RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 IQCA1LA6NCM1 817 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 TOMM70O94826 608 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 PDE8BO95263 885 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 UBE4AQ14139 1066 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 PDE3AQ14432 1141 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 COA1Q9GZY4 146 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 SIL1Q9H173 461 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 TAF1DQ9H5J8 278 aaPredicted RBP29.22■■■□□ 2.27
CLIC3-203ENST00000494426 HACL1Q9UJ83 578 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 FBXO3Q9UK99 471 aa29.22■■■□□ 2.27
CLIC3-203ENST00000494426 ZNF646O15015 1829 aaPredicted RBP29.22■■■□□ 2.27
CLIC3-203ENST00000494426 CIAO1O76071 339 aa29.21■■■□□ 2.27
CLIC3-203ENST00000494426 GMPSP49915 693 aaPredicted RBP29.21■■■□□ 2.27
CLIC3-203ENST00000494426 EPS15P42566 896 aa29.2■■■□□ 2.26
CLIC3-203ENST00000494426 C1QTNF8P60827 252 aa29.2■■■□□ 2.26
CLIC3-203ENST00000494426 C16orf71Q8IYS4 520 aaPredicted RBP29.2■■■□□ 2.26
CLIC3-203ENST00000494426 ZBTB12Q9Y330 459 aaPredicted RBP29.2■■■□□ 2.26
CLIC3-203ENST00000494426 VIL1P09327 827 aaKnown RBP29.19■■■□□ 2.26
CLIC3-203ENST00000494426 ATP8B2P98198 1209 aa29.19■■■□□ 2.26
CLIC3-203ENST00000494426 CD209Q9NNX6 404 aa29.19■■■□□ 2.26
CLIC3-203ENST00000494426 EPHX2P34913 555 aa29.18■■■□□ 2.26
CLIC3-203ENST00000494426 RBM46Q8TBY0 533 aaKnown RBP29.18■■■□□ 2.26
CLIC3-203ENST00000494426 GPRC5DQ9NZD1 345 aa29.18■■■□□ 2.26
CLIC3-203ENST00000494426 DDX19BQ9UMR2 479 aa29.18■■■□□ 2.26
CLIC3-203ENST00000494426 POTEIP0CG38 1075 aa29.17■■■□□ 2.26
CLIC3-203ENST00000494426 POTEJP0CG39 1038 aa29.17■■■□□ 2.26
CLIC3-203ENST00000494426 FGFR2P21802 821 aa29.17■■■□□ 2.26
CLIC3-203ENST00000494426 POLA2Q14181 598 aa29.17■■■□□ 2.26
CLIC3-203ENST00000494426 LMOD1P29536 600 aaPredicted RBP29.16■■■□□ 2.26
CLIC3-203ENST00000494426 IL15P40933 162 aaPredicted RBP29.16■■■□□ 2.26
CLIC3-203ENST00000494426 SSH3Q8TE77 659 aa29.16■■■□□ 2.26
CLIC3-203ENST00000494426 ZBTB40Q9NUA8 1239 aa29.16■■■□□ 2.26
CLIC3-203ENST00000494426 SHTN1A0MZ66 631 aa29.15■■■□□ 2.26
CLIC3-203ENST00000494426 USP17L3A6NCW0 530 aa29.15■■■□□ 2.26
CLIC3-203ENST00000494426 USP17L4A6NCW7 530 aa29.15■■■□□ 2.26
CLIC3-203ENST00000494426 USP17L1Q7RTZ2 530 aa29.15■■■□□ 2.26
CLIC3-203ENST00000494426 FAM84BQ96KN1 310 aaPredicted RBP29.15■■■□□ 2.26
CLIC3-203ENST00000494426 ADAMTSL1Q8N6G6 1762 aa29.15■■■□□ 2.26
CLIC3-203ENST00000494426 IL1R1P14778 569 aa29.14■■■□□ 2.26
CLIC3-203ENST00000494426 GYG1P46976 350 aa29.14■■■□□ 2.26
CLIC3-203ENST00000494426 DPF2Q92785 391 aa29.14■■■□□ 2.26
CLIC3-203ENST00000494426 CNOT7Q9UIV1 285 aaKnown RBP29.14■■■□□ 2.26
CLIC3-203ENST00000494426 RRP1P56182 461 aaKnown RBP29.13■■■□□ 2.25
CLIC3-203ENST00000494426 PUM3Q15397 648 aaKnown RBP29.13■■■□□ 2.25
CLIC3-203ENST00000494426 CEP85Q6P2H3 762 aa29.13■■■□□ 2.25
CLIC3-203ENST00000494426 RSBN1LQ6PCB5 846 aaPredicted RBP29.13■■■□□ 2.25
CLIC3-203ENST00000494426 ZNF804AQ7Z570 1209 aa29.13■■■□□ 2.25
CLIC3-203ENST00000494426 CEP126Q9P2H0 1117 aa29.13■■■□□ 2.25
CLIC3-203ENST00000494426 ZNF609O15014 1411 aa29.12■■■□□ 2.25
CLIC3-203ENST00000494426 RPS12P25398 132 aaKnown RBP29.12■■■□□ 2.25
CLIC3-203ENST00000494426 DACT2Q5SW24 774 aa29.12■■■□□ 2.25
CLIC3-203ENST00000494426 GMLQ99445 158 aa29.12■■■□□ 2.25
CLIC3-203ENST00000494426 MXD3Q9BW11 206 aa29.12■■■□□ 2.25
CLIC3-203ENST00000494426 HIBADHP31937 336 aaKnown RBP29.11■■■□□ 2.25
CLIC3-203ENST00000494426 STRIP1Q5VSL9 837 aa29.11■■■□□ 2.25
CLIC3-203ENST00000494426 FBXO33Q7Z6M2 555 aa29.11■■■□□ 2.25
CLIC3-203ENST00000494426 PNMA8AQ86V59 439 aaPredicted RBP29.11■■■□□ 2.25
CLIC3-203ENST00000494426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.11■■■□□ 2.25
CLIC3-203ENST00000494426 GTF2IP78347 998 aa29.1■■■□□ 2.25
CLIC3-203ENST00000494426 EAPPQ56P03 285 aaPredicted RBP29.1■■■□□ 2.25
CLIC3-203ENST00000494426 IFFO2Q5TF58 517 aa29.1■■■□□ 2.25
CLIC3-203ENST00000494426 TTLL5Q6EMB2 1281 aa29.1■■■□□ 2.25
CLIC3-203ENST00000494426 MICALL2Q8IY33 904 aa29.1■■■□□ 2.25
CLIC3-203ENST00000494426 AGBL3Q8NEM8 1001 aa29.1■■■□□ 2.25
CLIC3-203ENST00000494426 TDRD7Q8NHU6 1098 aaKnown RBP29.1■■■□□ 2.25
CLIC3-203ENST00000494426 ADARB2Q9NS39 739 aaKnown RBP29.1■■■□□ 2.25
CLIC3-203ENST00000494426 FSTL1Q12841 308 aa29.09■■■□□ 2.25
CLIC3-203ENST00000494426 LDHDQ86WU2 507 aa29.09■■■□□ 2.25
CLIC3-203ENST00000494426 SMC1BQ8NDV3 1235 aa29.09■■■□□ 2.25
CLIC3-203ENST00000494426 LPIN2Q92539 896 aa29.09■■■□□ 2.25
CLIC3-203ENST00000494426 IFIT1P09914 478 aaKnown RBP29.08■■■□□ 2.25
CLIC3-203ENST00000494426 TFCP2Q12800 502 aa29.08■■■□□ 2.25
CLIC3-203ENST00000494426 USP50Q70EL3 339 aaPredicted RBP29.08■■■□□ 2.25
CLIC3-203ENST00000494426 FBXW7Q969H0 707 aa29.08■■■□□ 2.25
CLIC3-203ENST00000494426 HIRAP54198 1017 aaPredicted RBP29.07■■■□□ 2.24
CLIC3-203ENST00000494426 ATP2B3Q16720 1220 aa29.07■■■□□ 2.24
CLIC3-203ENST00000494426 CHADLQ6NUI6 762 aa29.07■■■□□ 2.24
CLIC3-203ENST00000494426 CHMP4BQ9H444 224 aaKnown RBP29.07■■■□□ 2.24
CLIC3-203ENST00000494426 H7C1D1 291 aa29.06■■■□□ 2.24
CLIC3-203ENST00000494426 SASH1O94885 1247 aa29.06■■■□□ 2.24
CLIC3-203ENST00000494426 SLC5A1P13866 664 aa29.06■■■□□ 2.24
CLIC3-203ENST00000494426 BCAMP50895 628 aa29.06■■■□□ 2.24
CLIC3-203ENST00000494426 G3BP1Q13283 466 aaKnown RBP eCLIP29.06■■■□□ 2.24
CLIC3-203ENST00000494426 SAMD7Q7Z3H4 446 aa29.06■■■□□ 2.24
CLIC3-203ENST00000494426 TRPM4Q8TD43 1214 aa29.06■■■□□ 2.24
CLIC3-203ENST00000494426 NOP58Q9Y2X3 529 aaKnown RBP29.06■■■□□ 2.24
CLIC3-203ENST00000494426 EGFRP00533 1210 aa29.05■■■□□ 2.24
CLIC3-203ENST00000494426 CAVIN4Q5BKX8 364 aa29.05■■■□□ 2.24
CLIC3-203ENST00000494426 SIRT2Q8IXJ6 389 aa29.05■■■□□ 2.24
CLIC3-203ENST00000494426 CLEC11AQ9Y240 323 aa29.05■■■□□ 2.24
CLIC3-203ENST00000494426 FAM205AQ6ZU69 1335 aa29.04■■■□□ 2.24
CLIC3-203ENST00000494426 ARAP2Q8WZ64 1704 aa29.04■■■□□ 2.24
CLIC3-203ENST00000494426 SURF6O75683 361 aaKnown RBP29.04■■■□□ 2.24
CLIC3-203ENST00000494426 RPAP2Q8IXW5 612 aaPredicted RBP29.04■■■□□ 2.24
CLIC3-203ENST00000494426 CERS5Q8N5B7 392 aa29.04■■■□□ 2.24
CLIC3-203ENST00000494426 JAG2Q9Y219 1238 aa29.04■■■□□ 2.24
CLIC3-203ENST00000494426 ZNF280AP59817 542 aaPredicted RBP29.03■■■□□ 2.24
CLIC3-203ENST00000494426 TIMM10P62072 90 aa29.03■■■□□ 2.24
CLIC3-203ENST00000494426 MYO3BQ8WXR4 1341 aa29.02■■■□□ 2.24
CLIC3-203ENST00000494426 TBC1D10BQ4KMP7 808 aaPredicted RBP29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms