RNA–Protein interactions for RNA: ENST00000493412.1

DMD-227, Transcript of dystrophin, humanhuman

TSL 2

Gene DMD, Length 616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-227ENST00000493412 MAP4K3Q8IVH8 894 aa7.43□□□□□ -1.22
DMD-227ENST00000493412 CACTIN-AS1Q8N1I8 211 aa7.43□□□□□ -1.22
DMD-227ENST00000493412 GALNT11Q8NCW6 608 aa7.43□□□□□ -1.22
DMD-227ENST00000493412 FNDC3AQ9Y2H6 1198 aaKnown RBP7.43□□□□□ -1.22
DMD-227ENST00000493412 H3BRB1 525 aa7.42□□□□□ -1.22
DMD-227ENST00000493412 ERCC3P19447 782 aa7.42□□□□□ -1.22
DMD-227ENST00000493412 PRR23CQ6ZRP0 262 aa7.42□□□□□ -1.22
DMD-227ENST00000493412 HELQQ8TDG4 1101 aa7.42□□□□□ -1.22
DMD-227ENST00000493412 NUDT16Q96DE0 195 aaKnown RBP7.42□□□□□ -1.22
DMD-227ENST00000493412 RASSF4Q9H2L5 321 aa7.42□□□□□ -1.22
DMD-227ENST00000493412 TUT1Q9H6E5 874 aaKnown RBP7.42□□□□□ -1.22
DMD-227ENST00000493412 ZFP64Q9NPA5 681 aa7.42□□□□□ -1.22
DMD-227ENST00000493412 TMEM63CQ9P1W3 806 aa7.42□□□□□ -1.22
DMD-227ENST00000493412 LRP8Q14114 963 aa7.41□□□□□ -1.22
DMD-227ENST00000493412 PDE12Q6L8Q7 609 aaKnown RBP7.41□□□□□ -1.22
DMD-227ENST00000493412 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.41□□□□□ -1.22
DMD-227ENST00000493412 GLYCTKQ8IVS8 523 aa7.41□□□□□ -1.22
DMD-227ENST00000493412 CEP120Q8N960 986 aa7.41□□□□□ -1.22
DMD-227ENST00000493412 LACRTQ9GZZ8 138 aa7.41□□□□□ -1.22
DMD-227ENST00000493412 MUC3BQ9H195 1237 aa7.41□□□□□ -1.22
DMD-227ENST00000493412 PPME1Q9Y570 386 aa7.41□□□□□ -1.22
DMD-227ENST00000493412 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.41□□□□□ -1.22
DMD-227ENST00000493412 LINC01387J3KSC0 135 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 WISP1O95388 367 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 FKBP4Q02790 459 aaKnown RBP eCLIP7.4□□□□□ -1.22
DMD-227ENST00000493412 MTMR3Q13615 1198 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 ECM1Q16610 540 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 TTC39BQ5VTQ0 682 aaPredicted RBP7.4□□□□□ -1.22
DMD-227ENST00000493412 CEP135Q66GS9 1140 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 AGGF1Q8N302 714 aaeCLIP7.4□□□□□ -1.22
DMD-227ENST00000493412 ELP3Q9H9T3 547 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 KCNK4Q9NYG8 393 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 CNTN3Q9P232 1028 aa7.4□□□□□ -1.22
DMD-227ENST00000493412 RBM47A0AV96 593 aaKnown RBP7.39□□□□□ -1.23
DMD-227ENST00000493412 TXNDC11Q6PKC3 985 aa7.39□□□□□ -1.23
DMD-227ENST00000493412 PBX4Q9BYU1 374 aa7.39□□□□□ -1.23
DMD-227ENST00000493412 KANSL3Q9P2N6 904 aa7.39□□□□□ -1.23
DMD-227ENST00000493412 ANKRD33BA6NCL7 494 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 UNCXA6NJT0 531 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 SMNDC1O75940 238 aaKnown RBP eCLIP7.38□□□□□ -1.23
DMD-227ENST00000493412 EPHA1P21709 976 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 CDC27P30260 824 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 SF3B2Q13435 895 aaKnown RBP7.38□□□□□ -1.23
DMD-227ENST00000493412 XKR5Q6UX68 686 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 DCAF11Q8TEB1 546 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 EDEM1Q92611 657 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 SPACA7Q96KW9 195 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 GGNBP2Q9H3C7 697 aa7.38□□□□□ -1.23
DMD-227ENST00000493412 HYAL3O43820 417 aaPredicted RBP7.37□□□□□ -1.23
DMD-227ENST00000493412 PDGFAP04085 211 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 ACPPP15309 386 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 MPSTP25325 297 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 ZNF438Q7Z4V0 828 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 PSMG3-AS1Q96PY0 264 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 UBL7Q96S82 380 aaPredicted RBP7.37□□□□□ -1.23
DMD-227ENST00000493412 POP1Q99575 1024 aaKnown RBP7.37□□□□□ -1.23
DMD-227ENST00000493412 CARD10Q9BWT7 1032 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 ADAM19Q9H013 955 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 SALL4Q9UJQ4 1053 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
DMD-227ENST00000493412 A6NHS1 94 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 NFKBIEO00221 500 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 FSCN2O14926 492 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 ADAM11O75078 769 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 MAPK1P28482 360 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 CD68P34810 354 aaPredicted RBP7.36□□□□□ -1.23
DMD-227ENST00000493412 EIF1AXP47813 144 aaKnown RBP7.36□□□□□ -1.23
DMD-227ENST00000493412 ARHGAP4P98171 946 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 C1orf127Q8N9H9 656 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 CHRDQ9H2X0 955 aa7.36□□□□□ -1.23
DMD-227ENST00000493412 GLB1P16278 677 aa7.35□□□□□ -1.23
DMD-227ENST00000493412 FSTP19883 344 aa7.35□□□□□ -1.23
DMD-227ENST00000493412 KIAA1211Q6ZU35 1233 aa7.35□□□□□ -1.23
DMD-227ENST00000493412 NCAPG2Q86XI2 1143 aa7.35□□□□□ -1.23
DMD-227ENST00000493412 BCL2L13Q9BXK5 485 aa7.35□□□□□ -1.23
DMD-227ENST00000493412 SH2B1Q9NRF2 756 aaPredicted RBP7.35□□□□□ -1.23
DMD-227ENST00000493412 RPLP1P05386 114 aaKnown RBP7.34□□□□□ -1.23
DMD-227ENST00000493412 NPR3P17342 541 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 PTPRAP18433 802 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 MZF1P28698 734 aaPredicted RBP7.34□□□□□ -1.23
DMD-227ENST00000493412 CDC25BP30305 580 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 DNM1Q05193 864 aaKnown RBP7.34□□□□□ -1.23
DMD-227ENST00000493412 ACAD11Q709F0 780 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 NPAS4Q8IUM7 802 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 ARMC10Q8N2F6 343 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 DZANK1Q9NVP4 752 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 DCTN4Q9UJW0 460 aa7.34□□□□□ -1.23
DMD-227ENST00000493412 DDX3YO15523 660 aaKnown RBP7.33□□□□□ -1.24
DMD-227ENST00000493412 FAM13AO94988 1023 aa7.33□□□□□ -1.24
DMD-227ENST00000493412 ZNF16P17020 682 aaPredicted RBP7.33□□□□□ -1.24
DMD-227ENST00000493412 KLHL23Q8NBE8 558 aa7.33□□□□□ -1.24
DMD-227ENST00000493412 UBASH3BQ8TF42 649 aa7.33□□□□□ -1.24
DMD-227ENST00000493412 KLHDC7BQ96G42 594 aa7.33□□□□□ -1.24
DMD-227ENST00000493412 HHIPQ96QV1 700 aa7.33□□□□□ -1.24
DMD-227ENST00000493412 H3BRJ5 948 aa7.32□□□□□ -1.24
DMD-227ENST00000493412 TRPA1O75762 1119 aa7.32□□□□□ -1.24
DMD-227ENST00000493412 CES1P23141 567 aa7.32□□□□□ -1.24
DMD-227ENST00000493412 GIPC2Q8TF65 315 aa7.32□□□□□ -1.24
DMD-227ENST00000493412 FAM46AQ96IP4 442 aaKnown RBP7.32□□□□□ -1.24
DMD-227ENST00000493412 ASB16Q96NS5 453 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms