RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 WBP1LQ9NX94 342 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 JAG2Q9Y219 1238 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 A0A1B0GUL6 1792 aa13.62□□□□□ -0.23
RFTN1-211ENST00000495666 USP17L3A6NCW0 530 aa13.61□□□□□ -0.23
RFTN1-211ENST00000495666 USP17L4A6NCW7 530 aa13.61□□□□□ -0.23
RFTN1-211ENST00000495666 VIL1P09327 827 aaKnown RBP13.61□□□□□ -0.23
RFTN1-211ENST00000495666 HSPA8P11142 646 aaKnown RBP13.61□□□□□ -0.23
RFTN1-211ENST00000495666 MAP2K1Q02750 393 aaPredicted RBP13.61□□□□□ -0.23
RFTN1-211ENST00000495666 PRAMEF18Q5VWM3 479 aa13.61□□□□□ -0.23
RFTN1-211ENST00000495666 USP17L1Q7RTZ2 530 aa13.61□□□□□ -0.23
RFTN1-211ENST00000495666 TXNRD3Q86VQ6 643 aa13.61□□□□□ -0.23
RFTN1-211ENST00000495666 ZNF594Q96JF6 807 aaPredicted RBP13.61□□□□□ -0.23
RFTN1-211ENST00000495666 BSDC1Q9NW68 430 aaPredicted RBP13.61□□□□□ -0.23
RFTN1-211ENST00000495666 THSD7BQ9C0I4 1608 aa13.61□□□□□ -0.23
RFTN1-211ENST00000495666 ANKRD18BA2A2Z9 1011 aa13.6□□□□□ -0.23
RFTN1-211ENST00000495666 SASH1O94885 1247 aa13.6□□□□□ -0.23
RFTN1-211ENST00000495666 SCARF1Q14162 830 aa13.6□□□□□ -0.23
RFTN1-211ENST00000495666 ZC3H15Q8WU90 426 aaKnown RBP13.6□□□□□ -0.23
RFTN1-211ENST00000495666 ZIC5Q96T25 663 aa13.6□□□□□ -0.23
RFTN1-211ENST00000495666 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
RFTN1-211ENST00000495666 C9orf78Q9NZ63 289 aaPredicted RBP13.6□□□□□ -0.23
RFTN1-211ENST00000495666 ZNF804BA4D1E1 1349 aa13.6□□□□□ -0.23
RFTN1-211ENST00000495666 MED23Q9ULK4 1368 aa13.59□□□□□ -0.23
RFTN1-211ENST00000495666 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
RFTN1-211ENST00000495666 USP17L8P0C7I0 530 aa13.59□□□□□ -0.23
RFTN1-211ENST00000495666 CHRNDQ07001 517 aa13.59□□□□□ -0.23
RFTN1-211ENST00000495666 IFIT5Q13325 482 aaKnown RBP13.59□□□□□ -0.23
RFTN1-211ENST00000495666 LMBR1LQ6UX01 489 aa13.59□□□□□ -0.23
RFTN1-211ENST00000495666 KIAA0825Q8IV33 1275 aa13.59□□□□□ -0.23
RFTN1-211ENST00000495666 CDCA5Q96FF9 252 aa13.59□□□□□ -0.23
RFTN1-211ENST00000495666 GBA2Q9HCG7 927 aaPredicted RBP13.59□□□□□ -0.23
RFTN1-211ENST00000495666 CASP8AP2Q9UKL3 1982 aa13.59□□□□□ -0.23
RFTN1-211ENST00000495666 ZNF646O15015 1829 aaPredicted RBP13.59□□□□□ -0.23
RFTN1-211ENST00000495666 CASP7P55210 303 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 GTF2IP78347 998 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 PRKG1Q13976 671 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 TTLL12Q14166 644 aaPredicted RBP13.58□□□□□ -0.24
RFTN1-211ENST00000495666 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 BEND3Q5T5X7 828 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 MOB2Q70IA6 237 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 C2orf69Q8N8R5 385 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 PGAP2Q9UHJ9 254 aa13.58□□□□□ -0.24
RFTN1-211ENST00000495666 GRM8O00222 908 aa13.57□□□□□ -0.24
RFTN1-211ENST00000495666 ZNF157P51786 506 aaPredicted RBP13.57□□□□□ -0.24
RFTN1-211ENST00000495666 FOXO4P98177 505 aa13.57□□□□□ -0.24
RFTN1-211ENST00000495666 NBPF9Q3BBW0 867 aa13.57□□□□□ -0.24
RFTN1-211ENST00000495666 PODNQ7Z5L7 613 aa13.57□□□□□ -0.24
RFTN1-211ENST00000495666 AGBL3Q8NEM8 1001 aa13.57□□□□□ -0.24
RFTN1-211ENST00000495666 ANKRD2Q9GZV1 360 aa13.57□□□□□ -0.24
RFTN1-211ENST00000495666 CNNM1Q9NRU3 951 aa13.57□□□□□ -0.24
RFTN1-211ENST00000495666 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
RFTN1-211ENST00000495666 CCDC57Q2TAC2 916 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 DACT2Q5SW24 774 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 TTLL5Q6EMB2 1281 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 OGFOD1Q8N543 542 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 SUCLG2Q96I99 432 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 SRCIN1Q9C0H9 1055 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 COA1Q9GZY4 146 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 PRDM10Q9NQV6 1147 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 LEMD3Q9Y2U8 911 aa13.56□□□□□ -0.24
RFTN1-211ENST00000495666 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
RFTN1-211ENST00000495666 PLA2G12BQ9BX93 195 aa13.55□□□□□ -0.24
RFTN1-211ENST00000495666 CSF1RP07333 972 aa13.54□□□□□ -0.24
RFTN1-211ENST00000495666 ZNF280AP59817 542 aaPredicted RBP13.54□□□□□ -0.24
RFTN1-211ENST00000495666 LDHAL6AQ6ZMR3 332 aa13.54□□□□□ -0.24
RFTN1-211ENST00000495666 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
RFTN1-211ENST00000495666 GMLQ99445 158 aa13.54□□□□□ -0.24
RFTN1-211ENST00000495666 FZD1Q9UP38 647 aa13.54□□□□□ -0.24
RFTN1-211ENST00000495666 AKAP11Q9UKA4 1901 aa13.54□□□□□ -0.24
RFTN1-211ENST00000495666 UBE2Q2LH0YL09 131 aa13.53□□□□□ -0.24
RFTN1-211ENST00000495666 MAP2K2P36507 400 aa13.53□□□□□ -0.24
RFTN1-211ENST00000495666 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
RFTN1-211ENST00000495666 PUS3Q9BZE2 481 aaKnown RBP13.53□□□□□ -0.24
RFTN1-211ENST00000495666 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
RFTN1-211ENST00000495666 IQSEC3Q9UPP2 1182 aaPredicted RBP13.53□□□□□ -0.24
RFTN1-211ENST00000495666 PCDHAC2Q9Y5I4 1007 aa13.53□□□□□ -0.24
RFTN1-211ENST00000495666 CLRN2A0PK11 232 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 CCDC85CA6NKD9 419 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 WNT10BO00744 389 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 NBPF7P0C2Y1 421 aaPredicted RBP13.52□□□□□ -0.25
RFTN1-211ENST00000495666 KIF23Q02241 960 aaPredicted RBP13.52□□□□□ -0.25
RFTN1-211ENST00000495666 NOGQ13253 232 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.25
RFTN1-211ENST00000495666 STRIP1Q5VSL9 837 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 ZNF804AQ7Z570 1209 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 MRPL50Q8N5N7 158 aaKnown RBP13.52□□□□□ -0.25
RFTN1-211ENST00000495666 BICC1Q9H694 974 aaKnown RBP13.52□□□□□ -0.25
RFTN1-211ENST00000495666 CD209Q9NNX6 404 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 PAPPA2Q9BXP8 1791 aa13.52□□□□□ -0.25
RFTN1-211ENST00000495666 GYG1P46976 350 aa13.51□□□□□ -0.25
RFTN1-211ENST00000495666 BRPF1P55201 1214 aaPredicted RBP13.51□□□□□ -0.25
RFTN1-211ENST00000495666 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
RFTN1-211ENST00000495666 SSH1Q8WYL5 1049 aa13.51□□□□□ -0.25
RFTN1-211ENST00000495666 VEZTQ9HBM0 779 aa13.51□□□□□ -0.25
RFTN1-211ENST00000495666 SMC4Q9NTJ3 1288 aa13.51□□□□□ -0.25
RFTN1-211ENST00000495666 MYO3BQ8WXR4 1341 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 ZNF521Q96K83 1311 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 E9PSI1 815 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 TRPA1O75762 1119 aa13.5□□□□□ -0.25
RFTN1-211ENST00000495666 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms