RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 FGFR2P21802 821 aa19.05■□□□□ 0.64
RAPGEF3-215ENST00000495953 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
RAPGEF3-215ENST00000495953 ZBTB47Q9UFB7 747 aaPredicted RBP19.05■□□□□ 0.64
RAPGEF3-215ENST00000495953 ARAP2Q8WZ64 1704 aa19.05■□□□□ 0.64
RAPGEF3-215ENST00000495953 MED23Q9ULK4 1368 aa19.05■□□□□ 0.64
RAPGEF3-215ENST00000495953 SLC5A1P13866 664 aa19.04■□□□□ 0.64
RAPGEF3-215ENST00000495953 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
RAPGEF3-215ENST00000495953 WASHC4Q2M389 1173 aa19.04■□□□□ 0.64
RAPGEF3-215ENST00000495953 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
RAPGEF3-215ENST00000495953 KIF3CO14782 793 aa19.03■□□□□ 0.64
RAPGEF3-215ENST00000495953 TNNI3KQ59H18 835 aa19.03■□□□□ 0.64
RAPGEF3-215ENST00000495953 ZC3H12CQ9C0D7 883 aaKnown RBP19.03■□□□□ 0.64
RAPGEF3-215ENST00000495953 FPGT-TNNI3KV9GXZ4 949 aa19.03■□□□□ 0.64
RAPGEF3-215ENST00000495953 ZNF609O15014 1411 aa19.02■□□□□ 0.64
RAPGEF3-215ENST00000495953 APBB1O00213 710 aa19.02■□□□□ 0.64
RAPGEF3-215ENST00000495953 KIAA2012Q0VF49 1180 aa19.02■□□□□ 0.64
RAPGEF3-215ENST00000495953 CENPQQ7L2Z9 268 aaPredicted RBP19.02■□□□□ 0.64
RAPGEF3-215ENST00000495953 A0A1B0GUL7 405 aa19.01■□□□□ 0.63
RAPGEF3-215ENST00000495953 IRS2Q9Y4H2 1338 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 LMNB1P20700 586 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 IARSP41252 1262 aaKnown RBP19■□□□□ 0.63
RAPGEF3-215ENST00000495953 TIMM10P62072 90 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 CAVIN4Q5BKX8 364 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 ANKRD45Q5TZF3 282 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 NEUROD6Q96NK8 337 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 IL1RAPL2Q9NP60 686 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 NMRK2Q9NPI5 230 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
RAPGEF3-215ENST00000495953 SNAP23O00161 211 aa18.99■□□□□ 0.63
RAPGEF3-215ENST00000495953 PPIP5K2O43314 1243 aa18.99■□□□□ 0.63
RAPGEF3-215ENST00000495953 ZNF804AQ7Z570 1209 aa18.99■□□□□ 0.63
RAPGEF3-215ENST00000495953 EAF2Q96CJ1 260 aaPredicted RBP18.99■□□□□ 0.63
RAPGEF3-215ENST00000495953 ZNF277Q9NRM2 450 aaPredicted RBP18.99■□□□□ 0.63
RAPGEF3-215ENST00000495953 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.99■□□□□ 0.63
RAPGEF3-215ENST00000495953 WTIPA6NIX2 430 aaPredicted RBP18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 RIMBP2O15034 1052 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 ZBTB22O15209 634 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 IFIT2P09913 472 aaKnown RBP18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 NUCB1Q02818 461 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 AOC3Q16853 763 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 FBXO33Q7Z6M2 555 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 AACSQ86V21 672 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 LARGE2Q8N3Y3 721 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 XAGE2Q96GT9 111 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 COA1Q9GZY4 146 aa18.98■□□□□ 0.63
RAPGEF3-215ENST00000495953 G3V3G9 751 aa18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 SMARCA5O60264 1052 aaPredicted RBP18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 HSPA6P17066 643 aa18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 HIBADHP31937 336 aaKnown RBP18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 GORABQ5T7V8 394 aa18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 DCAF8Q5TAQ9 597 aa18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 TXNRD3Q86VQ6 643 aa18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 JDP2Q8WYK2 163 aa18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 FAM84BQ96KN1 310 aaPredicted RBP18.97■□□□□ 0.63
RAPGEF3-215ENST00000495953 COL4A5P29400 1685 aa18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 CCDC158Q5M9N0 1113 aa18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 B4GALNT3Q6L9W6 998 aa18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 PODNQ7Z5L7 613 aa18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 CHD1LQ86WJ1 897 aa18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 NIM1KQ8IY84 436 aa18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 GPR101Q96P66 508 aaPredicted RBP18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 GNL3LQ9NVN8 582 aaKnown RBP18.96■□□□□ 0.63
RAPGEF3-215ENST00000495953 IL1R1P14778 569 aa18.95■□□□□ 0.62
RAPGEF3-215ENST00000495953 KLRK1P26718 216 aa18.95■□□□□ 0.62
RAPGEF3-215ENST00000495953 CCDC8Q9H0W5 538 aaPredicted RBP18.95■□□□□ 0.62
RAPGEF3-215ENST00000495953 CD209Q9NNX6 404 aa18.95■□□□□ 0.62
RAPGEF3-215ENST00000495953 DBNLQ9UJU6 430 aaKnown RBP18.95■□□□□ 0.62
RAPGEF3-215ENST00000495953 MYH13Q9UKX3 1938 aa18.95■□□□□ 0.62
RAPGEF3-215ENST00000495953 SEMA3EO15041 775 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 TOMM70O94826 608 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 UQCRFS1P1P0C7P4 283 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 ADORA1P30542 326 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 GYG1P46976 350 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 BCAMP50895 628 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 GPATCH3Q96I76 525 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 ZNF512BQ96KM6 892 aaPredicted RBP18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 DBNDD2Q9BQY9 259 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 ZNRF3Q9ULT6 936 aa18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 ZC3H4Q9UPT8 1303 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-215ENST00000495953 PSME4Q14997 1843 aa18.93■□□□□ 0.62
RAPGEF3-215ENST00000495953 ECE2O60344 883 aa18.93■□□□□ 0.62
RAPGEF3-215ENST00000495953 TDRD7Q8NHU6 1098 aaKnown RBP18.93■□□□□ 0.62
RAPGEF3-215ENST00000495953 ARID4AP29374 1257 aaPredicted RBP18.92■□□□□ 0.62
RAPGEF3-215ENST00000495953 DOK7Q18PE1 504 aa18.92■□□□□ 0.62
RAPGEF3-215ENST00000495953 TTC39AQ5SRH9 613 aa18.92■□□□□ 0.62
RAPGEF3-215ENST00000495953 LNPKQ9C0E8 428 aa18.92■□□□□ 0.62
RAPGEF3-215ENST00000495953 DBNDD1Q9H9R9 158 aa18.92■□□□□ 0.62
RAPGEF3-215ENST00000495953 FZD9O00144 591 aa18.91■□□□□ 0.62
RAPGEF3-215ENST00000495953 PHKA1P46020 1223 aa18.91■□□□□ 0.62
RAPGEF3-215ENST00000495953 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.91■□□□□ 0.62
RAPGEF3-215ENST00000495953 TLR7Q9NYK1 1049 aaKnown RBP18.91■□□□□ 0.62
RAPGEF3-215ENST00000495953 DENND2AQ9ULE3 1009 aa18.91■□□□□ 0.62
RAPGEF3-215ENST00000495953 TTC41PQ6P2S7 1318 aa18.91■□□□□ 0.62
RAPGEF3-215ENST00000495953 FRAT2O75474 233 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF3-215ENST00000495953 RRAGCQ9HB90 399 aa18.9■□□□□ 0.62
RAPGEF3-215ENST00000495953 ECHDC1Q9NTX5 307 aa18.9■□□□□ 0.62
RAPGEF3-215ENST00000495953 PDS5AQ29RF7 1337 aaKnown RBP18.9■□□□□ 0.62
RAPGEF3-215ENST00000495953 ERC2O15083 957 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms