RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 ANKRD2Q9GZV1 360 aa23.45■■□□□ 1.34
CLCNKA-207ENST00000495784 GBA2Q9HCG7 927 aaPredicted RBP23.45■■□□□ 1.34
CLCNKA-207ENST00000495784 LEMD3Q9Y2U8 911 aa23.45■■□□□ 1.34
CLCNKA-207ENST00000495784 SPEF2Q9C093 1822 aa23.45■■□□□ 1.34
CLCNKA-207ENST00000495784 ASTN2O75129 1339 aaPredicted RBP23.44■■□□□ 1.34
CLCNKA-207ENST00000495784 CSF1RP07333 972 aa23.44■■□□□ 1.34
CLCNKA-207ENST00000495784 SCARF1Q14162 830 aa23.44■■□□□ 1.34
CLCNKA-207ENST00000495784 FBXW7Q969H0 707 aa23.44■■□□□ 1.34
CLCNKA-207ENST00000495784 GMLQ99445 158 aa23.44■■□□□ 1.34
CLCNKA-207ENST00000495784 SPINK5Q9NQ38 1064 aaPredicted RBP23.44■■□□□ 1.34
CLCNKA-207ENST00000495784 F6X3S4 739 aa23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 CA12O43570 354 aa23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 BRPF1P55201 1214 aaPredicted RBP23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 NOGQ13253 232 aa23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 ANGEL2Q5VTE6 544 aaKnown RBP23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 COA1Q9GZY4 146 aa23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 MYOZ2Q9NPC6 264 aa23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 CACNA1FO60840 1977 aa23.43■■□□□ 1.34
CLCNKA-207ENST00000495784 ZNF804BA4D1E1 1349 aa23.42■■□□□ 1.34
CLCNKA-207ENST00000495784 ANKRD18BA2A2Z9 1011 aa23.42■■□□□ 1.34
CLCNKA-207ENST00000495784 KCNJ4P48050 445 aa23.42■■□□□ 1.34
CLCNKA-207ENST00000495784 TSKSQ9UJT2 592 aa23.42■■□□□ 1.34
CLCNKA-207ENST00000495784 PSME4Q14997 1843 aa23.41■■□□□ 1.34
CLCNKA-207ENST00000495784 RGMBQ6NW40 437 aa23.41■■□□□ 1.34
CLCNKA-207ENST00000495784 CDCA5Q96FF9 252 aa23.41■■□□□ 1.34
CLCNKA-207ENST00000495784 DACT2Q5SW24 774 aa23.4■■□□□ 1.34
CLCNKA-207ENST00000495784 BEND3Q5T5X7 828 aa23.4■■□□□ 1.34
CLCNKA-207ENST00000495784 STRIP1Q5VSL9 837 aa23.4■■□□□ 1.34
CLCNKA-207ENST00000495784 TXNRD3Q86VQ6 643 aa23.4■■□□□ 1.34
CLCNKA-207ENST00000495784 OGFOD1Q8N543 542 aa23.4■■□□□ 1.34
CLCNKA-207ENST00000495784 CHMP3Q9Y3E7 222 aa23.4■■□□□ 1.34
CLCNKA-207ENST00000495784 POLR2AP24928 1970 aaKnown RBP23.4■■□□□ 1.34
CLCNKA-207ENST00000495784 MYO3BQ8WXR4 1341 aa23.39■■□□□ 1.34
CLCNKA-207ENST00000495784 CHRNDQ07001 517 aa23.39■■□□□ 1.33
CLCNKA-207ENST00000495784 IFIT5Q13325 482 aaKnown RBP23.39■■□□□ 1.33
CLCNKA-207ENST00000495784 MXD3Q9BW11 206 aa23.39■■□□□ 1.33
CLCNKA-207ENST00000495784 PITPNM2Q9BZ72 1349 aa23.38■■□□□ 1.33
CLCNKA-207ENST00000495784 KLRK1P26718 216 aa23.38■■□□□ 1.33
CLCNKA-207ENST00000495784 ZNF157P51786 506 aaPredicted RBP23.38■■□□□ 1.33
CLCNKA-207ENST00000495784 CCDC102AQ96A19 550 aa23.38■■□□□ 1.33
CLCNKA-207ENST00000495784 FOXO4P98177 505 aa23.37■■□□□ 1.33
CLCNKA-207ENST00000495784 GRM8O00222 908 aa23.36■■□□□ 1.33
CLCNKA-207ENST00000495784 TTLL5Q6EMB2 1281 aa23.36■■□□□ 1.33
CLCNKA-207ENST00000495784 ZIC5Q96T25 663 aa23.36■■□□□ 1.33
CLCNKA-207ENST00000495784 FAM155AB1AL88 458 aaPredicted RBP23.35■■□□□ 1.33
CLCNKA-207ENST00000495784 SLC4A10Q6U841 1118 aa23.35■■□□□ 1.33
CLCNKA-207ENST00000495784 LMBR1LQ6UX01 489 aa23.35■■□□□ 1.33
CLCNKA-207ENST00000495784 C9orf78Q9NZ63 289 aaPredicted RBP23.35■■□□□ 1.33
CLCNKA-207ENST00000495784 CCDC57Q2TAC2 916 aa23.34■■□□□ 1.33
CLCNKA-207ENST00000495784 NBPF9Q3BBW0 867 aa23.34■■□□□ 1.33
CLCNKA-207ENST00000495784 TAF7LQ5H9L4 462 aa23.34■■□□□ 1.33
CLCNKA-207ENST00000495784 ABHD8Q96I13 439 aa23.34■■□□□ 1.33
CLCNKA-207ENST00000495784 TAF5LO75529 589 aa23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 ALDH1L1O75891 902 aa23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 MMP14P50281 582 aa23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 FKBP1BP68106 108 aa23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 GTF2IP78347 998 aa23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 HELBQ8NG08 1087 aaPredicted RBP23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 HDAC9Q9UKV0 1011 aa23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 SCAF8Q9UPN6 1271 aaKnown RBP23.33■■□□□ 1.33
CLCNKA-207ENST00000495784 WNT10BO00744 389 aa23.32■■□□□ 1.32
CLCNKA-207ENST00000495784 KIF23Q02241 960 aaPredicted RBP23.32■■□□□ 1.32
CLCNKA-207ENST00000495784 EPHA10Q5JZY3 1008 aa23.32■■□□□ 1.32
CLCNKA-207ENST00000495784 KIAA0825Q8IV33 1275 aa23.32■■□□□ 1.32
CLCNKA-207ENST00000495784 SRCIN1Q9C0H9 1055 aa23.32■■□□□ 1.32
CLCNKA-207ENST00000495784 CD209Q9NNX6 404 aa23.32■■□□□ 1.32
CLCNKA-207ENST00000495784 SNAP23O00161 211 aa23.31■■□□□ 1.32
CLCNKA-207ENST00000495784 SASH1O94885 1247 aa23.31■■□□□ 1.32
CLCNKA-207ENST00000495784 SLC10A3P09131 477 aa23.31■■□□□ 1.32
CLCNKA-207ENST00000495784 CNNM1Q9NRU3 951 aa23.31■■□□□ 1.32
CLCNKA-207ENST00000495784 ZNF521Q96K83 1311 aa23.31■■□□□ 1.32
CLCNKA-207ENST00000495784 LDHAL6AQ6ZMR3 332 aa23.3■■□□□ 1.32
CLCNKA-207ENST00000495784 C15orf52Q6ZUT6 534 aaKnown RBP23.3■■□□□ 1.32
CLCNKA-207ENST00000495784 PRAMEF18Q5VWM3 479 aa23.29■■□□□ 1.32
CLCNKA-207ENST00000495784 ZNF804AQ7Z570 1209 aa23.29■■□□□ 1.32
CLCNKA-207ENST00000495784 ZNF594Q96JF6 807 aaPredicted RBP23.29■■□□□ 1.32
CLCNKA-207ENST00000495784 ZNF646O15015 1829 aaPredicted RBP23.29■■□□□ 1.32
CLCNKA-207ENST00000495784 PAPPA2Q9BXP8 1791 aa23.28■■□□□ 1.32
CLCNKA-207ENST00000495784 PLIN1O60240 522 aa23.28■■□□□ 1.32
CLCNKA-207ENST00000495784 NF2P35240 595 aa23.28■■□□□ 1.32
CLCNKA-207ENST00000495784 TTLL12Q14166 644 aaPredicted RBP23.28■■□□□ 1.32
CLCNKA-207ENST00000495784 IRS2Q9Y4H2 1338 aa23.28■■□□□ 1.32
CLCNKA-207ENST00000495784 RASAL3Q86YV0 1011 aa23.27■■□□□ 1.32
CLCNKA-207ENST00000495784 SAGE1Q9NXZ1 904 aa23.27■■□□□ 1.32
CLCNKA-207ENST00000495784 UBE2Q2LH0YL09 131 aa23.26■■□□□ 1.31
CLCNKA-207ENST00000495784 MOB2Q70IA6 237 aa23.26■■□□□ 1.31
CLCNKA-207ENST00000495784 APOBEC3FQ8IUX4 373 aaKnown RBP23.26■■□□□ 1.31
CLCNKA-207ENST00000495784 IL1R1P14778 569 aa23.25■■□□□ 1.31
CLCNKA-207ENST00000495784 DLGAP5Q15398 846 aa23.25■■□□□ 1.31
CLCNKA-207ENST00000495784 REM2Q8IYK8 340 aaPredicted RBP23.25■■□□□ 1.31
CLCNKA-207ENST00000495784 SUCLG2Q96I99 432 aa23.25■■□□□ 1.31
CLCNKA-207ENST00000495784 CSRNP1Q96S65 589 aa23.25■■□□□ 1.31
CLCNKA-207ENST00000495784 E9PSI1 815 aa23.24■■□□□ 1.31
CLCNKA-207ENST00000495784 TRPA1O75762 1119 aa23.24■■□□□ 1.31
CLCNKA-207ENST00000495784 CERS5Q8N5B7 392 aa23.24■■□□□ 1.31
CLCNKA-207ENST00000495784 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
CLCNKA-207ENST00000495784 RNF186Q9NXI6 227 aa23.24■■□□□ 1.31
CLCNKA-207ENST00000495784 CCDC85CA6NKD9 419 aa23.23■■□□□ 1.31
CLCNKA-207ENST00000495784 F8W031 263 aaPredicted RBP23.23■■□□□ 1.31
CLCNKA-207ENST00000495784 NBPF7P0C2Y1 421 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms