RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FAM9BQ8IZU0 186 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 TNS4Q8IZW8 715 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 ZIC5Q96T25 663 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 MXD3Q9BW11 206 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 THSD7BQ9C0I4 1608 aa10.35□□□□□ -0.75
HDAC6-234ENST00000493923 ADM5C9JUS6 153 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 SNAP23O00161 211 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 CELF2O95319 508 aaKnown RBP10.34□□□□□ -0.75
HDAC6-234ENST00000493923 VIL1P09327 827 aaKnown RBP10.34□□□□□ -0.75
HDAC6-234ENST00000493923 KLRK1P26718 216 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 GRM1Q13255 1194 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 GCKRQ14397 625 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
HDAC6-234ENST00000493923 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 CAPNS2Q96L46 248 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 STK31Q9BXU1 1019 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 ANKIB1Q9P2G1 1089 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 GGA1Q9UJY5 639 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 MINPP1Q9UNW1 487 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 TLL2Q9Y6L7 1015 aa10.34□□□□□ -0.75
HDAC6-234ENST00000493923 HSPA8P11142 646 aaKnown RBP10.33□□□□□ -0.76
HDAC6-234ENST00000493923 FAM161AQ3B820 660 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 EPHA10Q5JZY3 1008 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 WDR63Q8IWG1 891 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 DNAAF4Q8WXU2 420 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 DPF2Q92785 391 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 GMLQ99445 158 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 ZNF408Q9H9D4 720 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-234ENST00000493923 SCAF8Q9UPN6 1271 aaKnown RBP10.33□□□□□ -0.76
HDAC6-234ENST00000493923 A0A1B0GUL6 1792 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 XDHP47989 1333 aa10.33□□□□□ -0.76
HDAC6-234ENST00000493923 H7C1D1 291 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 LBX1P52954 281 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 FKBP5Q13451 457 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-234ENST00000493923 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
HDAC6-234ENST00000493923 SAPCD2Q86UD0 394 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 FAM43AQ8N2R8 423 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 EYA3Q99504 573 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 PLA2G12BQ9BX93 195 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 ZC3H12CQ9C0D7 883 aaKnown RBP10.32□□□□□ -0.76
HDAC6-234ENST00000493923 TSKSQ9UJT2 592 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 ZNF521Q96K83 1311 aa10.32□□□□□ -0.76
HDAC6-234ENST00000493923 CSF1RP07333 972 aa10.31□□□□□ -0.76
HDAC6-234ENST00000493923 FOXO4P98177 505 aa10.31□□□□□ -0.76
HDAC6-234ENST00000493923 NEXNQ0ZGT2 675 aa10.31□□□□□ -0.76
HDAC6-234ENST00000493923 BEND3Q5T5X7 828 aa10.31□□□□□ -0.76
HDAC6-234ENST00000493923 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-234ENST00000493923 ZC3H15Q8WU90 426 aaKnown RBP10.31□□□□□ -0.76
HDAC6-234ENST00000493923 BSDC1Q9NW68 430 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-234ENST00000493923 IRS2Q9Y4H2 1338 aa10.31□□□□□ -0.76
HDAC6-234ENST00000493923 CASP8AP2Q9UKL3 1982 aa10.3□□□□□ -0.76
HDAC6-234ENST00000493923 ITGA6P23229 1130 aa10.3□□□□□ -0.76
HDAC6-234ENST00000493923 ATP2B4P23634 1241 aa10.3□□□□□ -0.76
HDAC6-234ENST00000493923 RPS12P25398 132 aaKnown RBP10.3□□□□□ -0.76
HDAC6-234ENST00000493923 CCT4P50991 539 aaKnown RBP10.3□□□□□ -0.76
HDAC6-234ENST00000493923 ZNF280AP59817 542 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-234ENST00000493923 KIF4BQ2VIQ3 1234 aa10.3□□□□□ -0.76
HDAC6-234ENST00000493923 CDC37L1Q7L3B6 337 aa10.3□□□□□ -0.76
HDAC6-234ENST00000493923 HELBQ8NG08 1087 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-234ENST00000493923 LINS1Q8NG48 757 aa10.3□□□□□ -0.76
HDAC6-234ENST00000493923 CDC5LQ99459 802 aaKnown RBP10.3□□□□□ -0.76
HDAC6-234ENST00000493923 GGA3Q9NZ52 723 aa10.3□□□□□ -0.76
HDAC6-234ENST00000493923 PRKAR2AP13861 404 aaKnown RBP10.29□□□□□ -0.76
HDAC6-234ENST00000493923 HSP90B1P14625 803 aaKnown RBP10.29□□□□□ -0.76
HDAC6-234ENST00000493923 CTCFP49711 727 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-234ENST00000493923 KRT26Q7Z3Y9 468 aa10.29□□□□□ -0.76
HDAC6-234ENST00000493923 ZNF594Q96JF6 807 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-234ENST00000493923 ZNF609O15014 1411 aa10.29□□□□□ -0.76
HDAC6-234ENST00000493923 MED23Q9ULK4 1368 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 TAF5LO75529 589 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 CHRNDQ07001 517 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 SCARF1Q14162 830 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 DACT2Q5SW24 774 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 PRAMEF18Q5VWM3 479 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 MOB2Q70IA6 237 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 KAZALD1Q96I82 304 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 CHMP4AQ9BY43 222 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 PRDM10Q9NQV6 1147 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 PCDHAC2Q9Y5I4 1007 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 AOX1Q06278 1338 aa10.28□□□□□ -0.76
HDAC6-234ENST00000493923 FAM155AB1AL88 458 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-234ENST00000493923 G3V3G9 751 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 HUNKP57058 714 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 NBPF9Q3BBW0 867 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 DCAF8Q5TAQ9 597 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 ANGEL2Q5VTE6 544 aaKnown RBP10.27□□□□□ -0.77
HDAC6-234ENST00000493923 LMBR1LQ6UX01 489 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 AGBL3Q8NEM8 1001 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 AIDAQ96BJ3 306 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 CDCA5Q96FF9 252 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 SUCLG2Q96I99 432 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 MYOZ2Q9NPC6 264 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 ZNF804BA4D1E1 1349 aa10.27□□□□□ -0.77
HDAC6-234ENST00000493923 USP17L8P0C7I0 530 aa10.26□□□□□ -0.77
HDAC6-234ENST00000493923 IGHMBP2P38935 993 aaKnown RBP10.26□□□□□ -0.77
HDAC6-234ENST00000493923 MAP2K1Q02750 393 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms