RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 FGFR2P21802 821 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 PARP10Q53GL7 1025 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 CREB3L3Q68CJ9 461 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 SLC27A2O14975 620 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 SSFA2P28290 1259 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 IFIT5Q13325 482 aaKnown RBP13.23□□□□□ -0.29
ZIC4-216ENST00000494569 CHMP3Q9Y3E7 222 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 CHGBP05060 677 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 CLEC4GQ6UXB4 293 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
ZIC4-216ENST00000494569 PAG1Q9NWQ8 432 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 TAF1P21675 1872 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 LTBP1Q14766 1721 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 SLC27A3Q5K4L6 730 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 ZMYM1Q5SVZ6 1142 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 TRMT112Q9UI30 125 aaKnown RBP13.22□□□□□ -0.29
ZIC4-216ENST00000494569 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
ZIC4-216ENST00000494569 NDUFB9Q9Y6M9 179 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 UBR3Q6ZT12 1888 aa13.22□□□□□ -0.29
ZIC4-216ENST00000494569 TNRC6CQ9HCJ0 1690 aaKnown RBP13.22□□□□□ -0.29
ZIC4-216ENST00000494569 BRD1O95696 1058 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 ADORA1P30542 326 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 VPS53Q5VIR6 699 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 HELLSQ9NRZ9 838 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 XAGE2Q96GT9 111 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 UPF3BQ9BZI7 483 aaKnown RBP13.21□□□□□ -0.29
ZIC4-216ENST00000494569 BCL2L12Q9HB09 334 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 CEP126Q9P2H0 1117 aa13.21□□□□□ -0.29
ZIC4-216ENST00000494569 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
ZIC4-216ENST00000494569 CACNA1SQ13698 1873 aa13.21□□□□□ -0.3
ZIC4-216ENST00000494569 FOXP2O15409 715 aa13.21□□□□□ -0.3
ZIC4-216ENST00000494569 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.3
ZIC4-216ENST00000494569 ANKRD18BA2A2Z9 1011 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 AK2P54819 239 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 NUCB2P80303 420 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
ZIC4-216ENST00000494569 LMBRD1Q9NUN5 540 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 TAF6LQ9Y6J9 622 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 LRRC37AA6NMS7 1700 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 MYH13Q9UKX3 1938 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 LAMB1P07942 1786 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 BAG4O95429 457 aaKnown RBP13.2□□□□□ -0.3
ZIC4-216ENST00000494569 ZNF827Q17R98 1081 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 MCMDC2Q4G0Z9 681 aa13.2□□□□□ -0.3
ZIC4-216ENST00000494569 XRCC6P12956 609 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZIC4-216ENST00000494569 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
ZIC4-216ENST00000494569 PANK2Q9BZ23 570 aa13.19□□□□□ -0.3
ZIC4-216ENST00000494569 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
ZIC4-216ENST00000494569 SCARF1Q14162 830 aa13.19□□□□□ -0.3
ZIC4-216ENST00000494569 DDX46Q7L014 1031 aaKnown RBP13.19□□□□□ -0.3
ZIC4-216ENST00000494569 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
ZIC4-216ENST00000494569 POLD1P28340 1107 aa13.19□□□□□ -0.3
ZIC4-216ENST00000494569 ARID4AP29374 1257 aaPredicted RBP13.19□□□□□ -0.3
ZIC4-216ENST00000494569 SEC62Q99442 399 aaKnown RBP13.19□□□□□ -0.3
ZIC4-216ENST00000494569 MROH5Q6ZUA9 1318 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 TRAK2O60296 914 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 PDE8BO95263 885 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 IFIT1P09914 478 aaKnown RBP13.18□□□□□ -0.3
ZIC4-216ENST00000494569 GPR162Q16538 588 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
ZIC4-216ENST00000494569 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 CDK5RAP2Q96SN8 1893 aa13.18□□□□□ -0.3
ZIC4-216ENST00000494569 RRAGDQ9NQL2 400 aaPredicted RBP13.18□□□□□ -0.3
ZIC4-216ENST00000494569 DDX60LQ5H9U9 1706 aaKnown RBP13.17□□□□□ -0.3
ZIC4-216ENST00000494569 GOLIM4O00461 696 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 LIMCH1Q9UPQ0 1083 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 MAST3O60307 1309 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 RNF113AO15541 343 aaKnown RBP13.17□□□□□ -0.3
ZIC4-216ENST00000494569 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 LARGE1O95461 756 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
ZIC4-216ENST00000494569 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
ZIC4-216ENST00000494569 CPA1P15085 419 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
ZIC4-216ENST00000494569 PNPLA7Q6ZV29 1317 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 MCAMP43121 646 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 SF3B3Q15393 1217 aaKnown RBP13.16□□□□□ -0.3
ZIC4-216ENST00000494569 CCDC129Q6ZRS4 1044 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
ZIC4-216ENST00000494569 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 CCDC85AQ96PX6 553 aaPredicted RBP13.16□□□□□ -0.3
ZIC4-216ENST00000494569 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
ZIC4-216ENST00000494569 RPS6KB1P23443 525 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 TOB2Q14106 344 aaPredicted RBP13.16□□□□□ -0.3
ZIC4-216ENST00000494569 SLFNL1Q499Z3 407 aa13.16□□□□□ -0.3
ZIC4-216ENST00000494569 AMIGO3Q86WK7 504 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms