RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 NBPF7P0C2Y1 421 aaPredicted RBP30.56■■■□□ 2.48
HLA-C-209ENST00000495835 USP17L8P0C7I0 530 aa30.56■■■□□ 2.48
HLA-C-209ENST00000495835 HSPA1AP0DMV8 641 aaKnown RBP30.56■■■□□ 2.48
HLA-C-209ENST00000495835 HSPA1BP0DMV9 641 aaKnown RBP30.56■■■□□ 2.48
HLA-C-209ENST00000495835 BRPF1P55201 1214 aaPredicted RBP30.56■■■□□ 2.48
HLA-C-209ENST00000495835 FMR1Q06787 632 aaKnown RBP eCLIP30.56■■■□□ 2.48
HLA-C-209ENST00000495835 TAF7LQ5H9L4 462 aa30.56■■■□□ 2.48
HLA-C-209ENST00000495835 LDHAL6AQ6ZMR3 332 aa30.56■■■□□ 2.48
HLA-C-209ENST00000495835 DCPSQ96C86 337 aaKnown RBP30.56■■■□□ 2.48
HLA-C-209ENST00000495835 TLL2Q9Y6L7 1015 aa30.56■■■□□ 2.48
HLA-C-209ENST00000495835 TXNRD3Q86VQ6 643 aa30.55■■■□□ 2.48
HLA-C-209ENST00000495835 SUCLG2Q96I99 432 aa30.55■■■□□ 2.48
HLA-C-209ENST00000495835 SMC4Q9NTJ3 1288 aa30.55■■■□□ 2.48
HLA-C-209ENST00000495835 EGFRP00533 1210 aa30.54■■■□□ 2.48
HLA-C-209ENST00000495835 DACT2Q5SW24 774 aa30.54■■■□□ 2.48
HLA-C-209ENST00000495835 RBM26Q5T8P6 1007 aaKnown RBP30.54■■■□□ 2.48
HLA-C-209ENST00000495835 KAZALD1Q96I82 304 aa30.54■■■□□ 2.48
HLA-C-209ENST00000495835 HHIPL1Q96JK4 782 aa30.54■■■□□ 2.48
HLA-C-209ENST00000495835 POLR2AP24928 1970 aaKnown RBP30.54■■■□□ 2.48
HLA-C-209ENST00000495835 CELF2O95319 508 aaKnown RBP30.53■■■□□ 2.48
HLA-C-209ENST00000495835 ECE1P42892 770 aa30.53■■■□□ 2.48
HLA-C-209ENST00000495835 RABL6Q3YEC7 729 aaPredicted RBP30.53■■■□□ 2.48
HLA-C-209ENST00000495835 A0A1B0GUL6 1792 aa30.53■■■□□ 2.48
HLA-C-209ENST00000495835 KRT26Q7Z3Y9 468 aa30.52■■■□□ 2.48
HLA-C-209ENST00000495835 USP48Q86UV5 1035 aa30.52■■■□□ 2.48
HLA-C-209ENST00000495835 CNNM1Q9NRU3 951 aa30.52■■■□□ 2.48
HLA-C-209ENST00000495835 WDR33Q9C0J8 1336 aaKnown RBP30.51■■■□□ 2.48
HLA-C-209ENST00000495835 TTLL5Q6EMB2 1281 aa30.51■■■□□ 2.47
HLA-C-209ENST00000495835 MYOZ2Q9NPC6 264 aa30.51■■■□□ 2.47
HLA-C-209ENST00000495835 ZNF646O15015 1829 aaPredicted RBP30.51■■■□□ 2.47
HLA-C-209ENST00000495835 IRS2Q9Y4H2 1338 aa30.5■■■□□ 2.47
HLA-C-209ENST00000495835 TAF5LO75529 589 aa30.5■■■□□ 2.47
HLA-C-209ENST00000495835 SAPCD2Q86UD0 394 aa30.5■■■□□ 2.47
HLA-C-209ENST00000495835 OGFOD1Q8N543 542 aa30.5■■■□□ 2.47
HLA-C-209ENST00000495835 ZNF594Q96JF6 807 aaPredicted RBP30.5■■■□□ 2.47
HLA-C-209ENST00000495835 USP44Q9H0E7 712 aa30.5■■■□□ 2.47
HLA-C-209ENST00000495835 CD209Q9NNX6 404 aa30.5■■■□□ 2.47
HLA-C-209ENST00000495835 KLRK1P26718 216 aa30.48■■■□□ 2.47
HLA-C-209ENST00000495835 IFFO2Q5TF58 517 aa30.48■■■□□ 2.47
HLA-C-209ENST00000495835 DIEXFQ68CQ4 756 aaKnown RBP30.48■■■□□ 2.47
HLA-C-209ENST00000495835 ZNF804AQ7Z570 1209 aa30.48■■■□□ 2.47
HLA-C-209ENST00000495835 SULF1Q8IWU6 871 aa30.48■■■□□ 2.47
HLA-C-209ENST00000495835 HELBQ8NG08 1087 aaPredicted RBP30.48■■■□□ 2.47
HLA-C-209ENST00000495835 BICC1Q9H694 974 aaKnown RBP30.48■■■□□ 2.47
HLA-C-209ENST00000495835 PITPNM2Q9BZ72 1349 aa30.47■■■□□ 2.47
HLA-C-209ENST00000495835 UBE4AQ14139 1066 aa30.47■■■□□ 2.47
HLA-C-209ENST00000495835 SCARF1Q14162 830 aa30.47■■■□□ 2.47
HLA-C-209ENST00000495835 IL1R1P14778 569 aa30.46■■■□□ 2.47
HLA-C-209ENST00000495835 MAP2K1Q02750 393 aaPredicted RBP30.46■■■□□ 2.47
HLA-C-209ENST00000495835 CAPNS2Q96L46 248 aa30.46■■■□□ 2.47
HLA-C-209ENST00000495835 API5Q9BZZ5 524 aaKnown RBP30.46■■■□□ 2.47
HLA-C-209ENST00000495835 WBP1LQ9NX94 342 aa30.46■■■□□ 2.47
HLA-C-209ENST00000495835 GGA3Q9NZ52 723 aa30.46■■■□□ 2.47
HLA-C-209ENST00000495835 MROH5Q6ZUA9 1318 aa30.45■■■□□ 2.46
HLA-C-209ENST00000495835 GTF2IP78347 998 aa30.44■■■□□ 2.46
HLA-C-209ENST00000495835 ANKRD44Q8N8A2 993 aa30.44■■■□□ 2.46
HLA-C-209ENST00000495835 FBXW7Q969H0 707 aa30.44■■■□□ 2.46
HLA-C-209ENST00000495835 AIDAQ96BJ3 306 aa30.44■■■□□ 2.46
HLA-C-209ENST00000495835 ZNF408Q9H9D4 720 aa30.44■■■□□ 2.46
HLA-C-209ENST00000495835 RIPOR2Q9Y4F9 1068 aa30.44■■■□□ 2.46
HLA-C-209ENST00000495835 THSD7BQ9C0I4 1608 aa30.44■■■□□ 2.46
HLA-C-209ENST00000495835 SNAP23O00161 211 aa30.43■■■□□ 2.46
HLA-C-209ENST00000495835 MAP2K2P36507 400 aa30.43■■■□□ 2.46
HLA-C-209ENST00000495835 RARSP54136 660 aaKnown RBP30.43■■■□□ 2.46
HLA-C-209ENST00000495835 FKBP1AP62942 108 aaKnown RBP30.43■■■□□ 2.46
HLA-C-209ENST00000495835 ARHGAP45Q92619 1136 aa30.43■■■□□ 2.46
HLA-C-209ENST00000495835 HDAC9Q9UKV0 1011 aa30.43■■■□□ 2.46
HLA-C-209ENST00000495835 NOB1Q9ULX3 412 aaKnown RBP30.43■■■□□ 2.46
HLA-C-209ENST00000495835 HDAC5Q9UQL6 1122 aa30.43■■■□□ 2.46
HLA-C-209ENST00000495835 PLIN1O60240 522 aa30.42■■■□□ 2.46
HLA-C-209ENST00000495835 ANGEL2Q5VTE6 544 aaKnown RBP30.42■■■□□ 2.46
HLA-C-209ENST00000495835 CYP4F22Q6NT55 531 aa30.42■■■□□ 2.46
HLA-C-209ENST00000495835 PAXIP1Q6ZW49 1069 aaPredicted RBP30.42■■■□□ 2.46
HLA-C-209ENST00000495835 MIER1Q8N108 512 aa30.41■■■□□ 2.46
HLA-C-209ENST00000495835 C2orf69Q8N8R5 385 aa30.41■■■□□ 2.46
HLA-C-209ENST00000495835 KIF16BQ96L93 1317 aa30.41■■■□□ 2.46
HLA-C-209ENST00000495835 ADM5C9JUS6 153 aa30.4■■■□□ 2.46
HLA-C-209ENST00000495835 COL13A1Q5TAT6 717 aaPredicted RBP30.4■■■□□ 2.46
HLA-C-209ENST00000495835 MXD3Q9BW11 206 aa30.4■■■□□ 2.46
HLA-C-209ENST00000495835 PUS3Q9BZE2 481 aaKnown RBP30.4■■■□□ 2.46
HLA-C-209ENST00000495835 GBA2Q9HCG7 927 aaPredicted RBP30.4■■■□□ 2.46
HLA-C-209ENST00000495835 ASTN2O75129 1339 aaPredicted RBP30.39■■■□□ 2.46
HLA-C-209ENST00000495835 WNT10BO00744 389 aa30.38■■■□□ 2.45
HLA-C-209ENST00000495835 FOXN1O15353 648 aa30.38■■■□□ 2.45
HLA-C-209ENST00000495835 SASH1O94885 1247 aa30.38■■■□□ 2.45
HLA-C-209ENST00000495835 CTCFP49711 727 aaPredicted RBP30.38■■■□□ 2.45
HLA-C-209ENST00000495835 HUNKP57058 714 aa30.37■■■□□ 2.45
HLA-C-209ENST00000495835 NBPF9Q3BBW0 867 aa30.37■■■□□ 2.45
HLA-C-209ENST00000495835 FKBP1BP68106 108 aa30.36■■■□□ 2.45
HLA-C-209ENST00000495835 DLK2Q6UY11 383 aa30.36■■■□□ 2.45
HLA-C-209ENST00000495835 KIAA0825Q8IV33 1275 aa30.36■■■□□ 2.45
HLA-C-209ENST00000495835 CDCA5Q96FF9 252 aa30.36■■■□□ 2.45
HLA-C-209ENST00000495835 PRDM10Q9NQV6 1147 aa30.36■■■□□ 2.45
HLA-C-209ENST00000495835 UBTFL1P0CB47 393 aaPredicted RBP30.35■■■□□ 2.45
HLA-C-209ENST00000495835 HIBADHP31937 336 aaKnown RBP30.35■■■□□ 2.45
HLA-C-209ENST00000495835 MTMR14Q8NCE2 650 aa30.35■■■□□ 2.45
HLA-C-209ENST00000495835 TDRD7Q8NHU6 1098 aaKnown RBP30.35■■■□□ 2.45
HLA-C-209ENST00000495835 ZBED3Q96IU2 234 aaPredicted RBP30.35■■■□□ 2.45
HLA-C-209ENST00000495835 FAM205AQ6ZU69 1335 aa30.35■■■□□ 2.45
HLA-C-209ENST00000495835 IPO8O15397 1037 aaKnown RBP30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms