RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 FPGT-TNNI3KV9GXZ4 949 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 GSPT1P15170 499 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 MCCP23508 829 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 TFCP2Q12800 502 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 AACSQ86V21 672 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 CNBD1Q8NA66 436 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 ZNF594Q96JF6 807 aaPredicted RBP8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 NLRP3Q96P20 1036 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 ECHDC1Q9NTX5 307 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 CEP126Q9P2H0 1117 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 CGNQ9P2M7 1197 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 AKAP2Q9Y2D5 859 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 RIPOR2Q9Y4F9 1068 aa8.69□□□□□ -1.02
SMARCE1-211ENST00000493660 MROH5Q6ZUA9 1318 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 TAF1P21675 1872 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 GLRX3O76003 335 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 ST5P78524 1137 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 HS1BP3Q53T59 392 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 PI4K2BQ8TCG2 481 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 EAF2Q96CJ1 260 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 LRRC37AA6NMS7 1700 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 POLRMTO00411 1230 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 CDC45O75419 566 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 SERPINB2P05120 415 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 IGHMBP2P38935 993 aaKnown RBP8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 LRRC24Q50LG9 513 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 SASS6Q6UVJ0 657 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 LDHAL6AQ6ZMR3 332 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 PPP1R9BQ96SB3 815 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 CNNM1Q9NRU3 951 aa8.68□□□□□ -1.02
SMARCE1-211ENST00000493660 EP400Q96L91 3159 aa8.67□□□□□ -1.02
SMARCE1-211ENST00000493660 PRR5LQ6MZQ0 368 aa8.67□□□□□ -1.02
SMARCE1-211ENST00000493660 PUS3Q9BZE2 481 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-211ENST00000493660 NPHP1O15259 732 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 ZNF500O60304 480 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 SDSP20132 328 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 DDR1Q08345 913 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 ANKRD18AQ8IVF6 992 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 VGLL2Q8N8G2 317 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 CEP120Q8N960 986 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 MPHOSPH8Q99549 860 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 MYH7P12883 1935 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 COL4A1P02462 1669 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 ATP5JP18859 108 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 CASC1Q6TDU7 716 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 DBNLQ9UJU6 430 aaKnown RBP8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 RFX7Q2KHR2 1363 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 COL11A2P13942 1736 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 DLEC1Q9Y238 1755 aa8.66□□□□□ -1.02
SMARCE1-211ENST00000493660 CCDC66A2RUB6 948 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 KLRG2A4D1S0 409 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 MYCNP04198 464 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 CRY2Q49AN0 593 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 C3orf67Q6ZVT6 689 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 CNTROBQ8N137 903 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 SEC31BQ9NQW1 1179 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 BSDC1Q9NW68 430 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 KIF13BQ9NQT8 1826 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 AKAP11Q9UKA4 1901 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 MYH13Q9UKX3 1938 aa8.65□□□□□ -1.02
SMARCE1-211ENST00000493660 A0A1B0GUL7 405 aa8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 PDE8BO95263 885 aa8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 PUM3Q15397 648 aaKnown RBP8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 ATP2B3Q16720 1220 aa8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 DDX46Q7L014 1031 aaKnown RBP8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 DEFB132Q7Z7B7 95 aa8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 SLC16A10Q8TF71 515 aa8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 TLR7Q9NYK1 1049 aaKnown RBP8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.03
SMARCE1-211ENST00000493660 ZBTB22O15209 634 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 FGFR2P21802 821 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 MCM4P33991 863 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 TBC1D9Q6ZT07 1266 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 LPIN2Q92539 896 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 ZNF512BQ96KM6 892 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 DBNDD2Q9BQY9 259 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 UPF2Q9HAU5 1272 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 DOCK2Q92608 1830 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 SLC5A1P13866 664 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 HOXA10P31260 410 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 RPS8P62241 208 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 GRAPQ13588 217 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 TSHZ3Q63HK5 1081 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 GRAPLQ8TC17 118 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 EVI5LQ96CN4 794 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 RBM17Q96I25 401 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 BRIP1Q9BX63 1249 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 ANTXR1Q9H6X2 564 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 EFCC1Q9HA90 598 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 TAOK2Q9UL54 1235 aa8.64□□□□□ -1.03
SMARCE1-211ENST00000493660 TRIM6-TRIM34B2RNG4 842 aa8.63□□□□□ -1.03
SMARCE1-211ENST00000493660 HIP1O00291 1037 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms