RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 IRS2Q9Y4H2 1338 aa14.86□□□□□ -0.03
VTI1A-208ENST00000494728 LBX1P52954 281 aa14.85□□□□□ -0.03
VTI1A-208ENST00000494728 KRT26Q7Z3Y9 468 aa14.85□□□□□ -0.03
VTI1A-208ENST00000494728 ZIC5Q96T25 663 aa14.85□□□□□ -0.03
VTI1A-208ENST00000494728 G3V3G9 751 aa14.84□□□□□ -0.03
VTI1A-208ENST00000494728 CTCFP49711 727 aaPredicted RBP14.84□□□□□ -0.03
VTI1A-208ENST00000494728 DACT2Q5SW24 774 aa14.84□□□□□ -0.03
VTI1A-208ENST00000494728 DCAF8Q5TAQ9 597 aa14.84□□□□□ -0.03
VTI1A-208ENST00000494728 AIDAQ96BJ3 306 aa14.84□□□□□ -0.03
VTI1A-208ENST00000494728 SCAF8Q9UPN6 1271 aaKnown RBP14.84□□□□□ -0.03
VTI1A-208ENST00000494728 PAPPA2Q9BXP8 1791 aa14.83□□□□□ -0.03
VTI1A-208ENST00000494728 USP17L3A6NCW0 530 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 USP17L4A6NCW7 530 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 IGHMBP2P38935 993 aaKnown RBP14.83□□□□□ -0.04
VTI1A-208ENST00000494728 CHRNDQ07001 517 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 USP17L1Q7RTZ2 530 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 PODNQ7Z5L7 613 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 AGBL3Q8NEM8 1001 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 PRDM10Q9NQV6 1147 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 TSKSQ9UJT2 592 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 ZNF804BA4D1E1 1349 aa14.83□□□□□ -0.04
VTI1A-208ENST00000494728 AKAP11Q9UKA4 1901 aa14.82□□□□□ -0.04
VTI1A-208ENST00000494728 GRM8O00222 908 aa14.82□□□□□ -0.04
VTI1A-208ENST00000494728 ECE1P42892 770 aa14.82□□□□□ -0.04
VTI1A-208ENST00000494728 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
VTI1A-208ENST00000494728 ANGEL2Q5VTE6 544 aaKnown RBP14.82□□□□□ -0.04
VTI1A-208ENST00000494728 ZNF594Q96JF6 807 aaPredicted RBP14.82□□□□□ -0.04
VTI1A-208ENST00000494728 MYOZ2Q9NPC6 264 aa14.82□□□□□ -0.04
VTI1A-208ENST00000494728 TAF5LO75529 589 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 USP17L8P0C7I0 530 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 HUNKP57058 714 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 MAP2K1Q02750 393 aaPredicted RBP14.81□□□□□ -0.04
VTI1A-208ENST00000494728 SCARF1Q14162 830 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 HELBQ8NG08 1087 aaPredicted RBP14.81□□□□□ -0.04
VTI1A-208ENST00000494728 DCPSQ96C86 337 aaKnown RBP14.81□□□□□ -0.04
VTI1A-208ENST00000494728 CDCA5Q96FF9 252 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 KAZALD1Q96I82 304 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 HHIPL1Q96JK4 782 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 LEMD3Q9Y2U8 911 aa14.81□□□□□ -0.04
VTI1A-208ENST00000494728 ANKRD18BA2A2Z9 1011 aa14.8□□□□□ -0.04
VTI1A-208ENST00000494728 FAM155AB1AL88 458 aaPredicted RBP14.8□□□□□ -0.04
VTI1A-208ENST00000494728 NBPF9Q3BBW0 867 aa14.8□□□□□ -0.04
VTI1A-208ENST00000494728 LMBR1LQ6UX01 489 aa14.8□□□□□ -0.04
VTI1A-208ENST00000494728 FBXW7Q969H0 707 aa14.8□□□□□ -0.04
VTI1A-208ENST00000494728 MPHOSPH8Q99549 860 aa14.8□□□□□ -0.04
VTI1A-208ENST00000494728 COA1Q9GZY4 146 aa14.8□□□□□ -0.04
VTI1A-208ENST00000494728 GBA2Q9HCG7 927 aaPredicted RBP14.8□□□□□ -0.04
VTI1A-208ENST00000494728 CHMP3Q9Y3E7 222 aa14.8□□□□□ -0.04
VTI1A-208ENST00000494728 SLC4A10Q6U841 1118 aa14.79□□□□□ -0.04
VTI1A-208ENST00000494728 SULF1Q8IWU6 871 aa14.79□□□□□ -0.04
VTI1A-208ENST00000494728 MRPL50Q8N5N7 158 aaKnown RBP14.79□□□□□ -0.04
VTI1A-208ENST00000494728 SUCLG2Q96I99 432 aa14.79□□□□□ -0.04
VTI1A-208ENST00000494728 ANKRD2Q9GZV1 360 aa14.79□□□□□ -0.04
VTI1A-208ENST00000494728 MYH13Q9UKX3 1938 aa14.79□□□□□ -0.04
VTI1A-208ENST00000494728 OTOFQ9HC10 1997 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 SASH1O94885 1247 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 NBPF7P0C2Y1 421 aaPredicted RBP14.78□□□□□ -0.04
VTI1A-208ENST00000494728 MAP2K2P36507 400 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 IFIT5Q13325 482 aaKnown RBP14.78□□□□□ -0.04
VTI1A-208ENST00000494728 STRIP1Q5VSL9 837 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 CERS5Q8N5B7 392 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 CDCA7LQ96GN5 454 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 HTTP42858 3142 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 LAMB1P07942 1786 aa14.78□□□□□ -0.04
VTI1A-208ENST00000494728 PITPNM2Q9BZ72 1349 aa14.77□□□□□ -0.04
VTI1A-208ENST00000494728 ALDH1L1O75891 902 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 GTF2IP78347 998 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 PRAMEF18Q5VWM3 479 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 MOB2Q70IA6 237 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 KIAA0825Q8IV33 1275 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 SSH1Q8WYL5 1049 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 SRCIN1Q9C0H9 1055 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 CD209Q9NNX6 404 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 PCDHAC2Q9Y5I4 1007 aa14.77□□□□□ -0.05
VTI1A-208ENST00000494728 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-208ENST00000494728 UTYO14607 1347 aa14.76□□□□□ -0.05
VTI1A-208ENST00000494728 AOX1Q06278 1338 aa14.76□□□□□ -0.05
VTI1A-208ENST00000494728 WNT10BO00744 389 aa14.76□□□□□ -0.05
VTI1A-208ENST00000494728 KCNJ4P48050 445 aa14.76□□□□□ -0.05
VTI1A-208ENST00000494728 BRPF1P55201 1214 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-208ENST00000494728 SLFN5Q08AF3 891 aa14.76□□□□□ -0.05
VTI1A-208ENST00000494728 ZBED3Q96IU2 234 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-208ENST00000494728 PUS3Q9BZE2 481 aaKnown RBP14.76□□□□□ -0.05
VTI1A-208ENST00000494728 C9orf78Q9NZ63 289 aaPredicted RBP14.76□□□□□ -0.05
VTI1A-208ENST00000494728 JAG2Q9Y219 1238 aa14.76□□□□□ -0.05
VTI1A-208ENST00000494728 SSC5DA1L4H1 1573 aa14.76□□□□□ -0.05
VTI1A-208ENST00000494728 MYO3BQ8WXR4 1341 aa14.75□□□□□ -0.05
VTI1A-208ENST00000494728 NOGQ13253 232 aa14.75□□□□□ -0.05
VTI1A-208ENST00000494728 TTLL5Q6EMB2 1281 aa14.75□□□□□ -0.05
VTI1A-208ENST00000494728 RGMBQ6NW40 437 aa14.75□□□□□ -0.05
VTI1A-208ENST00000494728 C15orf52Q6ZUT6 534 aaKnown RBP14.75□□□□□ -0.05
VTI1A-208ENST00000494728 ANKRD44Q8N8A2 993 aa14.75□□□□□ -0.05
VTI1A-208ENST00000494728 BICC1Q9H694 974 aaKnown RBP14.75□□□□□ -0.05
VTI1A-208ENST00000494728 CENPFP49454 3210 aa14.74□□□□□ -0.05
VTI1A-208ENST00000494728 E9PSI1 815 aa14.74□□□□□ -0.05
VTI1A-208ENST00000494728 SLC10A3P09131 477 aa14.74□□□□□ -0.05
VTI1A-208ENST00000494728 CCDC57Q2TAC2 916 aa14.74□□□□□ -0.05
VTI1A-208ENST00000494728 LDHAL6AQ6ZMR3 332 aa14.74□□□□□ -0.05
VTI1A-208ENST00000494728 RASAL3Q86YV0 1011 aa14.74□□□□□ -0.05
VTI1A-208ENST00000494728 C2orf69Q8N8R5 385 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms