RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 C16orf71Q8IYS4 520 aaPredicted RBP8.29□□□□□ -1.08
EPHA3-203ENST00000494014 ZRANB2O95218 330 aaKnown RBP eCLIP8.28□□□□□ -1.08
EPHA3-203ENST00000494014 TPM1P09493 284 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 SRLQ86TD4 932 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 LRRC8AQ8IWT6 810 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 CCDC191Q8NCU4 936 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 FBXO18Q8NFZ0 1043 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 NEK11Q8NG66 645 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 CBX8Q9HC52 389 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.28□□□□□ -1.08
EPHA3-203ENST00000494014 C1QTNF8P60827 252 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 SARM1Q6SZW1 724 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 ATG3Q9NT62 314 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 NRBP1Q9UHY1 535 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 ZC3H4Q9UPT8 1303 aaKnown RBP8.28□□□□□ -1.08
EPHA3-203ENST00000494014 PLEKHO1Q53GL0 409 aaPredicted RBP8.28□□□□□ -1.08
EPHA3-203ENST00000494014 LUZP1Q86V48 1076 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 LINC00116Q8NCU8 138 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 LTV1Q96GA3 475 aaPredicted RBP8.28□□□□□ -1.08
EPHA3-203ENST00000494014 MRFAP1L1Q96HT8 127 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 UBXN6Q9BZV1 441 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 TMOD3Q9NYL9 352 aa8.28□□□□□ -1.08
EPHA3-203ENST00000494014 AFDNP55196 1824 aaKnown RBP8.28□□□□□ -1.08
EPHA3-203ENST00000494014 LAMB4A4D0S4 1761 aa8.27□□□□□ -1.08
EPHA3-203ENST00000494014 N4BP2Q86UW6 1770 aaPredicted RBP8.27□□□□□ -1.08
EPHA3-203ENST00000494014 IVLP07476 585 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 SYT1P21579 422 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 GNAI1P63096 354 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 DHX8Q14562 1220 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 OTUD7AQ8TE49 926 aaPredicted RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 EXOC4Q96A65 974 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 DDX19AQ9NUU7 478 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 SMC3Q9UQE7 1217 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 HMMRO75330 724 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 LMOD3Q0VAK6 560 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 RBM43Q6ZSC3 357 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 NOL8Q76FK4 1167 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 CCAR2Q8N163 923 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 NFATC2IPQ8NCF5 419 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 SRRTQ9BXP5 876 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 BCCIPQ9P287 314 aaKnown RBP eCLIP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 PALD1Q9ULE6 856 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 RRP15Q9Y3B9 282 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 SBF1O95248 1867 aa8.27□□□□□ -1.09
EPHA3-203ENST00000494014 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
EPHA3-203ENST00000494014 LOC102724159A0A0B4J2E5 919 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 RPS6KA4O75676 772 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 IL13P35225 146 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 PDE1AP54750 535 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 PWP2Q15269 919 aaKnown RBP8.26□□□□□ -1.09
EPHA3-203ENST00000494014 TTC31Q49AM3 519 aaPredicted RBP8.26□□□□□ -1.09
EPHA3-203ENST00000494014 ANO6Q4KMQ2 910 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 TNMDQ9H2S6 317 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 JRKLQ9Y4A0 524 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 SKILP12757 684 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 YBX3P16989 372 aaKnown RBP eCLIP8.26□□□□□ -1.09
EPHA3-203ENST00000494014 GSDMDP57764 484 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 ERCC6LQ2NKX8 1250 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 CEP85Q6P2H3 762 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 SMARCE1Q969G3 411 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 DEF6Q9H4E7 631 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 ANO2Q9NQ90 1003 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 MAGEA9P43362 315 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 NLGN1Q8N2Q7 840 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 ZBTB9Q96C00 473 aa8.26□□□□□ -1.09
EPHA3-203ENST00000494014 FCHSD2O94868 740 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 KCNJ6P48051 423 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 ZNF165P49910 485 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 KRT85P78386 507 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 ITPK1Q13572 414 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 SNW1Q13573 536 aaKnown RBP8.25□□□□□ -1.09
EPHA3-203ENST00000494014 CCDC144BQ3MJ40 725 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 ARHGAP29Q52LW3 1261 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 CCDC93Q567U6 631 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 USHBP1Q8N6Y0 703 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 NLGN2Q8NFZ4 835 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 LIMCH1Q9UPQ0 1083 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.25□□□□□ -1.09
EPHA3-203ENST00000494014 USP27XA6NNY8 438 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 GOLGA6L19H0YKK7 550 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 TRIM66O15016 1216 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 POLR3GO15318 223 aaPredicted RBP8.25□□□□□ -1.09
EPHA3-203ENST00000494014 FBLN1P23142 703 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 DNM1Q05193 864 aaKnown RBP8.25□□□□□ -1.09
EPHA3-203ENST00000494014 UBXN4Q92575 508 aa8.25□□□□□ -1.09
EPHA3-203ENST00000494014 OAS2P29728 719 aaKnown RBP8.24□□□□□ -1.09
EPHA3-203ENST00000494014 HSPA4P34932 840 aa8.24□□□□□ -1.09
EPHA3-203ENST00000494014 ACTN2P35609 894 aa8.24□□□□□ -1.09
EPHA3-203ENST00000494014 CCZ1BP86790 482 aa8.24□□□□□ -1.09
EPHA3-203ENST00000494014 CCZ1P86791 482 aaPredicted RBP8.24□□□□□ -1.09
EPHA3-203ENST00000494014 AKAP4Q5JQC9 854 aa8.24□□□□□ -1.09
EPHA3-203ENST00000494014 CCDC91Q7Z6B0 441 aa8.24□□□□□ -1.09
EPHA3-203ENST00000494014 UPF3BQ9BZI7 483 aaKnown RBP8.24□□□□□ -1.09
EPHA3-203ENST00000494014 ORC3Q9UBD5 711 aaPredicted RBP8.24□□□□□ -1.09
EPHA3-203ENST00000494014 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
EPHA3-203ENST00000494014 CCDC69A6NI79 296 aa8.24□□□□□ -1.09
EPHA3-203ENST00000494014 CCP110O43303 1012 aa8.24□□□□□ -1.09
EPHA3-203ENST00000494014 NRDCO43847 1150 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms