RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 EPS15P42566 896 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 CXCL9Q07325 125 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 KIAA2012Q0VF49 1180 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 KRTAP3-3Q9BYR6 98 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 KRTAP3-2Q9BYR7 98 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 VPS33BQ9H267 617 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 POLLQ9UGP5 575 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 ZNF521Q96K83 1311 aa13.61□□□□□ -0.23
COL6A3-214ENST00000493608 LRRC37AA6NMS7 1700 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 H7C1W4 665 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 RAD17O75943 681 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 GCKRQ14397 625 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 LTBP1Q14766 1721 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 LDHDQ86WU2 507 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 SPEF2Q9C093 1822 aa13.6□□□□□ -0.23
COL6A3-214ENST00000493608 DUOX1Q9NRD9 1551 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 YDJCA8MPS7 323 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 LMOD1P29536 600 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-214ENST00000493608 SCNN1DP51172 638 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 CTSWP56202 376 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
COL6A3-214ENST00000493608 ANKRD18AQ8IVF6 992 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 GREM2Q9H772 168 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 DBNDD1Q9H9R9 158 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 ANKIB1Q9P2G1 1089 aa13.59□□□□□ -0.23
COL6A3-214ENST00000493608 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.24
COL6A3-214ENST00000493608 PNMA8AQ86V59 439 aaPredicted RBP13.58□□□□□ -0.24
COL6A3-214ENST00000493608 LINS1Q8NG48 757 aa13.58□□□□□ -0.24
COL6A3-214ENST00000493608 TBC1D16Q8TBP0 767 aa13.58□□□□□ -0.24
COL6A3-214ENST00000493608 CDCA7LQ96GN5 454 aa13.58□□□□□ -0.24
COL6A3-214ENST00000493608 KCNQ5Q9NR82 932 aa13.58□□□□□ -0.24
COL6A3-214ENST00000493608 WTIPA6NIX2 430 aaPredicted RBP13.57□□□□□ -0.24
COL6A3-214ENST00000493608 GMPSP49915 693 aaPredicted RBP13.57□□□□□ -0.24
COL6A3-214ENST00000493608 KLRG1Q96E93 195 aa13.57□□□□□ -0.24
COL6A3-214ENST00000493608 SHTN1A0MZ66 631 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 UFL1O94874 794 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 ITGBL1O95965 494 aaPredicted RBP13.56□□□□□ -0.24
COL6A3-214ENST00000493608 CASP7P55210 303 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 SLFN5Q08AF3 891 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 TNIP1Q15025 636 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 BEND3Q5T5X7 828 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 SLC4A10Q6U841 1118 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 CNTROBQ8N137 903 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 CDC5LQ99459 802 aaKnown RBP13.56□□□□□ -0.24
COL6A3-214ENST00000493608 EYA3Q99504 573 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 BCL2L13Q9BXK5 485 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 ZC3H12CQ9C0D7 883 aaKnown RBP13.56□□□□□ -0.24
COL6A3-214ENST00000493608 GPRC5DQ9NZD1 345 aa13.56□□□□□ -0.24
COL6A3-214ENST00000493608 E9PSI1 815 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 CCER2I3L3R5 266 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 PSMD14O00487 310 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 ECE2O60344 883 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 SPNS2Q8IVW8 549 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 PODXL2Q9NZ53 605 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 GGA1Q9UJY5 639 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 ADAMTSL1Q8N6G6 1762 aa13.55□□□□□ -0.24
COL6A3-214ENST00000493608 ITGA6P23229 1130 aa13.54□□□□□ -0.24
COL6A3-214ENST00000493608 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL6A3-214ENST00000493608 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
COL6A3-214ENST00000493608 ARSIQ5FYB1 569 aa13.54□□□□□ -0.24
COL6A3-214ENST00000493608 MRPL50Q8N5N7 158 aaKnown RBP13.54□□□□□ -0.24
COL6A3-214ENST00000493608 CNOT7Q9UIV1 285 aaKnown RBP13.54□□□□□ -0.24
COL6A3-214ENST00000493608 MINPP1Q9UNW1 487 aa13.54□□□□□ -0.24
COL6A3-214ENST00000493608 PASKQ96RG2 1323 aa13.54□□□□□ -0.24
COL6A3-214ENST00000493608 SCN9AQ15858 1988 aa13.54□□□□□ -0.24
COL6A3-214ENST00000493608 CSF1RP07333 972 aa13.53□□□□□ -0.24
COL6A3-214ENST00000493608 USP50Q70EL3 339 aaPredicted RBP13.53□□□□□ -0.24
COL6A3-214ENST00000493608 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
COL6A3-214ENST00000493608 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
COL6A3-214ENST00000493608 BSDC1Q9NW68 430 aaPredicted RBP13.53□□□□□ -0.24
COL6A3-214ENST00000493608 MKRN1Q9UHC7 482 aaKnown RBP13.53□□□□□ -0.24
COL6A3-214ENST00000493608 CHMP3Q9Y3E7 222 aa13.53□□□□□ -0.24
COL6A3-214ENST00000493608 POLR2AP24928 1970 aaKnown RBP13.52□□□□□ -0.24
COL6A3-214ENST00000493608 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
COL6A3-214ENST00000493608 IGHMBP2P38935 993 aaKnown RBP13.52□□□□□ -0.25
COL6A3-214ENST00000493608 HIRAP54198 1017 aaPredicted RBP13.52□□□□□ -0.25
COL6A3-214ENST00000493608 FOXO4P98177 505 aa13.52□□□□□ -0.25
COL6A3-214ENST00000493608 EPHA10Q5JZY3 1008 aa13.52□□□□□ -0.25
COL6A3-214ENST00000493608 TMC2Q8TDI7 906 aa13.52□□□□□ -0.25
COL6A3-214ENST00000493608 SSH1Q8WYL5 1049 aa13.52□□□□□ -0.25
COL6A3-214ENST00000493608 XDHP47989 1333 aa13.52□□□□□ -0.25
COL6A3-214ENST00000493608 RTL9Q8NET4 1388 aa13.52□□□□□ -0.25
COL6A3-214ENST00000493608 H7C1D1 291 aa13.51□□□□□ -0.25
COL6A3-214ENST00000493608 TRPM4Q8TD43 1214 aa13.51□□□□□ -0.25
COL6A3-214ENST00000493608 KHSRPQ92945 711 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL6A3-214ENST00000493608 MPHOSPH8Q99549 860 aa13.51□□□□□ -0.25
COL6A3-214ENST00000493608 SRCIN1Q9C0H9 1055 aa13.51□□□□□ -0.25
COL6A3-214ENST00000493608 C9orf78Q9NZ63 289 aaPredicted RBP13.51□□□□□ -0.25
COL6A3-214ENST00000493608 ANKRD18BA2A2Z9 1011 aa13.5□□□□□ -0.25
COL6A3-214ENST00000493608 TMEM88BA6NKF7 163 aa13.5□□□□□ -0.25
COL6A3-214ENST00000493608 GRM8O00222 908 aa13.5□□□□□ -0.25
COL6A3-214ENST00000493608 TRAF5O00463 557 aa13.5□□□□□ -0.25
COL6A3-214ENST00000493608 SLC34A2O95436 690 aa13.5□□□□□ -0.25
COL6A3-214ENST00000493608 CCT4P50991 539 aaKnown RBP13.5□□□□□ -0.25
COL6A3-214ENST00000493608 VARS2Q5ST30 1063 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms