RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 UFL1O94874 794 aa26.74■■□□□ 1.87
ECHDC3-205ENST00000496136 SNED1Q8TER0 1413 aa26.74■■□□□ 1.87
ECHDC3-205ENST00000496136 GRIPAP1Q4V328 841 aa26.74■■□□□ 1.87
ECHDC3-205ENST00000496136 C6orf229H3BNL8 230 aa26.73■■□□□ 1.87
ECHDC3-205ENST00000496136 MX1P20591 662 aa26.73■■□□□ 1.87
ECHDC3-205ENST00000496136 RGS3P49796 1198 aa26.73■■□□□ 1.87
ECHDC3-205ENST00000496136 CCDC93Q567U6 631 aa26.73■■□□□ 1.87
ECHDC3-205ENST00000496136 KLRK1P26718 216 aa26.72■■□□□ 1.87
ECHDC3-205ENST00000496136 SOGA3Q5TF21 947 aa26.72■■□□□ 1.87
ECHDC3-205ENST00000496136 RTKN2Q8IZC4 609 aa26.72■■□□□ 1.87
ECHDC3-205ENST00000496136 IRS2Q9Y4H2 1338 aa26.72■■□□□ 1.87
ECHDC3-205ENST00000496136 PDE1AP54750 535 aa26.71■■□□□ 1.87
ECHDC3-205ENST00000496136 TXNRD3Q86VQ6 643 aa26.71■■□□□ 1.87
ECHDC3-205ENST00000496136 STAP2Q9UGK3 403 aa26.71■■□□□ 1.87
ECHDC3-205ENST00000496136 GORABQ5T7V8 394 aa26.71■■□□□ 1.87
ECHDC3-205ENST00000496136 GPR101Q96P66 508 aaPredicted RBP26.71■■□□□ 1.87
ECHDC3-205ENST00000496136 RTFDC1Q9BY42 306 aaPredicted RBP26.71■■□□□ 1.87
ECHDC3-205ENST00000496136 C15orf52Q6ZUT6 534 aaKnown RBP26.7■■□□□ 1.86
ECHDC3-205ENST00000496136 FAM84BQ96KN1 310 aaPredicted RBP26.7■■□□□ 1.86
ECHDC3-205ENST00000496136 ECHDC1Q9NTX5 307 aa26.7■■□□□ 1.86
ECHDC3-205ENST00000496136 DUOX1Q9NRD9 1551 aa26.7■■□□□ 1.86
ECHDC3-205ENST00000496136 TSHZ3Q63HK5 1081 aa26.69■■□□□ 1.86
ECHDC3-205ENST00000496136 OSBPL3Q9H4L5 887 aa26.69■■□□□ 1.86
ECHDC3-205ENST00000496136 ARFGEF1Q9Y6D6 1849 aa26.69■■□□□ 1.86
ECHDC3-205ENST00000496136 GYG1P46976 350 aa26.69■■□□□ 1.86
ECHDC3-205ENST00000496136 BCAMP50895 628 aa26.69■■□□□ 1.86
ECHDC3-205ENST00000496136 CCDC102BQ68D86 513 aa26.69■■□□□ 1.86
ECHDC3-205ENST00000496136 TTC41PQ6P2S7 1318 aa26.68■■□□□ 1.86
ECHDC3-205ENST00000496136 ARAP2Q8WZ64 1704 aa26.68■■□□□ 1.86
ECHDC3-205ENST00000496136 CCDC158Q5M9N0 1113 aa26.68■■□□□ 1.86
ECHDC3-205ENST00000496136 CAVIN4Q5BKX8 364 aa26.67■■□□□ 1.86
ECHDC3-205ENST00000496136 FBXO33Q7Z6M2 555 aa26.67■■□□□ 1.86
ECHDC3-205ENST00000496136 GPATCH3Q96I76 525 aa26.67■■□□□ 1.86
ECHDC3-205ENST00000496136 PSMD1Q99460 953 aa26.67■■□□□ 1.86
ECHDC3-205ENST00000496136 PHKA1P46020 1223 aa26.66■■□□□ 1.86
ECHDC3-205ENST00000496136 WASHC4Q2M389 1173 aa26.66■■□□□ 1.86
ECHDC3-205ENST00000496136 ZC3H12CQ9C0D7 883 aaKnown RBP26.66■■□□□ 1.86
ECHDC3-205ENST00000496136 PI4K2BQ8TCG2 481 aa26.66■■□□□ 1.86
ECHDC3-205ENST00000496136 FER1L6Q2WGJ9 1857 aa26.65■■□□□ 1.86
ECHDC3-205ENST00000496136 MED23Q9ULK4 1368 aa26.65■■□□□ 1.86
ECHDC3-205ENST00000496136 RIMBP2O15034 1052 aa26.65■■□□□ 1.86
ECHDC3-205ENST00000496136 HIBADHP31937 336 aaKnown RBP26.65■■□□□ 1.86
ECHDC3-205ENST00000496136 SUPT20HQ8NEM7 779 aa26.65■■□□□ 1.86
ECHDC3-205ENST00000496136 EYA3Q99504 573 aa26.65■■□□□ 1.86
ECHDC3-205ENST00000496136 ATP5JP18859 108 aa26.64■■□□□ 1.86
ECHDC3-205ENST00000496136 TTC39AQ5SRH9 613 aa26.64■■□□□ 1.86
ECHDC3-205ENST00000496136 VPS37DQ86XT2 251 aa26.64■■□□□ 1.86
ECHDC3-205ENST00000496136 ERC2O15083 957 aa26.63■■□□□ 1.85
ECHDC3-205ENST00000496136 FKBP4Q02790 459 aaKnown RBP eCLIP26.63■■□□□ 1.85
ECHDC3-205ENST00000496136 ZNF512BQ96KM6 892 aaPredicted RBP26.63■■□□□ 1.85
ECHDC3-205ENST00000496136 AOX1Q06278 1338 aa26.63■■□□□ 1.85
ECHDC3-205ENST00000496136 GLRX3O76003 335 aaKnown RBP26.62■■□□□ 1.85
ECHDC3-205ENST00000496136 ARID4AP29374 1257 aaPredicted RBP26.62■■□□□ 1.85
ECHDC3-205ENST00000496136 BOLA2Q9H3K6 86 aa26.62■■□□□ 1.85
ECHDC3-205ENST00000496136 NFKBIEO00221 500 aa26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 YBX3P16989 372 aaKnown RBP eCLIP26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 ZNF804AQ7Z570 1209 aa26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 UQCRFS1P1P0C7P4 283 aa26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 KIAA2012Q0VF49 1180 aa26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 SCARF1Q14162 830 aa26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 TAOK3Q9H2K8 898 aa26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 GNL3LQ9NVN8 582 aaKnown RBP26.61■■□□□ 1.85
ECHDC3-205ENST00000496136 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
ECHDC3-205ENST00000496136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.6■■□□□ 1.85
ECHDC3-205ENST00000496136 CD209Q9NNX6 404 aa26.6■■□□□ 1.85
ECHDC3-205ENST00000496136 ZNF277Q9NRM2 450 aaPredicted RBP26.6■■□□□ 1.85
ECHDC3-205ENST00000496136 IQSEC3Q9UPP2 1182 aaPredicted RBP26.6■■□□□ 1.85
ECHDC3-205ENST00000496136 MCAMP43121 646 aa26.59■■□□□ 1.85
ECHDC3-205ENST00000496136 AOC3Q16853 763 aa26.59■■□□□ 1.85
ECHDC3-205ENST00000496136 TTC22Q5TAA0 569 aa26.59■■□□□ 1.85
ECHDC3-205ENST00000496136 VPS33BQ9H267 617 aa26.59■■□□□ 1.85
ECHDC3-205ENST00000496136 AKAP11Q9UKA4 1901 aa26.59■■□□□ 1.85
ECHDC3-205ENST00000496136 RASGRF1Q13972 1273 aa26.58■■□□□ 1.85
ECHDC3-205ENST00000496136 TDRD7Q8NHU6 1098 aaKnown RBP26.58■■□□□ 1.85
ECHDC3-205ENST00000496136 COA1Q9GZY4 146 aa26.58■■□□□ 1.85
ECHDC3-205ENST00000496136 LTBP3Q9NS15 1303 aa26.58■■□□□ 1.85
ECHDC3-205ENST00000496136 PPIP5K2O43314 1243 aa26.58■■□□□ 1.85
ECHDC3-205ENST00000496136 DOK7Q18PE1 504 aa26.58■■□□□ 1.85
ECHDC3-205ENST00000496136 ARHGAP27Q6ZUM4 889 aa26.58■■□□□ 1.85
ECHDC3-205ENST00000496136 IL1R1P14778 569 aa26.57■■□□□ 1.84
ECHDC3-205ENST00000496136 GSPT1P15170 499 aaKnown RBP26.57■■□□□ 1.84
ECHDC3-205ENST00000496136 PI16Q6UXB8 463 aa26.57■■□□□ 1.84
ECHDC3-205ENST00000496136 HAUS7Q99871 368 aa26.57■■□□□ 1.84
ECHDC3-205ENST00000496136 SNRKQ9NRH2 765 aa26.57■■□□□ 1.84
ECHDC3-205ENST00000496136 HMG20BQ9P0W2 317 aa26.57■■□□□ 1.84
ECHDC3-205ENST00000496136 NDUFB9Q9Y6M9 179 aa26.57■■□□□ 1.84
ECHDC3-205ENST00000496136 UTRNP46939 3433 aa26.56■■□□□ 1.84
ECHDC3-205ENST00000496136 CHD4Q14839 1912 aa26.56■■□□□ 1.84
ECHDC3-205ENST00000496136 G3V3G9 751 aa26.56■■□□□ 1.84
ECHDC3-205ENST00000496136 ZBTB22O15209 634 aa26.56■■□□□ 1.84
ECHDC3-205ENST00000496136 FRAT2O75474 233 aaPredicted RBP26.56■■□□□ 1.84
ECHDC3-205ENST00000496136 DCAF8Q5TAQ9 597 aa26.56■■□□□ 1.84
ECHDC3-205ENST00000496136 SPATA5Q8NB90 893 aa26.56■■□□□ 1.84
ECHDC3-205ENST00000496136 SEMA3EO15041 775 aa26.55■■□□□ 1.84
ECHDC3-205ENST00000496136 MAP4K4O95819 1239 aaPredicted RBP26.55■■□□□ 1.84
ECHDC3-205ENST00000496136 IARSP41252 1262 aaKnown RBP26.55■■□□□ 1.84
ECHDC3-205ENST00000496136 RASSF7Q02833 373 aa26.55■■□□□ 1.84
ECHDC3-205ENST00000496136 LARGE2Q8N3Y3 721 aa26.55■■□□□ 1.84
ECHDC3-205ENST00000496136 DBNDD1Q9H9R9 158 aa26.55■■□□□ 1.84
ECHDC3-205ENST00000496136 ZAP70P43403 619 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms