RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 IQCA1LA6NCM1 817 aa21.38■■□□□ 1.01
SNX17-209ENST00000494893 KCNJ4P48050 445 aa21.38■■□□□ 1.01
SNX17-209ENST00000494893 ZNF646O15015 1829 aaPredicted RBP21.38■■□□□ 1.01
SNX17-209ENST00000494893 VIL1P09327 827 aaKnown RBP21.37■■□□□ 1.01
SNX17-209ENST00000494893 EPHX2P34913 555 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 UBE4AQ14139 1066 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 METTL24Q5JXM2 366 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 PODNQ7Z5L7 613 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 COA1Q9GZY4 146 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 SIL1Q9H173 461 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 COPRSQ9NQ92 184 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 GPRC5DQ9NZD1 345 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 ADAMTSL1Q8N6G6 1762 aa21.37■■□□□ 1.01
SNX17-209ENST00000494893 G3V3G9 751 aa21.36■■□□□ 1.01
SNX17-209ENST00000494893 SRGAP3O43295 1099 aa21.36■■□□□ 1.01
SNX17-209ENST00000494893 DCAF8Q5TAQ9 597 aa21.36■■□□□ 1.01
SNX17-209ENST00000494893 C16orf71Q8IYS4 520 aaPredicted RBP21.36■■□□□ 1.01
SNX17-209ENST00000494893 COG6Q9Y2V7 657 aa21.36■■□□□ 1.01
SNX17-209ENST00000494893 PSME4Q14997 1843 aa21.35■■□□□ 1.01
SNX17-209ENST00000494893 CIAO1O76071 339 aa21.35■■□□□ 1.01
SNX17-209ENST00000494893 PDE8BO95263 885 aa21.35■■□□□ 1.01
SNX17-209ENST00000494893 FGFR2P21802 821 aa21.35■■□□□ 1.01
SNX17-209ENST00000494893 MVPQ14764 893 aaKnown RBP21.35■■□□□ 1.01
SNX17-209ENST00000494893 CD209Q9NNX6 404 aa21.35■■□□□ 1.01
SNX17-209ENST00000494893 MS4A1P11836 297 aa21.34■■□□□ 1.01
SNX17-209ENST00000494893 GMLQ99445 158 aa21.34■■□□□ 1.01
SNX17-209ENST00000494893 MXD3Q9BW11 206 aa21.34■■□□□ 1.01
SNX17-209ENST00000494893 FBXO3Q9UK99 471 aa21.34■■□□□ 1.01
SNX17-209ENST00000494893 ZNF609O15014 1411 aa21.34■■□□□ 1.01
SNX17-209ENST00000494893 USP17L3A6NCW0 530 aa21.33■■□□□ 1.01
SNX17-209ENST00000494893 USP17L4A6NCW7 530 aa21.33■■□□□ 1.01
SNX17-209ENST00000494893 LMOD1P29536 600 aaPredicted RBP21.33■■□□□ 1.01
SNX17-209ENST00000494893 POLA2Q14181 598 aa21.33■■□□□ 1.01
SNX17-209ENST00000494893 DACT2Q5SW24 774 aa21.33■■□□□ 1.01
SNX17-209ENST00000494893 USP17L1Q7RTZ2 530 aa21.33■■□□□ 1.01
SNX17-209ENST00000494893 DPF2Q92785 391 aa21.33■■□□□ 1.01
SNX17-209ENST00000494893 FAM84BQ96KN1 310 aaPredicted RBP21.33■■□□□ 1.01
SNX17-209ENST00000494893 IL1R1P14778 569 aa21.32■■□□□ 1
SNX17-209ENST00000494893 GYG1P46976 350 aa21.32■■□□□ 1
SNX17-209ENST00000494893 ATP8B2P98198 1209 aa21.32■■□□□ 1
SNX17-209ENST00000494893 PDE3AQ14432 1141 aa21.32■■□□□ 1
SNX17-209ENST00000494893 EAPPQ56P03 285 aaPredicted RBP21.32■■□□□ 1
SNX17-209ENST00000494893 RSBN1LQ6PCB5 846 aaPredicted RBP21.32■■□□□ 1
SNX17-209ENST00000494893 CNOT7Q9UIV1 285 aaKnown RBP21.32■■□□□ 1
SNX17-209ENST00000494893 SUPT16HQ9Y5B9 1047 aaKnown RBP21.32■■□□□ 1
SNX17-209ENST00000494893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.32■■□□□ 1
SNX17-209ENST00000494893 EGFRP00533 1210 aa21.31■■□□□ 1
SNX17-209ENST00000494893 RPS12P25398 132 aaKnown RBP21.31■■□□□ 1
SNX17-209ENST00000494893 HIRAP54198 1017 aaPredicted RBP21.31■■□□□ 1
SNX17-209ENST00000494893 FSTL1Q12841 308 aa21.31■■□□□ 1
SNX17-209ENST00000494893 LDHDQ86WU2 507 aa21.31■■□□□ 1
SNX17-209ENST00000494893 MICALL2Q8IY33 904 aa21.31■■□□□ 1
SNX17-209ENST00000494893 SMC1BQ8NDV3 1235 aa21.31■■□□□ 1
SNX17-209ENST00000494893 TRPM4Q8TD43 1214 aa21.31■■□□□ 1
SNX17-209ENST00000494893 SSH3Q8TE77 659 aa21.31■■□□□ 1
SNX17-209ENST00000494893 ADARB2Q9NS39 739 aaKnown RBP21.31■■□□□ 1
SNX17-209ENST00000494893 IL15P40933 162 aaPredicted RBP21.3■■□□□ 1
SNX17-209ENST00000494893 STRIP1Q5VSL9 837 aa21.3■■□□□ 1
SNX17-209ENST00000494893 CEP85Q6P2H3 762 aa21.3■■□□□ 1
SNX17-209ENST00000494893 ZNF804AQ7Z570 1209 aa21.3■■□□□ 1
SNX17-209ENST00000494893 FBXO33Q7Z6M2 555 aa21.3■■□□□ 1
SNX17-209ENST00000494893 ZBTB40Q9NUA8 1239 aa21.3■■□□□ 1
SNX17-209ENST00000494893 GTF2IP78347 998 aa21.29■■□□□ 1
SNX17-209ENST00000494893 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
SNX17-209ENST00000494893 CHADLQ6NUI6 762 aa21.29■■□□□ 1
SNX17-209ENST00000494893 PNMA8AQ86V59 439 aaPredicted RBP21.29■■□□□ 1
SNX17-209ENST00000494893 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.29■■□□□ 1
SNX17-209ENST00000494893 AGBL3Q8NEM8 1001 aa21.29■■□□□ 1
SNX17-209ENST00000494893 TDRD7Q8NHU6 1098 aaKnown RBP21.29■■□□□ 1
SNX17-209ENST00000494893 DDX19BQ9UMR2 479 aa21.29■■□□□ 1
SNX17-209ENST00000494893 HIBADHP31937 336 aaKnown RBP21.28■■□□□ 1
SNX17-209ENST00000494893 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
SNX17-209ENST00000494893 TTLL5Q6EMB2 1281 aa21.28■■□□□ 1
SNX17-209ENST00000494893 USP50Q70EL3 339 aaPredicted RBP21.28■■□□□ 1
SNX17-209ENST00000494893 SAMD7Q7Z3H4 446 aa21.28■■□□□ 1
SNX17-209ENST00000494893 CERS5Q8N5B7 392 aa21.28■■□□□ 1
SNX17-209ENST00000494893 CEP126Q9P2H0 1117 aa21.28■■□□□ 1
SNX17-209ENST00000494893 ZNF280AP59817 542 aaPredicted RBP21.27■■□□□ 1
SNX17-209ENST00000494893 TFCP2Q12800 502 aa21.27■■□□□ 1
SNX17-209ENST00000494893 LPIN2Q92539 896 aa21.27■■□□□ 1
SNX17-209ENST00000494893 FBXW7Q969H0 707 aa21.27■■□□□ 1
SNX17-209ENST00000494893 JAG2Q9Y219 1238 aa21.27■■□□□ 1
SNX17-209ENST00000494893 SASH1O94885 1247 aa21.26■□□□□ 0.99
SNX17-209ENST00000494893 BCAMP50895 628 aa21.26■□□□□ 0.99
SNX17-209ENST00000494893 ATP2B3Q16720 1220 aa21.26■□□□□ 0.99
SNX17-209ENST00000494893 TBC1D10BQ4KMP7 808 aaPredicted RBP21.26■□□□□ 0.99
SNX17-209ENST00000494893 CLEC11AQ9Y240 323 aa21.26■□□□□ 0.99
SNX17-209ENST00000494893 H7C1D1 291 aa21.25■□□□□ 0.99
SNX17-209ENST00000494893 ITGBL1O95965 494 aaPredicted RBP21.25■□□□□ 0.99
SNX17-209ENST00000494893 HSPA6P17066 643 aa21.25■□□□□ 0.99
SNX17-209ENST00000494893 MAP1SQ66K74 1059 aaPredicted RBP21.25■□□□□ 0.99
SNX17-209ENST00000494893 SIRT2Q8IXJ6 389 aa21.25■□□□□ 0.99
SNX17-209ENST00000494893 IQSEC3Q9UPP2 1182 aaPredicted RBP21.25■□□□□ 0.99
SNX17-209ENST00000494893 FAM205AQ6ZU69 1335 aa21.25■□□□□ 0.99
SNX17-209ENST00000494893 IFIT1P09914 478 aaKnown RBP21.24■□□□□ 0.99
SNX17-209ENST00000494893 SLC5A1P13866 664 aa21.24■□□□□ 0.99
SNX17-209ENST00000494893 PGAP2Q9UHJ9 254 aa21.24■□□□□ 0.99
SNX17-209ENST00000494893 NOP58Q9Y2X3 529 aaKnown RBP21.24■□□□□ 0.99
SNX17-209ENST00000494893 USP17L8P0C7I0 530 aa21.23■□□□□ 0.99
SNX17-209ENST00000494893 ADORA1P30542 326 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms