RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 PAPOLAP51003 745 aaKnown RBP7.22□□□□□ -1.25
FGD4-208ENST00000494977 PSME1Q06323 249 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 IFFO1Q0D2I5 559 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 DCTN1Q14203 1278 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 CCDC40Q4G0X9 1142 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 SPTY2D1Q68D10 685 aaPredicted RBP7.22□□□□□ -1.25
FGD4-208ENST00000494977 YTHDF3Q7Z739 585 aaKnown RBP7.22□□□□□ -1.25
FGD4-208ENST00000494977 CCDC170Q8IYT3 715 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 CLIC6Q96NY7 704 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 OSBPL5Q9H0X9 879 aaPredicted RBP7.22□□□□□ -1.25
FGD4-208ENST00000494977 CENPHQ9H3R5 247 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 INCENPQ9NQS7 918 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 DDX19AQ9NUU7 478 aaKnown RBP7.22□□□□□ -1.25
FGD4-208ENST00000494977 UGGT2Q9NYU1 1516 aa7.22□□□□□ -1.25
FGD4-208ENST00000494977 RNF40O75150 1001 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 PHACTR2O75167 634 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 TRIM27P14373 513 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 SFPQP23246 707 aaKnown RBP eCLIP7.21□□□□□ -1.26
FGD4-208ENST00000494977 SF3B2Q13435 895 aaKnown RBP7.21□□□□□ -1.26
FGD4-208ENST00000494977 THEMIS2Q5TEJ8 643 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 TAX1BP1Q86VP1 789 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 TRIM58Q8NG06 486 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 BCAS4Q8TDM0 211 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 CCDC47Q96A33 483 aaKnown RBP7.21□□□□□ -1.26
FGD4-208ENST00000494977 AGAP3Q96P47 875 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 TRIM4Q9C037 500 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 MMADHCQ9H3L0 296 aaPredicted RBP7.21□□□□□ -1.26
FGD4-208ENST00000494977 VIPAS39Q9H9C1 493 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 SNAPC4Q5SXM2 1469 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 TTC21BQ7Z4L5 1316 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 ABCA10Q8WWZ4 1543 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 GOLGA6L9A6NEM1 432 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 SPDYE3A6NKU9 549 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 BECN2A8MW95 431 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 ZSCAN12O43309 604 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 RASSF9O75901 435 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 F13A1P00488 732 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 DEUP1Q05D60 604 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 ACTN3Q08043 901 aaPredicted RBP7.21□□□□□ -1.26
FGD4-208ENST00000494977 DRP2Q13474 957 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 CASP8Q14790 479 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 FAM114A1Q8IWE2 563 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 RBM17Q96I25 401 aaKnown RBP7.21□□□□□ -1.26
FGD4-208ENST00000494977 RMDN2Q96LZ7 410 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 PRAM1Q96QH2 718 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 EPAS1Q99814 870 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 EPC1Q9H2F5 836 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 CEP126Q9P2H0 1117 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 RAB21Q9UL25 225 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 CORO1CQ9ULV4 474 aaPredicted RBP7.21□□□□□ -1.26
FGD4-208ENST00000494977 CFTRP13569 1480 aa7.21□□□□□ -1.26
FGD4-208ENST00000494977 PTPRGP23470 1445 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 RTL1A6NKG5 1358 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 PDLIM1O00151 329 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 LIN7AO14910 233 aaPredicted RBP7.2□□□□□ -1.26
FGD4-208ENST00000494977 STX6O43752 255 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 NBPF7P0C2Y1 421 aaPredicted RBP7.2□□□□□ -1.26
FGD4-208ENST00000494977 SYT1P21579 422 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 CCDC38Q502W7 563 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 TTC22Q5TAA0 569 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 MIS18BP1Q6P0N0 1132 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 PARP9Q8IXQ6 854 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 SPAG5Q96R06 1193 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 ARPC5LQ9BPX5 153 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 YIPF2Q9BWQ6 316 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 VCPKMTQ9H867 229 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 PAPOLBQ9NRJ5 636 aaKnown RBP7.2□□□□□ -1.26
FGD4-208ENST00000494977 BIN2Q9UBW5 565 aaPredicted RBP7.2□□□□□ -1.26
FGD4-208ENST00000494977 PCDHGC5Q9Y5F6 944 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 USP16Q9Y5T5 823 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 RGS12O14924 1447 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 MSH6P52701 1360 aa7.2□□□□□ -1.26
FGD4-208ENST00000494977 GOLGA6L4A6NEF3 574 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 RPSAP08865 295 aaKnown RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 NAT1P18440 290 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 IBSPP21815 317 aaPredicted RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 AARSP49588 968 aaKnown RBP eCLIP7.19□□□□□ -1.26
FGD4-208ENST00000494977 IRAK1P51617 712 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 USP4Q13107 963 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 PPFIA1Q13136 1202 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 CCDC57Q2TAC2 916 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 RBM43Q6ZSC3 357 aaKnown RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 FAM76AQ8TAV0 307 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 ZCRB1Q8TBF4 217 aaKnown RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 ZFAND2BQ8WV99 257 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 RBM41Q96IZ5 413 aaKnown RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 UTP6Q9NYH9 597 aaKnown RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 ERBINQ96RT1 1412 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 PZPP20742 1482 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 MAP3K5Q99683 1374 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 ZEB2O60315 1214 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 GSPT1P15170 499 aaKnown RBP7.19□□□□□ -1.26
FGD4-208ENST00000494977 GJA8P48165 433 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 ZBED6P86452 979 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 CCDC15Q0P6D6 951 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 CAMK4Q16566 473 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 HSP90AB2PQ58FF8 381 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 TRIM65Q6PJ69 517 aa7.19□□□□□ -1.26
FGD4-208ENST00000494977 MTHFD1LQ6UB35 978 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms