RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 BECN1Q14457 450 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 BMP2KLQ5H9B9 411 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 ANKRD45Q5TZF3 282 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 DCAF15Q66K64 600 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 TBC1D22AQ8WUA7 517 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 SLC10A4Q96EP9 437 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 LNPKQ9C0E8 428 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 GBA2Q9HCG7 927 aaPredicted RBP10.37□□□□□ -0.75
VPS13B-206ENST00000496144 HMMRO75330 724 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 GNAI3P08754 354 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 MAP1SQ66K74 1059 aaPredicted RBP10.37□□□□□ -0.75
VPS13B-206ENST00000496144 CEP85Q6P2H3 762 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 ANKRD44Q8N8A2 993 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 LDHCP07864 332 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 LINS1Q8NG48 757 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 GPATCH3Q96I76 525 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 BIN2Q9UBW5 565 aaPredicted RBP10.37□□□□□ -0.75
VPS13B-206ENST00000496144 DCTPP1Q9H773 170 aa10.37□□□□□ -0.75
VPS13B-206ENST00000496144 AGBL3Q8NEM8 1001 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 TMEM106CQ9BVX2 250 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 PRAMEF22A3QJZ6 481 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 ALDH1A1P00352 501 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 SLC10A5Q5PT55 438 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 NTSR2O95665 410 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 G2E3Q7L622 706 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 RPAP2Q8IXW5 612 aaPredicted RBP10.36□□□□□ -0.75
VPS13B-206ENST00000496144 KIF3CO14782 793 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 DZIP1Q86YF9 867 aaKnown RBP10.36□□□□□ -0.75
VPS13B-206ENST00000496144 LY75O60449 1722 aa10.36□□□□□ -0.75
VPS13B-206ENST00000496144 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 F8W031 263 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-206ENST00000496144 ITGA6P23229 1130 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 KIAA2012Q0VF49 1180 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 NBPF10Q6P3W6 841 aaKnown RBP10.35□□□□□ -0.75
VPS13B-206ENST00000496144 NBPF15Q8N660 670 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 HOXA10P31260 410 aaPredicted RBP10.35□□□□□ -0.75
VPS13B-206ENST00000496144 CAPNS2Q96L46 248 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 C22orf23Q9BZE7 217 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 BCL2L12Q9HB09 334 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 MFAP1P55081 439 aaKnown RBP10.35□□□□□ -0.75
VPS13B-206ENST00000496144 LRRFIP1Q32MZ4 808 aaKnown RBP10.35□□□□□ -0.75
VPS13B-206ENST00000496144 TTLL5Q6EMB2 1281 aa10.35□□□□□ -0.75
VPS13B-206ENST00000496144 HSP90AB4PQ58FF6 505 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 CCDC158Q5M9N0 1113 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
VPS13B-206ENST00000496144 QSER1Q2KHR3 1735 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 ITGB4P16144 1822 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 FKBP1BP68106 108 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 DPF2Q92785 391 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 HOXD10P28358 340 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 HIBADHP31937 336 aaKnown RBP10.34□□□□□ -0.75
VPS13B-206ENST00000496144 ZNF804BA4D1E1 1349 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 NFKBIEO00221 500 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 DEKP35659 375 aaKnown RBP10.34□□□□□ -0.75
VPS13B-206ENST00000496144 RBM25P49756 843 aaKnown RBP10.34□□□□□ -0.75
VPS13B-206ENST00000496144 SF3B3Q15393 1217 aaKnown RBP10.34□□□□□ -0.75
VPS13B-206ENST00000496144 MEIS3Q99687 375 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 PICK1Q9NRD5 415 aa10.34□□□□□ -0.75
VPS13B-206ENST00000496144 WDR33Q9C0J8 1336 aaKnown RBP10.33□□□□□ -0.76
VPS13B-206ENST00000496144 GPSM2P81274 684 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-206ENST00000496144 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 GPRC5DQ9NZD1 345 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 TTC39AQ5SRH9 613 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 BSDC1Q9NW68 430 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-206ENST00000496144 GTF2IP78347 998 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 PLEKHM2Q8IWE5 1019 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 L3MBTL3Q96JM7 780 aaPredicted RBP10.33□□□□□ -0.76
VPS13B-206ENST00000496144 LRRFIP2Q9Y608 721 aaKnown RBP10.33□□□□□ -0.76
VPS13B-206ENST00000496144 MROH5Q6ZUA9 1318 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 PAPPAQ13219 1627 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 PSMD14O00487 310 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 MAP2K2P36507 400 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 PRKG1Q13976 671 aa10.33□□□□□ -0.76
VPS13B-206ENST00000496144 NFKBIBQ15653 356 aa10.32□□□□□ -0.76
VPS13B-206ENST00000496144 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
VPS13B-206ENST00000496144 GSPT1P15170 499 aaKnown RBP10.32□□□□□ -0.76
VPS13B-206ENST00000496144 TTC22Q5TAA0 569 aa10.32□□□□□ -0.76
VPS13B-206ENST00000496144 GRM8O00222 908 aa10.32□□□□□ -0.76
VPS13B-206ENST00000496144 CHD4Q14839 1912 aa10.32□□□□□ -0.76
VPS13B-206ENST00000496144 SCARF1Q14162 830 aa10.32□□□□□ -0.76
VPS13B-206ENST00000496144 RGMBQ6NW40 437 aa10.32□□□□□ -0.76
VPS13B-206ENST00000496144 ZNF541Q9H0D2 1346 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 F6X3S4 739 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 DGKZQ13574 1117 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 GCKRQ14397 625 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 PPP2R3BQ9Y5P8 575 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 CXCL9Q07325 125 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 PABPC4Q13310 644 aaKnown RBP eCLIP10.31□□□□□ -0.76
VPS13B-206ENST00000496144 WDR66Q8TBY9 1149 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 ISCA1Q9BUE6 129 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 ANTXR1Q9H6X2 564 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 ANGEL1Q9UNK9 670 aaKnown RBP10.31□□□□□ -0.76
VPS13B-206ENST00000496144 CDC45O75419 566 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 TBC1D9Q6ZT07 1266 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 JARID2Q92833 1246 aaPredicted RBP10.31□□□□□ -0.76
VPS13B-206ENST00000496144 SHANK3Q9BYB0 1731 aa10.31□□□□□ -0.76
VPS13B-206ENST00000496144 EPS15P42566 896 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms