RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
ACTB-213ENST00000493945 WASHC4Q2M389 1173 aa18.29■□□□□ 0.52
ACTB-213ENST00000493945 CCDC158Q5M9N0 1113 aa18.29■□□□□ 0.52
ACTB-213ENST00000493945 CHD1LQ86WJ1 897 aa18.29■□□□□ 0.52
ACTB-213ENST00000493945 IL1RAPL2Q9NP60 686 aa18.29■□□□□ 0.52
ACTB-213ENST00000493945 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
ACTB-213ENST00000493945 MYH13Q9UKX3 1938 aa18.28■□□□□ 0.52
ACTB-213ENST00000493945 NUCB1Q02818 461 aa18.28■□□□□ 0.52
ACTB-213ENST00000493945 C15orf52Q6ZUT6 534 aaKnown RBP18.28■□□□□ 0.52
ACTB-213ENST00000493945 PPIP5K2O43314 1243 aa18.27■□□□□ 0.52
ACTB-213ENST00000493945 ARHGAP27Q6ZUM4 889 aa18.27■□□□□ 0.52
ACTB-213ENST00000493945 JDP2Q8WYK2 163 aa18.27■□□□□ 0.52
ACTB-213ENST00000493945 ERC2O15083 957 aa18.26■□□□□ 0.51
ACTB-213ENST00000493945 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
ACTB-213ENST00000493945 UQCRFS1P1P0C7P4 283 aa18.26■□□□□ 0.51
ACTB-213ENST00000493945 FGFR2P21802 821 aa18.26■□□□□ 0.51
ACTB-213ENST00000493945 BCL11AQ9H165 835 aa18.26■□□□□ 0.51
ACTB-213ENST00000493945 DUOX1Q9NRD9 1551 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 SEMA3EO15041 775 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 HIBADHP31937 336 aaKnown RBP18.25■□□□□ 0.51
ACTB-213ENST00000493945 IARSP41252 1262 aaKnown RBP18.25■□□□□ 0.51
ACTB-213ENST00000493945 KIAA2012Q0VF49 1180 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 TTC39AQ5SRH9 613 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 LARGE2Q8N3Y3 721 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 XAGE2Q96GT9 111 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 LNPKQ9C0E8 428 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 COA1Q9GZY4 146 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 POLLQ9UGP5 575 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 CHD4Q14839 1912 aa18.25■□□□□ 0.51
ACTB-213ENST00000493945 TTC41PQ6P2S7 1318 aa18.24■□□□□ 0.51
ACTB-213ENST00000493945 SNED1Q8TER0 1413 aa18.24■□□□□ 0.51
ACTB-213ENST00000493945 MX1P20591 662 aa18.23■□□□□ 0.51
ACTB-213ENST00000493945 LMNB1P20700 586 aa18.23■□□□□ 0.51
ACTB-213ENST00000493945 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
ACTB-213ENST00000493945 EAF2Q96CJ1 260 aaPredicted RBP18.23■□□□□ 0.51
ACTB-213ENST00000493945 DICER1Q9UPY3 1922 aaKnown RBP18.23■□□□□ 0.51
ACTB-213ENST00000493945 AOX1Q06278 1338 aa18.23■□□□□ 0.51
ACTB-213ENST00000493945 SMARCA5O60264 1052 aaPredicted RBP18.22■□□□□ 0.51
ACTB-213ENST00000493945 TIMM10P62072 90 aa18.22■□□□□ 0.51
ACTB-213ENST00000493945 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
ACTB-213ENST00000493945 CCDC8Q9H0W5 538 aaPredicted RBP18.22■□□□□ 0.51
ACTB-213ENST00000493945 ECHDC1Q9NTX5 307 aa18.22■□□□□ 0.51
ACTB-213ENST00000493945 CCDC88AQ3V6T2 1871 aa18.21■□□□□ 0.51
ACTB-213ENST00000493945 NFKBIEO00221 500 aa18.21■□□□□ 0.51
ACTB-213ENST00000493945 RIMBP2O15034 1052 aa18.21■□□□□ 0.51
ACTB-213ENST00000493945 YBX3P16989 372 aaKnown RBP eCLIP18.21■□□□□ 0.514e-46■□□□□ 9.9
ACTB-213ENST00000493945 AOC3Q16853 763 aa18.21■□□□□ 0.51
ACTB-213ENST00000493945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.21■□□□□ 0.51
ACTB-213ENST00000493945 ZNF512BQ96KM6 892 aaPredicted RBP18.21■□□□□ 0.51
ACTB-213ENST00000493945 DBNDD2Q9BQY9 259 aa18.21■□□□□ 0.51
ACTB-213ENST00000493945 ZNF277Q9NRM2 450 aaPredicted RBP18.21■□□□□ 0.51
ACTB-213ENST00000493945 DBNLQ9UJU6 430 aaKnown RBP18.21■□□□□ 0.51
ACTB-213ENST00000493945 DENND2AQ9ULE3 1009 aa18.21■□□□□ 0.51
ACTB-213ENST00000493945 ZBTB22O15209 634 aa18.2■□□□□ 0.5
ACTB-213ENST00000493945 GLRX3O76003 335 aaKnown RBP18.2■□□□□ 0.5
ACTB-213ENST00000493945 CCDC102BQ68D86 513 aa18.2■□□□□ 0.5
ACTB-213ENST00000493945 ZGPATQ8N5A5 531 aaKnown RBP18.2■□□□□ 0.5
ACTB-213ENST00000493945 PDS5AQ29RF7 1337 aaKnown RBP18.2■□□□□ 0.5
ACTB-213ENST00000493945 ZC3H4Q9UPT8 1303 aaKnown RBP18.2■□□□□ 0.5
ACTB-213ENST00000493945 GYG1P46976 350 aa18.19■□□□□ 0.5
ACTB-213ENST00000493945 EIF6P56537 245 aaKnown RBP18.19■□□□□ 0.5
ACTB-213ENST00000493945 RASSF7Q02833 373 aa18.19■□□□□ 0.5
ACTB-213ENST00000493945 FBXO33Q7Z6M2 555 aa18.19■□□□□ 0.5
ACTB-213ENST00000493945 TBC1D22AQ8WUA7 517 aa18.19■□□□□ 0.5
ACTB-213ENST00000493945 SBF1O95248 1867 aa18.18■□□□□ 0.5
ACTB-213ENST00000493945 TIAM2Q8IVF5 1701 aa18.18■□□□□ 0.5
ACTB-213ENST00000493945 ECE2O60344 883 aa18.18■□□□□ 0.5
ACTB-213ENST00000493945 IGSF3O75054 1194 aa18.18■□□□□ 0.5
ACTB-213ENST00000493945 IL1R1P14778 569 aa18.18■□□□□ 0.5
ACTB-213ENST00000493945 ARID4AP29374 1257 aaPredicted RBP18.18■□□□□ 0.5
ACTB-213ENST00000493945 ADORA1P30542 326 aa18.18■□□□□ 0.5
ACTB-213ENST00000493945 TTF1Q15361 905 aaPredicted RBP18.18■□□□□ 0.5
ACTB-213ENST00000493945 LRRFIP1Q32MZ4 808 aaKnown RBP18.18■□□□□ 0.5
ACTB-213ENST00000493945 FAM84BQ96KN1 310 aaPredicted RBP18.18■□□□□ 0.5
ACTB-213ENST00000493945 CD209Q9NNX6 404 aa18.18■□□□□ 0.5
ACTB-213ENST00000493945 BCAMP50895 628 aa18.17■□□□□ 0.5
ACTB-213ENST00000493945 WDR66Q8TBY9 1149 aa18.17■□□□□ 0.5
ACTB-213ENST00000493945 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
ACTB-213ENST00000493945 MYO3BQ8WXR4 1341 aa18.17■□□□□ 0.5
ACTB-213ENST00000493945 PSME4Q14997 1843 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 SNAP23O00161 211 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 ATP5JP18859 108 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 PHKA1P46020 1223 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 TNIP1Q15025 636 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 GPR101Q96P66 508 aaPredicted RBP18.16■□□□□ 0.5
ACTB-213ENST00000493945 DBNDD1Q9H9R9 158 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 TLR7Q9NYK1 1049 aaKnown RBP18.16■□□□□ 0.5
ACTB-213ENST00000493945 RNF181Q9P0P0 153 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 STAP2Q9UGK3 403 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 IRS2Q9Y4H2 1338 aa18.16■□□□□ 0.5
ACTB-213ENST00000493945 KLRK1P26718 216 aa18.15■□□□□ 0.5
ACTB-213ENST00000493945 PDE1AP54750 535 aa18.15■□□□□ 0.5
ACTB-213ENST00000493945 SPTY2D1Q68D10 685 aaPredicted RBP18.15■□□□□ 0.5
ACTB-213ENST00000493945 TDRD7Q8NHU6 1098 aaKnown RBP18.15■□□□□ 0.5
ACTB-213ENST00000493945 FBXW7Q969H0 707 aa18.15■□□□□ 0.5
ACTB-213ENST00000493945 OSBPL3Q9H4L5 887 aa18.15■□□□□ 0.5
ACTB-213ENST00000493945 AK9Q5TCS8 1911 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 USP17L3A6NCW0 530 aa18.14■□□□□ 0.49
ACTB-213ENST00000493945 USP17L4A6NCW7 530 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms