RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
TFE3-205ENST00000495940 TRIOBPQ9H2D6 2365 aa17.23■□□□□ 0.35
TFE3-205ENST00000495940 E9PSI1 815 aa17.22■□□□□ 0.35
TFE3-205ENST00000495940 G3V3G9 751 aa17.22■□□□□ 0.35
TFE3-205ENST00000495940 PTPN12Q05209 780 aaKnown RBP17.22■□□□□ 0.35
TFE3-205ENST00000495940 SF3B3Q15393 1217 aaKnown RBP17.22■□□□□ 0.35
TFE3-205ENST00000495940 DCAF8Q5TAQ9 597 aa17.22■□□□□ 0.35
TFE3-205ENST00000495940 USP17L8P0C7I0 530 aa17.21■□□□□ 0.35
TFE3-205ENST00000495940 SLFN5Q08AF3 891 aa17.21■□□□□ 0.35
TFE3-205ENST00000495940 NFE2L2Q16236 605 aa17.21■□□□□ 0.35
TFE3-205ENST00000495940 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
TFE3-205ENST00000495940 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.21■□□□□ 0.35
TFE3-205ENST00000495940 FZD1Q9UP38 647 aa17.21■□□□□ 0.35
TFE3-205ENST00000495940 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
TFE3-205ENST00000495940 CENPQQ7L2Z9 268 aaPredicted RBP17.2■□□□□ 0.34
TFE3-205ENST00000495940 CD99L2Q8TCZ2 262 aa17.2■□□□□ 0.34
TFE3-205ENST00000495940 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
TFE3-205ENST00000495940 ATP5J2-PTCD1G3V325 749 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 CAP1Q01518 475 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 SPRYD7Q5W111 196 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 PLEKHF1Q96S99 279 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 SEC31BQ9NQW1 1179 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 ANKIB1Q9P2G1 1089 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 GGA1Q9UJY5 639 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 ZSWIM8A7E2V4 1837 aa17.19■□□□□ 0.34
TFE3-205ENST00000495940 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
TFE3-205ENST00000495940 SASH1O94885 1247 aa17.18■□□□□ 0.34
TFE3-205ENST00000495940 NEFMP07197 916 aa17.18■□□□□ 0.34
TFE3-205ENST00000495940 NF2P35240 595 aa17.18■□□□□ 0.34
TFE3-205ENST00000495940 RPS8P62241 208 aaKnown RBP17.18■□□□□ 0.34
TFE3-205ENST00000495940 ARMC5Q96C12 935 aa17.18■□□□□ 0.34
TFE3-205ENST00000495940 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
TFE3-205ENST00000495940 OTOFQ9HC10 1997 aa17.18■□□□□ 0.34
TFE3-205ENST00000495940 SSC5DA1L4H1 1573 aa17.18■□□□□ 0.34
TFE3-205ENST00000495940 CEP290O15078 2479 aa17.17■□□□□ 0.34
TFE3-205ENST00000495940 KRT24Q2M2I5 525 aa17.17■□□□□ 0.34
TFE3-205ENST00000495940 IFNL1Q8IU54 200 aa17.17■□□□□ 0.34
TFE3-205ENST00000495940 DDRGK1Q96HY6 314 aa17.17■□□□□ 0.34
TFE3-205ENST00000495940 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
TFE3-205ENST00000495940 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
TFE3-205ENST00000495940 ECM29Q5VYK3 1845 aa17.17■□□□□ 0.34
TFE3-205ENST00000495940 USP17L3A6NCW0 530 aa17.16■□□□□ 0.34
TFE3-205ENST00000495940 USP17L4A6NCW7 530 aa17.16■□□□□ 0.34
TFE3-205ENST00000495940 WNT10BO00744 389 aa17.16■□□□□ 0.34
TFE3-205ENST00000495940 IRS4O14654 1257 aaPredicted RBP17.16■□□□□ 0.34
TFE3-205ENST00000495940 USP17L1Q7RTZ2 530 aa17.16■□□□□ 0.34
TFE3-205ENST00000495940 ARMC9Q7Z3E5 817 aa17.16■□□□□ 0.34
TFE3-205ENST00000495940 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
TFE3-205ENST00000495940 ANGEL1Q9UNK9 670 aaKnown RBP17.16■□□□□ 0.34
TFE3-205ENST00000495940 COL6A3P12111 3177 aa17.16■□□□□ 0.34
TFE3-205ENST00000495940 RANBP2P49792 3224 aaKnown RBP17.15■□□□□ 0.34
TFE3-205ENST00000495940 WTIPA6NIX2 430 aaPredicted RBP17.15■□□□□ 0.34
TFE3-205ENST00000495940 H0YGN5 161 aa17.15■□□□□ 0.34
TFE3-205ENST00000495940 DLL1O00548 723 aa17.15■□□□□ 0.34
TFE3-205ENST00000495940 ALDH1A1P00352 501 aa17.15■□□□□ 0.34
TFE3-205ENST00000495940 LDLRAD1Q5T700 205 aa17.15■□□□□ 0.34
TFE3-205ENST00000495940 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
TFE3-205ENST00000495940 MANSC4A6NHS7 340 aaPredicted RBP17.14■□□□□ 0.33
TFE3-205ENST00000495940 CRHR2Q13324 411 aa17.14■□□□□ 0.33
TFE3-205ENST00000495940 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
TFE3-205ENST00000495940 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
TFE3-205ENST00000495940 OTUD5Q96G74 571 aa17.14■□□□□ 0.33
TFE3-205ENST00000495940 ERO1AQ96HE7 468 aa17.14■□□□□ 0.33
TFE3-205ENST00000495940 CLMNQ96JQ2 1002 aa17.14■□□□□ 0.33
TFE3-205ENST00000495940 PDE4AP27815 886 aa17.13■□□□□ 0.33
TFE3-205ENST00000495940 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
TFE3-205ENST00000495940 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
TFE3-205ENST00000495940 ZNF333Q96JL9 665 aa17.13■□□□□ 0.33
TFE3-205ENST00000495940 CCDC85AQ96PX6 553 aaPredicted RBP17.13■□□□□ 0.33
TFE3-205ENST00000495940 EFCC1Q9HA90 598 aa17.13■□□□□ 0.33
TFE3-205ENST00000495940 DACT2Q5SW24 774 aa17.12■□□□□ 0.33
TFE3-205ENST00000495940 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
TFE3-205ENST00000495940 WNK4Q96J92 1243 aa17.12■□□□□ 0.33
TFE3-205ENST00000495940 CRBNQ96SW2 442 aa17.12■□□□□ 0.33
TFE3-205ENST00000495940 SALL2Q9Y467 1007 aaPredicted RBP17.12■□□□□ 0.33
TFE3-205ENST00000495940 XDHP47989 1333 aa17.12■□□□□ 0.33
TFE3-205ENST00000495940 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
TFE3-205ENST00000495940 MYCP01106 439 aaPredicted RBP17.11■□□□□ 0.33
TFE3-205ENST00000495940 WDR63Q8IWG1 891 aa17.11■□□□□ 0.33
TFE3-205ENST00000495940 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
TFE3-205ENST00000495940 COL1A1P02452 1464 aaPredicted RBP17.11■□□□□ 0.33
TFE3-205ENST00000495940 MYH3P11055 1940 aa17.1■□□□□ 0.33
TFE3-205ENST00000495940 CT47B1P0C2W7 299 aaPredicted RBP17.1■□□□□ 0.33
TFE3-205ENST00000495940 ANKRD13DQ6ZTN6 518 aa17.1■□□□□ 0.33
TFE3-205ENST00000495940 PODNQ7Z5L7 613 aa17.1■□□□□ 0.33
TFE3-205ENST00000495940 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
TFE3-205ENST00000495940 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
TFE3-205ENST00000495940 PTCH2Q9Y6C5 1203 aa17.1■□□□□ 0.33
TFE3-205ENST00000495940 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
TFE3-205ENST00000495940 GJA5P36382 358 aa17.09■□□□□ 0.33
TFE3-205ENST00000495940 OGFOD1Q8N543 542 aa17.09■□□□□ 0.33
TFE3-205ENST00000495940 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
TFE3-205ENST00000495940 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
TFE3-205ENST00000495940 ZBTB48P10074 688 aaPredicted RBP17.08■□□□□ 0.32
TFE3-205ENST00000495940 INHBEP58166 350 aa17.08■□□□□ 0.32
TFE3-205ENST00000495940 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
TFE3-205ENST00000495940 RBM27Q9P2N5 1060 aaKnown RBP17.08■□□□□ 0.32
TFE3-205ENST00000495940 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms