RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 CDC37L1Q7L3B6 337 aa9.09□□□□□ -0.95
RBM39-239ENST00000494274 ZC3H15Q8WU90 426 aaKnown RBP9.09□□□□□ -0.95
RBM39-239ENST00000494274 DCPSQ96C86 337 aaKnown RBP9.09□□□□□ -0.95
RBM39-239ENST00000494274 PGAP2Q9UHJ9 254 aa9.09□□□□□ -0.95
RBM39-239ENST00000494274 MED23Q9ULK4 1368 aa9.09□□□□□ -0.95
RBM39-239ENST00000494274 ARFGEF2Q9Y6D5 1785 aa9.09□□□□□ -0.95
RBM39-239ENST00000494274 TIAM2Q8IVF5 1701 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 IPO8O15397 1037 aaKnown RBP9.08□□□□□ -0.96
RBM39-239ENST00000494274 CELF2O95319 508 aaKnown RBP9.08□□□□□ -0.96
RBM39-239ENST00000494274 UBTFL1P0CB47 393 aaPredicted RBP9.08□□□□□ -0.96
RBM39-239ENST00000494274 SCARF1Q14162 830 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 STRIP1Q5VSL9 837 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 CST9Q5W186 159 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 KRT26Q7Z3Y9 468 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 OGFOD1Q8N543 542 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 ANKRD44Q8N8A2 993 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 KLHDC4Q8TBB5 520 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 CD209Q9NNX6 404 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 ANKRD36CQ5JPF3 1778 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 CACNA1SQ13698 1873 aa9.08□□□□□ -0.96
RBM39-239ENST00000494274 VEGFBP49765 207 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 BRPF1P55201 1214 aaPredicted RBP9.07□□□□□ -0.96
RBM39-239ENST00000494274 RABL6Q3YEC7 729 aaPredicted RBP9.07□□□□□ -0.96
RBM39-239ENST00000494274 LRRC24Q50LG9 513 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 METTL24Q5JXM2 366 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 DACT2Q5SW24 774 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 PPP4R3CPQ6ZMV5 832 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 ZNF804AQ7Z570 1209 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 GMLQ99445 158 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 MYOZ2Q9NPC6 264 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 JAG2Q9Y219 1238 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 RIPOR2Q9Y4F9 1068 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 DDX60Q8IY21 1712 aaKnown RBP9.07□□□□□ -0.96
RBM39-239ENST00000494274 DUOX1Q9NRD9 1551 aa9.07□□□□□ -0.96
RBM39-239ENST00000494274 ASTN2O75129 1339 aaPredicted RBP9.06□□□□□ -0.96
RBM39-239ENST00000494274 KIF16BQ96L93 1317 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 F8W031 263 aaPredicted RBP9.06□□□□□ -0.96
RBM39-239ENST00000494274 GYG1P46976 350 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 ZNF280AP59817 542 aaPredicted RBP9.06□□□□□ -0.96
RBM39-239ENST00000494274 UBE4AQ14139 1066 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 ANGEL2Q5VTE6 544 aaKnown RBP9.06□□□□□ -0.96
RBM39-239ENST00000494274 C15orf52Q6ZUT6 534 aaKnown RBP9.06□□□□□ -0.96
RBM39-239ENST00000494274 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 KIAA0825Q8IV33 1275 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 SULF1Q8IWU6 871 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 GGA3Q9NZ52 723 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 SCAF8Q9UPN6 1271 aaKnown RBP9.06□□□□□ -0.96
RBM39-239ENST00000494274 HDAC5Q9UQL6 1122 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 TNNQ9UQP3 1299 aa9.06□□□□□ -0.96
RBM39-239ENST00000494274 LRRFIP2Q9Y608 721 aaKnown RBP9.06□□□□□ -0.96
RBM39-239ENST00000494274 MROH5Q6ZUA9 1318 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 CCDC88AQ3V6T2 1871 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 ADM5C9JUS6 153 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 FRAT2O75474 233 aaPredicted RBP9.05□□□□□ -0.96
RBM39-239ENST00000494274 TRIM27P14373 513 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 HIBADHP31937 336 aaKnown RBP9.05□□□□□ -0.96
RBM39-239ENST00000494274 NBPF9Q3BBW0 867 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 ZKSCAN2Q63HK3 967 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 FAM84BQ96KN1 310 aaPredicted RBP9.05□□□□□ -0.96
RBM39-239ENST00000494274 MEIS3Q99687 375 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 SIL1Q9H173 461 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 HDAC9Q9UKV0 1011 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 IQSEC3Q9UPP2 1182 aaPredicted RBP9.05□□□□□ -0.96
RBM39-239ENST00000494274 CEP350Q5VT06 3117 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 MYO3BQ8WXR4 1341 aa9.05□□□□□ -0.96
RBM39-239ENST00000494274 TAF1P21675 1872 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 CNTNAP1P78357 1384 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 RASSF10A6NK89 507 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 EYA2O00167 538 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 SASH1O94885 1247 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 PDE8BO95263 885 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 GNAI3P08754 354 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
RBM39-239ENST00000494274 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
RBM39-239ENST00000494274 IL1R1P14778 569 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 RBM5P52756 815 aaKnown RBP eCLIP9.04□□□□□ -0.96
RBM39-239ENST00000494274 PTPN12Q05209 780 aaKnown RBP9.04□□□□□ -0.96
RBM39-239ENST00000494274 CAVIN4Q5BKX8 364 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 PRAMEF18Q5VWM3 479 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 INTS3Q68E01 1043 aaKnown RBP9.04□□□□□ -0.96
RBM39-239ENST00000494274 CYP4F22Q6NT55 531 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 ATF7IPQ6VMQ6 1270 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 SAPCD2Q86UD0 394 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 TLL2Q9Y6L7 1015 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 LAMB2P55268 1798 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 WDR33Q9C0J8 1336 aaKnown RBP9.04□□□□□ -0.96
RBM39-239ENST00000494274 IRS2Q9Y4H2 1338 aa9.04□□□□□ -0.96
RBM39-239ENST00000494274 DICER1Q9UPY3 1922 aaKnown RBP9.03□□□□□ -0.96
RBM39-239ENST00000494274 WNT10BO00744 389 aa9.03□□□□□ -0.96
RBM39-239ENST00000494274 IFIT1P09914 478 aaKnown RBP9.03□□□□□ -0.96
RBM39-239ENST00000494274 ECE1P42892 770 aa9.03□□□□□ -0.96
RBM39-239ENST00000494274 RFX5P48382 616 aaPredicted RBP9.03□□□□□ -0.96
RBM39-239ENST00000494274 BCAMP50895 628 aa9.03□□□□□ -0.96
RBM39-239ENST00000494274 HUNKP57058 714 aa9.03□□□□□ -0.96
RBM39-239ENST00000494274 CHAF1AQ13111 956 aaPredicted RBP9.03□□□□□ -0.96
RBM39-239ENST00000494274 DLGAP5Q15398 846 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms