RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 WDR33Q9C0J8 1336 aaKnown RBP9.13□□□□□ -0.95
VPS52-221ENST00000495755 IRS2Q9Y4H2 1338 aa9.13□□□□□ -0.95
VPS52-221ENST00000495755 CELF2O95319 508 aaKnown RBP9.13□□□□□ -0.95
VPS52-221ENST00000495755 NBPF7P0C2Y1 421 aaPredicted RBP9.13□□□□□ -0.95
VPS52-221ENST00000495755 USP17L8P0C7I0 530 aa9.13□□□□□ -0.95
VPS52-221ENST00000495755 KIF4BQ2VIQ3 1234 aa9.13□□□□□ -0.95
VPS52-221ENST00000495755 ALDH1L2Q3SY69 923 aa9.13□□□□□ -0.95
VPS52-221ENST00000495755 DLK2Q6UY11 383 aa9.13□□□□□ -0.95
VPS52-221ENST00000495755 C15orf52Q6ZUT6 534 aaKnown RBP9.13□□□□□ -0.95
VPS52-221ENST00000495755 SUCLG2Q96I99 432 aa9.13□□□□□ -0.95
VPS52-221ENST00000495755 WBP1LQ9NX94 342 aa9.13□□□□□ -0.95
VPS52-221ENST00000495755 SPEF2Q9C093 1822 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 ASTN2O75129 1339 aaPredicted RBP9.12□□□□□ -0.95
VPS52-221ENST00000495755 SNAP23O00161 211 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 TAF5LO75529 589 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 CCDC57Q2TAC2 916 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 STRIP1Q5VSL9 837 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 KRT26Q7Z3Y9 468 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 SAPCD2Q86UD0 394 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 HELBQ8NG08 1087 aaPredicted RBP9.12□□□□□ -0.95
VPS52-221ENST00000495755 DCPSQ96C86 337 aaKnown RBP9.12□□□□□ -0.95
VPS52-221ENST00000495755 ZNF594Q96JF6 807 aaPredicted RBP9.12□□□□□ -0.95
VPS52-221ENST00000495755 HHIPL1Q96JK4 782 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 CAPNS2Q96L46 248 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 MXD3Q9BW11 206 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 CHMP3Q9Y3E7 222 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 TRPM7Q96QT4 1865 aa9.12□□□□□ -0.95
VPS52-221ENST00000495755 PSME4Q14997 1843 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 FOXN1O15353 648 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 CT47B1P0C2W7 299 aaPredicted RBP9.11□□□□□ -0.95
VPS52-221ENST00000495755 ECE1P42892 770 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 KCNJ4P48050 445 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 SCARF1Q14162 830 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 RABL6Q3YEC7 729 aaPredicted RBP9.11□□□□□ -0.95
VPS52-221ENST00000495755 TTLL5Q6EMB2 1281 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 CYP4F22Q6NT55 531 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 LDHAL6AQ6ZMR3 332 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 ANKRD44Q8N8A2 993 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 USP44Q9H0E7 712 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 CD209Q9NNX6 404 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 MYOZ2Q9NPC6 264 aa9.11□□□□□ -0.95
VPS52-221ENST00000495755 MYO3BQ8WXR4 1341 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 ADM5C9JUS6 153 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 IL1R1P14778 569 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 MMP14P50281 582 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 BRPF1P55201 1214 aaPredicted RBP9.1□□□□□ -0.95
VPS52-221ENST00000495755 MAP2K1Q02750 393 aaPredicted RBP9.1□□□□□ -0.95
VPS52-221ENST00000495755 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 ANGEL2Q5VTE6 544 aaKnown RBP9.1□□□□□ -0.95
VPS52-221ENST00000495755 PUS3Q9BZE2 481 aaKnown RBP9.1□□□□□ -0.95
VPS52-221ENST00000495755 BICC1Q9H694 974 aaKnown RBP9.1□□□□□ -0.95
VPS52-221ENST00000495755 ZNF408Q9H9D4 720 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 SMC4Q9NTJ3 1288 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 GGA3Q9NZ52 723 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 RIPOR2Q9Y4F9 1068 aa9.1□□□□□ -0.95
VPS52-221ENST00000495755 ZNF646O15015 1829 aaPredicted RBP9.1□□□□□ -0.95
VPS52-221ENST00000495755 PITPNM2Q9BZ72 1349 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 AOC2O75106 756 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 MAP2K2P36507 400 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 GTF2IP78347 998 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 NBPF9Q3BBW0 867 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
VPS52-221ENST00000495755 SULF1Q8IWU6 871 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 OGFOD1Q8N543 542 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 FBXW7Q969H0 707 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 AIDAQ96BJ3 306 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 CDCA5Q96FF9 252 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 CNNM1Q9NRU3 951 aa9.09□□□□□ -0.95
VPS52-221ENST00000495755 NOB1Q9ULX3 412 aaKnown RBP9.09□□□□□ -0.95
VPS52-221ENST00000495755 POLR2AP24928 1970 aaKnown RBP9.08□□□□□ -0.96
VPS52-221ENST00000495755 WNT10BO00744 389 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 PLIN1O60240 522 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 CTCFP49711 727 aaPredicted RBP9.08□□□□□ -0.96
VPS52-221ENST00000495755 RARSP54136 660 aaKnown RBP9.08□□□□□ -0.96
VPS52-221ENST00000495755 HUNKP57058 714 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 UBE4AQ14139 1066 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 ZNF804AQ7Z570 1209 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 MIER1Q8N108 512 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 CERS5Q8N5B7 392 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 C2orf69Q8N8R5 385 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 ZBED3Q96IU2 234 aaPredicted RBP9.08□□□□□ -0.96
VPS52-221ENST00000495755 GBA2Q9HCG7 927 aaPredicted RBP9.08□□□□□ -0.96
VPS52-221ENST00000495755 PRDM10Q9NQV6 1147 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 THSD7BQ9C0I4 1608 aa9.08□□□□□ -0.96
VPS52-221ENST00000495755 MROH5Q6ZUA9 1318 aa9.07□□□□□ -0.96
VPS52-221ENST00000495755 A0A1B0GUL6 1792 aa9.07□□□□□ -0.96
VPS52-221ENST00000495755 SASH1O94885 1247 aa9.07□□□□□ -0.96
VPS52-221ENST00000495755 HSPA8P11142 646 aaKnown RBP9.07□□□□□ -0.96
VPS52-221ENST00000495755 FKBP1AP62942 108 aaKnown RBP9.07□□□□□ -0.96
VPS52-221ENST00000495755 GRM1Q13255 1194 aa9.07□□□□□ -0.96
VPS52-221ENST00000495755 LRRC24Q50LG9 513 aa9.07□□□□□ -0.96
VPS52-221ENST00000495755 KIAA0825Q8IV33 1275 aa9.07□□□□□ -0.96
VPS52-221ENST00000495755 TNS4Q8IZW8 715 aa9.07□□□□□ -0.96
VPS52-221ENST00000495755 FAM84BQ96KN1 310 aaPredicted RBP9.07□□□□□ -0.96
VPS52-221ENST00000495755 API5Q9BZZ5 524 aaKnown RBP9.07□□□□□ -0.96
VPS52-221ENST00000495755 FAM205AQ6ZU69 1335 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 FAM155AB1AL88 458 aaPredicted RBP9.06□□□□□ -0.96
VPS52-221ENST00000495755 HIBADHP31937 336 aaKnown RBP9.06□□□□□ -0.96
VPS52-221ENST00000495755 GYG1P46976 350 aa9.06□□□□□ -0.96
VPS52-221ENST00000495755 RFX5P48382 616 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms