RNA–Protein interactions for RNA: ENST00000495615.5

CBWD5-231, Transcript of COBW domain containing 5, human

TSL 3

Gene CBWD5, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD5-231	ENST00000495615	SMNDC1	O75940	238 aa	Known RBP eCLIP	8.91	□□□□□ -0.98
CBWD5-231	ENST00000495615	APBA3	O96018	575 aa		8.91	□□□□□ -0.98
CBWD5-231	ENST00000495615	EPHA1	P21709	976 aa		8.91	□□□□□ -0.98
CBWD5-231	ENST00000495615	ORC1	Q13415	861 aa		8.91	□□□□□ -0.98
CBWD5-231	ENST00000495615	SETDB1	Q15047	1291 aa		8.91	□□□□□ -0.98
CBWD5-231	ENST00000495615	ZKSCAN3	Q9BRR0	538 aa		8.91	□□□□□ -0.98
CBWD5-231	ENST00000495615	DLL1	O00548	723 aa		8.9	□□□□□ -0.98
CBWD5-231	ENST00000495615	TM4SF5	O14894	197 aa		8.9	□□□□□ -0.98
CBWD5-231	ENST00000495615	CDC25B	P30305	580 aa		8.9	□□□□□ -0.98
CBWD5-231	ENST00000495615	MBTPS1	Q14703	1052 aa		8.9	□□□□□ -0.98
CBWD5-231	ENST00000495615	AMOTL2	Q9Y2J4	779 aa		8.9	□□□□□ -0.98
CBWD5-231	ENST00000495615	LINC01387	J3KSC0	135 aa		8.89	□□□□□ -0.99
CBWD5-231	ENST00000495615	GALNT11	Q8NCW6	608 aa		8.89	□□□□□ -0.99
CBWD5-231	ENST00000495615	PMEPA1	Q969W9	287 aa		8.89	□□□□□ -0.99
CBWD5-231	ENST00000495615	LENG1	Q96BZ8	264 aa	Predicted RBP	8.89	□□□□□ -0.99
CBWD5-231	ENST00000495615	OSMR	Q99650	979 aa		8.89	□□□□□ -0.99
CBWD5-231	ENST00000495615	BIN2	Q9UBW5	565 aa	Predicted RBP	8.89	□□□□□ -0.99
CBWD5-231	ENST00000495615	PPME1	Q9Y570	386 aa		8.89	□□□□□ -0.99
CBWD5-231	ENST00000495615	PDE2A	O00408	941 aa	Predicted RBP	8.88	□□□□□ -0.99
CBWD5-231	ENST00000495615	CDC27	P30260	824 aa		8.88	□□□□□ -0.99
CBWD5-231	ENST00000495615	KCNA1	Q09470	495 aa		8.88	□□□□□ -0.99
CBWD5-231	ENST00000495615	ADGRE1	Q14246	886 aa		8.88	□□□□□ -0.99
CBWD5-231	ENST00000495615	ADAM19	Q9H013	955 aa		8.88	□□□□□ -0.99
CBWD5-231	ENST00000495615	EDN3	P14138	238 aa		8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	PTPRA	P18433	802 aa		8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	GATA4	P43694	442 aa		8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	TMC7	Q7Z402	723 aa		8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	TMEM102	Q8N9M5	508 aa	Predicted RBP	8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	NACC1	Q96RE7	527 aa		8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	CARD10	Q9BWT7	1032 aa		8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	RBCK1	Q9BYM8	510 aa		8.87	□□□□□ -0.99
CBWD5-231	ENST00000495615	C9orf172	C9J069	976 aa		8.86	□□□□□ -0.99
CBWD5-231	ENST00000495615	NXPE3	Q969Y0	559 aa		8.86	□□□□□ -0.99
CBWD5-231	ENST00000495615	CITED4	Q96RK1	184 aa		8.86	□□□□□ -0.99
CBWD5-231	ENST00000495615	NIF3L1	Q9GZT8	377 aa		8.86	□□□□□ -0.99
CBWD5-231	ENST00000495615	METTL12	A8MUP2	240 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	FURIN	P09958	794 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	PDE3B	Q13370	1112 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	DOC2B	Q14184	412 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	FOXD4L3	Q6VB84	417 aa	Predicted RBP	8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	GALNT12	Q8IXK2	581 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	CACTIN-AS1	Q8N1I8	211 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	TMC1	Q8TDI8	760 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	TPSG1	Q9NRR2	321 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	KCNK4	Q9NYG8	393 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	USP21	Q9UK80	565 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615	SOX13	Q9UN79	622 aa		8.85	□□□□□ -0.99
CBWD5-231	ENST00000495615		A0A1W2PP55	124 aa		8.84	□□□□□ -0.99
CBWD5-231	ENST00000495615	WISP1	O95388	367 aa		8.84	□□□□□ -0.99
CBWD5-231	ENST00000495615	HGSNAT	Q68CP4	663 aa		8.84	□□□□□ -0.99
CBWD5-231	ENST00000495615	IGF2-AS	Q6U949	168 aa		8.84	□□□□□ -0.99
CBWD5-231	ENST00000495615	VN1R5	Q7Z5H4	357 aa		8.84	□□□□□ -0.99
CBWD5-231	ENST00000495615	BHLHE41	Q9C0J9	482 aa	Predicted RBP	8.84	□□□□□ -0.99
CBWD5-231	ENST00000495615	DCTN4	Q9UJW0	460 aa		8.84	□□□□□ -0.99
CBWD5-231	ENST00000495615	EIF1AY	O14602	144 aa	Known RBP	8.83	□□□□□ -1
CBWD5-231	ENST00000495615	FSCN2	O14926	492 aa		8.83	□□□□□ -1
CBWD5-231	ENST00000495615	NOS3	P29474	1203 aa		8.83	□□□□□ -1
CBWD5-231	ENST00000495615	TXNRD3	Q86VQ6	643 aa		8.83	□□□□□ -1
CBWD5-231	ENST00000495615	MUC3B	Q9H195	1237 aa		8.83	□□□□□ -1
CBWD5-231	ENST00000495615		H3BRJ5	948 aa		8.82	□□□□□ -1
CBWD5-231	ENST00000495615	DDX3Y	O15523	660 aa	Known RBP	8.82	□□□□□ -1
CBWD5-231	ENST00000495615	ADAM11	O75078	769 aa		8.82	□□□□□ -1
CBWD5-231	ENST00000495615	ALX3	O95076	343 aa		8.82	□□□□□ -1
CBWD5-231	ENST00000495615	NRG1	Q02297	640 aa	Predicted RBP	8.82	□□□□□ -1
CBWD5-231	ENST00000495615	MAP4K3	Q8IVH8	894 aa		8.82	□□□□□ -1
CBWD5-231	ENST00000495615	ALKBH8	Q96BT7	664 aa	Known RBP	8.82	□□□□□ -1
CBWD5-231	ENST00000495615	SSBP4	Q9BWG4	385 aa	Predicted RBP	8.82	□□□□□ -1
CBWD5-231	ENST00000495615	SRA1	Q9HD15	236 aa	Known RBP	8.82	□□□□□ -1
CBWD5-231	ENST00000495615	NPHS2	Q9NP85	383 aa		8.82	□□□□□ -1
CBWD5-231	ENST00000495615	CPNE3	O75131	537 aa	Known RBP	8.81	□□□□□ -1
CBWD5-231	ENST00000495615	MAPK1	P28482	360 aa		8.81	□□□□□ -1
CBWD5-231	ENST00000495615	IREB2	P48200	963 aa	Known RBP	8.81	□□□□□ -1
CBWD5-231	ENST00000495615	AGGF1	Q8N302	714 aa	eCLIP	8.81	□□□□□ -1
CBWD5-231	ENST00000495615	ASAP3	Q8TDY4	903 aa		8.81	□□□□□ -1
CBWD5-231	ENST00000495615	WFDC12	Q8WWY7	111 aa		8.81	□□□□□ -1
CBWD5-231	ENST00000495615	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	8.81	□□□□□ -1
CBWD5-231	ENST00000495615	KLHDC7B	Q96G42	594 aa		8.81	□□□□□ -1
CBWD5-231	ENST00000495615	DMRTB1	Q96MA1	342 aa		8.81	□□□□□ -1
CBWD5-231	ENST00000495615	TCF12	Q99081	682 aa		8.81	□□□□□ -1
CBWD5-231	ENST00000495615	ITGB7	P26010	798 aa		8.8	□□□□□ -1
CBWD5-231	ENST00000495615	GRIA4	P48058	902 aa		8.8	□□□□□ -1
CBWD5-231	ENST00000495615	DSC3	Q14574	896 aa		8.8	□□□□□ -1
CBWD5-231	ENST00000495615	CCNJL	Q8IV13	435 aa		8.8	□□□□□ -1
CBWD5-231	ENST00000495615	BSND	Q8WZ55	320 aa		8.8	□□□□□ -1
CBWD5-231	ENST00000495615	CCDC74A	Q96AQ1	378 aa		8.8	□□□□□ -1
CBWD5-231	ENST00000495615		F8W735	103 aa	Predicted RBP	8.79	□□□□□ -1
CBWD5-231	ENST00000495615	CD68	P34810	354 aa	Predicted RBP	8.79	□□□□□ -1
CBWD5-231	ENST00000495615	RSPO4	Q2I0M5	234 aa	Predicted RBP	8.79	□□□□□ -1
CBWD5-231	ENST00000495615	SPRED3	Q2MJR0	410 aa		8.79	□□□□□ -1
CBWD5-231	ENST00000495615	NKAPL	Q5M9Q1	402 aa		8.79	□□□□□ -1
CBWD5-231	ENST00000495615	UBASH3B	Q8TF42	649 aa		8.79	□□□□□ -1
CBWD5-231	ENST00000495615	MEGF10	Q96KG7	1140 aa		8.79	□□□□□ -1
CBWD5-231	ENST00000495615	CSRNP1	Q96S65	589 aa		8.79	□□□□□ -1
CBWD5-231	ENST00000495615	MRPL18	Q9H0U6	180 aa	Known RBP	8.79	□□□□□ -1
CBWD5-231	ENST00000495615	SEC31B	Q9NQW1	1179 aa		8.79	□□□□□ -1
CBWD5-231	ENST00000495615	TREH	O43280	583 aa		8.78	□□□□□ -1
CBWD5-231	ENST00000495615	ADAM23	O75077	832 aa		8.78	□□□□□ -1
CBWD5-231	ENST00000495615	PIP4K2B	P78356	416 aa		8.78	□□□□□ -1
CBWD5-231	ENST00000495615	SUZ12	Q15022	739 aa	Known RBP	8.78	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms