RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PAPPA2Q9BXP8 1791 aa15.1■□□□□ 0.01
CSNK1E-212ENST00000494610 ZBED9Q6R2W3 1325 aa15.1■□□□□ 0.01
CSNK1E-212ENST00000494610 USP17L3A6NCW0 530 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 USP17L4A6NCW7 530 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 PDE8AO60658 829 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 SASH1O94885 1247 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 KLRK1P26718 216 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 TTLL12Q14166 644 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 USP17L1Q7RTZ2 530 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 XDHP47989 1333 aa15.09■□□□□ 0.01
CSNK1E-212ENST00000494610 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
CSNK1E-212ENST00000494610 DACT2Q5SW24 774 aa15.08■□□□□ 0
CSNK1E-212ENST00000494610 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
CSNK1E-212ENST00000494610 TSPYL6Q8N831 410 aa15.08■□□□□ 0
CSNK1E-212ENST00000494610 GREM2Q9H772 168 aa15.08■□□□□ 0
CSNK1E-212ENST00000494610 CWC25Q9NXE8 425 aaPredicted RBP15.08■□□□□ 0
CSNK1E-212ENST00000494610 APAF1O14727 1248 aa15.07■□□□□ 0
CSNK1E-212ENST00000494610 IGKV5-2P06315 115 aa15.07■□□□□ 0
CSNK1E-212ENST00000494610 ATP2B4P23634 1241 aa15.07■□□□□ 0
CSNK1E-212ENST00000494610 CCDC191Q8NCU4 936 aa15.07■□□□□ 0
CSNK1E-212ENST00000494610 METTL22Q9BUU2 404 aaPredicted RBP15.07■□□□□ 0
CSNK1E-212ENST00000494610 HDAC9Q9UKV0 1011 aa15.07■□□□□ 0
CSNK1E-212ENST00000494610 MINPP1Q9UNW1 487 aa15.07■□□□□ 0
CSNK1E-212ENST00000494610 MAP3K2Q9Y2U5 619 aa15.07■□□□□ 0
CSNK1E-212ENST00000494610 SNAP23O00161 211 aa15.06■□□□□ 0
CSNK1E-212ENST00000494610 WNT10BO00744 389 aa15.06■□□□□ 0
CSNK1E-212ENST00000494610 PTPN12Q05209 780 aaKnown RBP15.06■□□□□ 0
CSNK1E-212ENST00000494610 CWF19L2Q2TBE0 894 aaKnown RBP15.06■□□□□ 0
CSNK1E-212ENST00000494610 TTLL11Q8NHH1 800 aa15.06■□□□□ 0
CSNK1E-212ENST00000494610 PCDHAC2Q9Y5I4 1007 aa15.06■□□□□ 0
CSNK1E-212ENST00000494610 ZNF609O15014 1411 aa15.06■□□□□ 0
CSNK1E-212ENST00000494610 CTSWP56202 376 aa15.05■□□□□ -0
CSNK1E-212ENST00000494610 FKBP1BP68106 108 aa15.05■□□□□ -0
CSNK1E-212ENST00000494610 PODNQ7Z5L7 613 aa15.05■□□□□ -0
CSNK1E-212ENST00000494610 PITPNM2Q9BZ72 1349 aa15.05■□□□□ -0
CSNK1E-212ENST00000494610 PI4KAP2A4QPH2 592 aa15.04■□□□□ -0
CSNK1E-212ENST00000494610 GPR25O00155 361 aa15.04■□□□□ -0
CSNK1E-212ENST00000494610 CCT4P50991 539 aaKnown RBP15.04■□□□□ -0
CSNK1E-212ENST00000494610 G2E3Q7L622 706 aa15.04■□□□□ -0
CSNK1E-212ENST00000494610 PI4KAP1Q8N8J0 262 aa15.04■□□□□ -0
CSNK1E-212ENST00000494610 MED23Q9ULK4 1368 aa15.03■□□□□ -0
CSNK1E-212ENST00000494610 AOX1Q06278 1338 aa15.03■□□□□ -0
CSNK1E-212ENST00000494610 TM4SF4P48230 202 aa15.03■□□□□ -0
CSNK1E-212ENST00000494610 PRPF38BQ5VTL8 546 aaKnown RBP15.03■□□□□ -0
CSNK1E-212ENST00000494610 KIAA0825Q8IV33 1275 aa15.03■□□□□ -0
CSNK1E-212ENST00000494610 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
CSNK1E-212ENST00000494610 IFT57Q9NWB7 429 aa15.03■□□□□ -0
CSNK1E-212ENST00000494610 MYH3P11055 1940 aa15.02■□□□□ -0
CSNK1E-212ENST00000494610 BSDC1Q9NW68 430 aaPredicted RBP15.02■□□□□ -0
CSNK1E-212ENST00000494610 PCDH10Q9P2E7 1040 aa15.02■□□□□ -0
CSNK1E-212ENST00000494610 GNAI1P63096 354 aa15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 GTF2IP78347 998 aa15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 UBE3BQ7Z3V4 1068 aa15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 REM2Q8IYK8 340 aaPredicted RBP15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 CLMNQ96JQ2 1002 aa15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 CDC5LQ99459 802 aaKnown RBP15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 ANGEL1Q9UNK9 670 aaKnown RBP15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 JAG2Q9Y219 1238 aa15.01□□□□□ -0.01
CSNK1E-212ENST00000494610 NEURL1BA8MQ27 555 aa15□□□□□ -0.01
CSNK1E-212ENST00000494610 CCDC27Q2M243 656 aa15□□□□□ -0.01
CSNK1E-212ENST00000494610 STRIP1Q5VSL9 837 aa15□□□□□ -0.01
CSNK1E-212ENST00000494610 TTLL5Q6EMB2 1281 aa15□□□□□ -0.01
CSNK1E-212ENST00000494610 KSR2Q6VAB6 950 aa15□□□□□ -0.01
CSNK1E-212ENST00000494610 OGFOD1Q8N543 542 aa15□□□□□ -0.01
CSNK1E-212ENST00000494610 CERS5Q8N5B7 392 aa15□□□□□ -0.01
CSNK1E-212ENST00000494610 SSC5DA1L4H1 1573 aa14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 FKTNO75072 461 aa14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 HSP90B1P14625 803 aaKnown RBP14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 CAP1Q01518 475 aa14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 LDLRAD1Q5T700 205 aa14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 CCDC30Q5VVM6 783 aa14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 SPRYD7Q5W111 196 aa14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 FBXO46Q6PJ61 603 aaPredicted RBP14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 HELBQ8NG08 1087 aaPredicted RBP14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 COA1Q9GZY4 146 aa14.99□□□□□ -0.01
CSNK1E-212ENST00000494610 ZNF804BA4D1E1 1349 aa14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 POTEFA5A3E0 1075 aa14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 F8W031 263 aaPredicted RBP14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 H7C1W4 665 aa14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 TAF5LO75529 589 aa14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 DDX58O95786 925 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 ITGA6P23229 1130 aa14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 CALD1Q05682 793 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-212ENST00000494610 CLRN2A0PK11 232 aa14.97□□□□□ -0.01
CSNK1E-212ENST00000494610 IGF2BP3O00425 579 aaKnown RBP eCLIP14.97□□□□□ -0.01
CSNK1E-212ENST00000494610 NF2P35240 595 aa14.97□□□□□ -0.01
CSNK1E-212ENST00000494610 DEFB129Q9H1M3 183 aa14.97□□□□□ -0.01
CSNK1E-212ENST00000494610 IRS2Q9Y4H2 1338 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 SZT2Q5T011 3432 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 GJA5P36382 358 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 IGHMBP2P38935 993 aaKnown RBP14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 CASP7P55210 303 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 CHRNDQ07001 517 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 ARMC9Q7Z3E5 817 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 LEMD3Q9Y2U8 911 aa14.96□□□□□ -0.01
CSNK1E-212ENST00000494610 TRIM17Q9Y577 477 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms