24
PTPN7-218ENST00000496197 PDE1AP54750 535 aa16.53■□□□□ 0.24
PTPN7-218ENST00000496197 TTC39AQ5SRH9 613 aa16.53■□□□□ 0.24
PTPN7-218ENST00000496197 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
PTPN7-218ENST00000496197 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
PTPN7-218ENST00000496197 HMG20BQ9P0W2 317 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms